Efoe001589.2
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- pnr
- Assembly
- GCA_963556455.1
- Location
- OY747095.1:26076550-26083701[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-18 3.2e-14 53.4 4.1 1 35 19 52 19 53 0.97 2 2 6.9e-18 2.9e-14 53.6 6.3 1 34 87 119 87 121 0.98
Sequence Information
- Coding Sequence
- ATGGTCCATTGGCGAACAGATGGCGGTCTGGAATCATATGAAGAGGGACGGGAGTGCGTTAACTGCGGCGCCAATAACACCCCGCTGTGGCGCAGAGACTCCACGGGGCACTACCTGTGCAACGCTTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTCGTGAAGCCCAGCAAGCGGCTGAGATGGATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCGGCGGCACGGCGTCACGGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGACGCAACAACGAGGGCGAGCCCGTCTGCAACGCTTGCGGCCTCTACTACAAGCTGCACGGAATCAATCGGCCATTAGCTATGAGAAAGGACGGCATTCAAACAAGGAAAAGAAAACCGAAAAAGTCTGCTAATGGTGCTAAATCCACACAAGAAAGTTCCAAGAAAGAAGGACAATGTTCCCCTGGCGTAGATGAAAGCAAACCGAGCGTTTCTGAAGTGCCTCTGCCTTTAACGGCGTCCATGTCTAGTCACGGGTCTATGTCGAAGGGGCGCACCGAGGCGCATTCGTCGGAATCGTCCCCTCACGCGCACGTCCACGGCCAGGCGCATGGACATGCGCACGCGCAGTATCCCCTCGGCCTGCCCGCAACACCTAGCTTCCTCTCCAATCCATCGATCTTCAATATTAAGAGTGAGCCGAACGCGCCCAACGGCTACGACGGATATGGGGCTCACACCGGTAGCCACTACCACTCGCAACAGCATTACTTGCACGCATTACAGTACGGTCTCGGCAACAGCGAAGAAGAGGAAGGGAGCGGGTTCTTGCACCAACGCAACGTGACCGCACACGCCAAGCTCATGGCCTCCACGTAG
- Protein Sequence
- MVHWRTDGGLESYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLRWMSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGAKSTQESSKKEGQCSPGVDESKPSVSEVPLPLTASMSSHGSMSKGRTEAHSSESSPHAHVHGQAHGHAHAQYPLGLPATPSFLSNPSIFNIKSEPNAPNGYDGYGAHTGSHYHSQQHYLHALQYGLGNSEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00658022;
- 90% Identity
- iTF_00658022; iTF_00156862;
- 80% Identity
- -