Efoe037615.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747121.1:2154417-2182257[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.058 4.6 9.1 0.5 1 23 227 250 227 250 0.98 2 10 2.2 1.7e+02 4.1 0.1 2 23 258 279 257 279 0.94 3 10 0.024 1.9 10.3 3.2 1 23 283 306 283 306 0.97 4 10 0.82 66 5.5 2.8 2 23 311 332 310 333 0.94 5 10 0.0011 0.088 14.5 0.0 1 20 336 355 336 357 0.96 6 10 0.00096 0.077 14.7 0.5 1 23 1576 1598 1576 1598 0.99 7 10 8.2 6.6e+02 2.3 0.0 3 20 1607 1624 1606 1626 0.91 8 10 0.0015 0.12 14.1 1.6 2 21 1637 1656 1636 1660 0.91 9 10 0.0011 0.089 14.5 0.0 1 23 1665 1687 1665 1687 0.98 10 10 3.9 3.1e+02 3.3 0.2 3 11 1699 1707 1698 1710 0.87
Sequence Information
- Coding Sequence
- ATGTTCATGGAAGGTAATTCCTCTGGAATTGTACTGTTGTCAGTGGCGGATTTGTCCCAAGGCCCAGTAGTCCCAGGCCTAGGGCTGCCAATTGTGACAAAAATTATAGCTGAGGGAGCTGAGACTGCTGGGTGGGTGGCCAAGACTGCAAATCCGCCACTGTACTCTCGTGTTTTGTTACAGTCGGAGCCAACTAAGAAGGTTGTTTGCTTTGAATGCCATAGTTTCCTGAAGAGGATAGAGATATTCCGGCAGCAGGTGCTTCGGAGCTTCCAGAGCTTGGAGGCTGAGGAGAATGCTACAACACTGGCCCATAACTCTgacaaacttaaaaataaatacaacttaACTCACAAAAAAACCGTAAACATATATCTTCCACCAGCGAAGTATGTCCCGGAAAAATGGCAACCCACAAATGTTCCACTACATATAAGCAAGACTTTAGTGAAAAAAGAAGTGGAGTCCATGGAACCTGCATTGGCAGTGGTTAAAATCAAGGCGGAACCGTTGGAGGTtgaaaaggaaaaaattgaGATTGAAGTTCCTGCCCAACAGCCAGAAGTGGTTAAAGACAAAAACACGAACCTGGCAGTTAGGACGGTGACCTTAACGAAAGAAGAGCTTATGCTAGAGCGGCTCAAACAGGCACAGTCACCCTCCTACTTAAAGCTACCATATCGCTGCGAAAGCTGCGTCGTCGGATTCAACTATCAGGAGAACATTCGAGATCATATCAAGAGGAAACATGGGCcgAAGGTGGGCAGCGTGACGTGTGACGTGTGCTTGGCCGTGCTGCATCCGCCGGGCAGTCTCAACGCACACATGTTTAGACATCTTACGAGATATGAGTGTGTGAAATGCGACAAACGGTACTCAAACTATGACGACACATTGCAACACCATAAGAAAGAGCACGGCGACACGCTGCGGTGCGCCGAGTGCCTCTACAGTACTGATTCACCGCAGAAGTTCAGAAAGCATAAACGTTTGCACCACAAGCGCTTCACTTGCAAGGACTGTGGGGTAGTTCTGGCCACTAGACCCAGTCTCACCAGGCATATGGCTGCATGTAATTTCCTCACATTAGCGGCTGCAAACCGACTTGGCTTACCATTACATAACTGTAATCAAACTATTAATGGTATCGGAGTGACCACCACAGCTACACTTGGGGCAGTGTCATGCGAGATTTTTCCCGCGAGAGGAGAAGGCTTGAACAGATATCAAGTTGAGGCTTTCGTTTTACCCCAAATCTGTTCGGACATGCCATTGGGTCCAATTGATATTTCGACTTGGGATCATCTTAAGAATTTAGTTCTTGCTGACCCACGCTTCTTTGAGCCAGGGCCCATTGACATGTTAGTCAATGTCAGTTTTTTATCGTCAGTGCTCCAACCTGGCCTTGTAAAAGGTGAGTCGGGTCACCCCATTGCACTCAACACTGTGTTTGGGTGGCTAGTAATGGGTGATTGTGCTGTTGACATTGATTATTCTCGTTGTCGTTCTCGAGACAATTCCAAGGTTGCTTCCTTGGATTGTCATATCGTTTCGTCGTTGTCTCAGGACAATAATCGCAAACAGTTTGCAGGAATGAAAAATGTCGTAACTCCTCAAACAGCTGTTTTATCGTGTCGTTCTCCTGGCGATTCTTGCCTCGTTGCCAAGGATTGTCTTCTCGTTTCGACGTTATCTCTGGACAATGATATTAGGCGGTTCTGGGAGGTAGAAAGTGTCGTGACTCCTGAATCGGGCTTTTTGTCGAAAGATGACTTATCGTGTGAAAACCTTATGGGTGCTGAATATTATCGAAATCCTGAAGGGAGAATGGTTGTGCCATTGACTTTTCGGAACCCCAAGGATAAGCCCCGGTTTTCTAGCTCTCGCGAAATTGCACTCAagcgatttttaaatttggagaGGAAGTTTAACATAAATCCTCAATTTCGGACAGCATATGTTAATTTCATGAAGGACTACTTGGAGAGTGGTCATATGGAAGTGGTGGAAGCCCCGCCATCGAGAGAGGGCCCCTTTTTTTACATCCCACATCATGGGATCTTACGTCCTGACTCATTTTATACACCTATGCGCACGGTCTACGACGCTAGTGCCAAGGACAGCGAAGGACGCTCACTGAATGCCACCTTGTTACCGGGACCGAAATTgcaaaagaatatttttgatttgTTACTCAGATTTCGCTGGCATGCTGTAGTATTCACTGGAGATATAAAACAGATGTATCGTCAGTTCCTCGTTGATAGAAAGGACTGCGATTATCAGCACATCTTGTGGCGGCCAACTCCAGCTGAACCTGTCCAGGACTTCCGTTTGCTGACGGTAACGTACGGGGTCTCCTGTGCACCCTACCAAGCGTTATGGTGTATCTCGAAGCTCGCTCAAGAGTTCATGGAGACTGCTCCTCTCGGTGCTTCAGTTCTCGATAGGGACACCTACGTCGATGACATTGTGTCAGGTGCAGATTCTGTAGAGGGTGCTGTTCGTATTCGTGATGAGTTGATTAAGATTTTGTCTTCAGCACGACTACATTTGAGGAAATGGACATCTAATAGCCCGGGCTTCCTTCAGGGTTTGTCGGACTCCGACCTATACTCGGAGCAATTTCGTAATTTCGAGGACGTTCATGACGTTTCATTGAAGATATTAGGGCTGCAGTGGGATGAAGATGTCCCAGAACGCATCGCAGAAGAGTGGCTCAAATTGAAATCTCAACTGTCGTGCTTGAGCTCTCTCTCTATTCCTCGCAGAATGATGGCATCGTTTCGTGAGATTCTACTCATCGGCTACTGTGACGCTTCGGAACGCGGTTACTGCGCGGTAGTTTATTGTCGTGTGGTCAAGGATGACCAAGATATCATCGTGCGCCTTTGTTGCGCAAAGTCAAAAGTAGCGCCACTCCGTCGATTGTCGATCCCTCGACTGGAACTTCTAGCCGCAGTGTTGCTGTCTGACCTTGTTGCAGCAGTTCGTCATGCGCTCAAGGATGTTTGCTATGAAGCTAAAGTCTACGCCTGGTCTGATTCGACTGTCGTTCTGACTTGGATAAAATCCTGTCCGTCAAGATGGAAGACCTTTGTAGCTAACCGGACAGCGATGATCCAAGACAGGATTGCTCCCGATTGTTGGCATCATGTCCCCACTACCGACAACCCAGCAGACTACGGTTCTCGTGGCTTATTTCCAGCTGATTTAGTGCAATGTGAATCATGGTGGGCGGGACCTGCTTGGTTGCTGTGCGATGAAAGAGATTGGCCTCGATATGTCATCCAAATTGACGGAGCTGCATTAGAAGAGGAAAAGGTTCTGACCCTGTTCAGCGCCCAGAACTCTAACTTCATCGATAGCATTTTACATCGTTTTTCTTCATTTCGTCGTATCGTCAACATATTGGTGTATTGTTTTCGTTATCTACATAATTTGAAGAATCCATCTCAGAGGATAACTTCAAGACCTTTGTCGGATGAAACAAATGGTGTCATTCGATTTCTCGTTAAACATGTCCAAGAGCATGTTTTTGCGACTGAAATCCGAATGATACACAAAGGTGCCACCAACTCACTGCACAAACCTCTCCGCAAACTTTGTCCGTTTGTTGATCGAGAGGGTTTGTTGAGGGTGGGCGGTCGGTTGTCTCGTAGTGACACCTTTACTTACGATACGAAACACCCCATGCTACTGCCTCGTGAGCATAGGCTGACGGCGTTGGTGATCGAAGAATACCATCGCAGGTTCTCCCATCCGGGGTTGCAAACGTTACAGAACCTTATCTCTCAGGACTTCTGGATCCTCTCCTCGAAACGTGCCATCCATGCCGTCATCTCGTCTTGTCTCAAGTGCTATAGGGTGCGTCCACATGTAGCATCACCTCCCCTCATGGGAGATTTGCCCCCTTTTCGTATCAGCCAGTTAAAACCATTCTCATCATCGGCTGTAGACTTCGCAGGTCCCTTCAATATTGCGTTAGTACACTTAGAACTCGTTTCGGAGTTAACGTCTGAAGCGTACCTCGCCGCGCTTAGGCGTTTCGTCGCTCGTCGAGGTCGCTGTTCTCGTTTGGTATCAGACCAGGGGAGAAACTTCGTAGGCGCTGCCAACATACTCAAAGAGCTGATGTCGGAGGCTTCCCAGAAAGAGCAGATTGAGTTCGTGTTCAATCCTCCGGGTAGTCCTCATTTCGCCGGTTTGGCGGAAGCAGGAGTGAAATCGGTGAAGACGCATTTGTTTCGAATAATCGGTCTACAACGCCTCACCTTCGAGGAATTCTATACCGTGTTAACGCAAGTAGAAGCAATTCTTAACTCGCGTCCATTGTCGCCCCTGAGCGCTGACCCTAATGACCTCGCTGTATTGACCCCAGGGCACTTTTTGACACTAGAGCCATTGACTATTCTCCCTGAACCTATACTAACTGAAGTAAAAGTCGGTCCTCTCCAACGTTGGAAACTACTGCAACAGATGCACCAACATTTTTGGCGTAAATGGCACTTGGAATATCTCCATACGCTCCAACAGAGGAATAGATGGCCTCTCAAAGGAGAGAACCTCCAAGAGATCTCCCAGCAGCCGCGTATAATCAGGTGGCAGGTAATCTTTGGACGGCGGGTAAGTCTGTACAGTACGAGCCAGTCCCCAAGGACCCTACACCTGACGAAGGAGTGCGGCTACATCTCCAGGCAGAGCGTGCTGCACAAGAAGCGGCTGTACCGCTGCGTGCACTGCGCGCGCACGTACACGGACGGCGCGCAGTTCGCGGCGCACATGCGCGTgcacggcgcggcggcggcgcgcgcggcgtgcGGCGCCTGCGGCGTGCAGTTCAAGGCGTGGCACGCCTACAACGCGCACGTCTTGTACAGCACGGCGCACTCCAACCAGCGCAAAATAACCTGTAGCCACTGCGGCATGAAGTTTGCGACGGCAACGCATCTCCGCATGCATGTGCAGTTCAGCGACCATCCCAAACAGAAATTCCCCTGCCCAGAATGCCCCAAGGAGTTCGCAGTAGAAGTGGAGATGAAGCAGCACCGCAATGTACACAAGAAGCAGCGGCTGAAGTCCACAGACAGGATATGCGACTACTGCGGCCGCGTCTATACTGTACCGTTTCCAACGGGCTACCCCTCGTTCGTGCCGCGCGCCGCGCTCACGATCCCTCACATCTTCCTGCATTTGGCTCCTTCCACCATACCAGGCAGAATACCAGAACTTCATTTCGCATATGACCGGAGACTCAAATTACCAGACCAAGGAATCGCCGCATAG
- Protein Sequence
- MFMEGNSSGIVLLSVADLSQGPVVPGLGLPIVTKIIAEGAETAGWVAKTANPPLYSRVLLQSEPTKKVVCFECHSFLKRIEIFRQQVLRSFQSLEAEENATTLAHNSDKLKNKYNLTHKKTVNIYLPPAKYVPEKWQPTNVPLHISKTLVKKEVESMEPALAVVKIKAEPLEVEKEKIEIEVPAQQPEVVKDKNTNLAVRTVTLTKEELMLERLKQAQSPSYLKLPYRCESCVVGFNYQENIRDHIKRKHGPKVGSVTCDVCLAVLHPPGSLNAHMFRHLTRYECVKCDKRYSNYDDTLQHHKKEHGDTLRCAECLYSTDSPQKFRKHKRLHHKRFTCKDCGVVLATRPSLTRHMAACNFLTLAAANRLGLPLHNCNQTINGIGVTTTATLGAVSCEIFPARGEGLNRYQVEAFVLPQICSDMPLGPIDISTWDHLKNLVLADPRFFEPGPIDMLVNVSFLSSVLQPGLVKGESGHPIALNTVFGWLVMGDCAVDIDYSRCRSRDNSKVASLDCHIVSSLSQDNNRKQFAGMKNVVTPQTAVLSCRSPGDSCLVAKDCLLVSTLSLDNDIRRFWEVESVVTPESGFLSKDDLSCENLMGAEYYRNPEGRMVVPLTFRNPKDKPRFSSSREIALKRFLNLERKFNINPQFRTAYVNFMKDYLESGHMEVVEAPPSREGPFFYIPHHGILRPDSFYTPMRTVYDASAKDSEGRSLNATLLPGPKLQKNIFDLLLRFRWHAVVFTGDIKQMYRQFLVDRKDCDYQHILWRPTPAEPVQDFRLLTVTYGVSCAPYQALWCISKLAQEFMETAPLGASVLDRDTYVDDIVSGADSVEGAVRIRDELIKILSSARLHLRKWTSNSPGFLQGLSDSDLYSEQFRNFEDVHDVSLKILGLQWDEDVPERIAEEWLKLKSQLSCLSSLSIPRRMMASFREILLIGYCDASERGYCAVVYCRVVKDDQDIIVRLCCAKSKVAPLRRLSIPRLELLAAVLLSDLVAAVRHALKDVCYEAKVYAWSDSTVVLTWIKSCPSRWKTFVANRTAMIQDRIAPDCWHHVPTTDNPADYGSRGLFPADLVQCESWWAGPAWLLCDERDWPRYVIQIDGAALEEEKVLTLFSAQNSNFIDSILHRFSSFRRIVNILVYCFRYLHNLKNPSQRITSRPLSDETNGVIRFLVKHVQEHVFATEIRMIHKGATNSLHKPLRKLCPFVDREGLLRVGGRLSRSDTFTYDTKHPMLLPREHRLTALVIEEYHRRFSHPGLQTLQNLISQDFWILSSKRAIHAVISSCLKCYRVRPHVASPPLMGDLPPFRISQLKPFSSSAVDFAGPFNIALVHLELVSELTSEAYLAALRRFVARRGRCSRLVSDQGRNFVGAANILKELMSEASQKEQIEFVFNPPGSPHFAGLAEAGVKSVKTHLFRIIGLQRLTFEEFYTVLTQVEAILNSRPLSPLSADPNDLAVLTPGHFLTLEPLTILPEPILTEVKVGPLQRWKLLQQMHQHFWRKWHLEYLHTLQQRNRWPLKGENLQEISQQPRIIRWQVIFGRRVSLYSTSQSPRTLHLTKECGYISRQSVLHKKRLYRCVHCARTYTDGAQFAAHMRVHGAAAARAACGACGVQFKAWHAYNAHVLYSTAHSNQRKITCSHCGMKFATATHLRMHVQFSDHPKQKFPCPECPKEFAVEVEMKQHRNVHKKQRLKSTDRICDYCGRVYTVPFPTGYPSFVPRAALTIPHIFLHLAPSTIPGRIPELHFAYDRRLKLPDQGIAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -