Basic Information

Gene Symbol
zfy1
Assembly
GCA_963556455.1
Location
OY747121.1:3057721-3069570[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.044 3.5 9.5 2.7 1 23 218 241 218 241 0.94
2 10 0.00034 0.027 16.1 0.2 1 23 248 270 248 270 0.98
3 10 0.029 2.3 10.0 1.3 2 23 301 323 300 323 0.94
4 10 0.002 0.16 13.7 3.4 1 23 326 349 326 349 0.97
5 10 7.9e-05 0.0063 18.1 0.8 1 23 352 375 352 375 0.95
6 10 0.56 44 6.0 0.1 3 20 384 401 383 403 0.91
7 10 0.00039 0.031 15.9 0.1 2 23 416 438 415 438 0.91
8 10 0.00013 0.01 17.4 0.8 1 23 444 467 444 467 0.98
9 10 0.00058 0.046 15.4 0.6 3 23 478 498 477 498 0.97
10 10 0.039 3.1 9.6 0.0 2 23 505 527 504 527 0.92

Sequence Information

Coding Sequence
ATGGAGCCCGAAGAAATTAAGCTTGAATATAAACTAGATAATTTTCAATGCCATACATGCCTAACTTATGGCCGTAAACTTTCGCCTTTAGGTAAAAATGCGAATATATTTAGACAAATAGCACCACGAACCGGTTACTGGATGAACTGCAATATGGATACAGTGAAAATTTGCTGGGAGTGTAAAAGAGTGTTATCCAAATTAGTTGCTTTCCAGCATCAAGTGCTCAGGGCTACAGAACTTATACAAATGGGGCAGgcgTATGGAACCTTGTCAAGTCTAACCACAATAATATTCAATGACACTAGTCCTAATACTATCTACATCACACAAACAAAGGAAGCaacacacacagacacaaaATCCGAAACAGATGACATCGACAATGAGACTGGCCATATTTCAGATGTCATAGACAACACTGATGAGATAGAACTGCTAAAGACTGAATTGGACATAGATGATAAAAAGATGAAAACTGTGAAAGTTAAAAGTAATAAATGGGCTTTGAAAAGGgcattgttaaataaaaaacctaaatttaaaataataagtgataataaaatatttagaaaggTTAGAATAAGTGCTGAAGAACTAAGTGGCTGTTTGGAGAAAGAGAGATATAGCGAATTTTATAATTCATGTAATTTCAAATGTGAAAGCTGTGTGCTTGGATTTAAGGATCAAAATTCCCTGGCTAAACATTTTGACAAATGCCATAGTGAGtcTGTAGGCCCATACACCTGCGACATATGCAACACTCGGTCGCCCAACAAGACTTCACTGGCCGCCCACATATCTAACCACTACTACGTGTACGAGTGCACGCTATGTGCGTTCGCGAGCCGCCACGGCACGCGCCGGCGCGTTCATGCGAGAACGCATAAGACGGTGTTGCAGTGCGTTAAATGTGAACTGAAGTTTGGGTCTCGTCGAGAATTCTTCAAGCACTACAAAGAATGGCACGAGAGGTTTATCTGCGAGCATTGCGGCGTCAGCTTCAAGATGCGGTACTGCATCGAGGACCACATCAGGAAACAACACTCGCCGTTTGAATGCAAGATGTGCGACAAACGCTTTACTCGATACAATGGATTGTGGTTGCACAATAAGGTGTGGCACAGCGAGTCGTCGCAAGGCGCGTACTGCGTGGAGTGCGACCGGCGGTACGCGGACGTGTACCGGTACCGCTGGCATCTCAGCAACAGCGCGCGACACCGGCCCCGCGCCAAGCTACGGATACCGTGCCCCGGCTGCGACAAGGTATTCACAAAGAAGATCTACATGAAGGACCACTATGATCTTGTACATTTGAAGAAATACAAGTACCGATGCGAGCAGTGTGACAAGAACTTCCTCCGCAACGCGGACCTGGTCCAGCACCGGCGGAGGGTGCACGAGGGGCTCCTCCCGCCGAAGAACAAGATTTGCTACATGTGCGGCCGGGGGTTCACCACAAACAAGATCCTGAACAACCACGTGCGCACGCACACGGGCGAGCGGCCGTTCTTGTGCGCGCGCTGCCCCGCCGCCTTCGCGcagcgcgccgcgctcgcgcagCACGCGCGCGCCCgccacgcgcacgcgcacgccaCGTGA
Protein Sequence
MEPEEIKLEYKLDNFQCHTCLTYGRKLSPLGKNANIFRQIAPRTGYWMNCNMDTVKICWECKRVLSKLVAFQHQVLRATELIQMGQAYGTLSSLTTIIFNDTSPNTIYITQTKEATHTDTKSETDDIDNETGHISDVIDNTDEIELLKTELDIDDKKMKTVKVKSNKWALKRALLNKKPKFKIISDNKIFRKVRISAEELSGCLEKERYSEFYNSCNFKCESCVLGFKDQNSLAKHFDKCHSESVGPYTCDICNTRSPNKTSLAAHISNHYYVYECTLCAFASRHGTRRRVHARTHKTVLQCVKCELKFGSRREFFKHYKEWHERFICEHCGVSFKMRYCIEDHIRKQHSPFECKMCDKRFTRYNGLWLHNKVWHSESSQGAYCVECDRRYADVYRYRWHLSNSARHRPRAKLRIPCPGCDKVFTKKIYMKDHYDLVHLKKYKYRCEQCDKNFLRNADLVQHRRRVHEGLLPPKNKICYMCGRGFTTNKILNNHVRTHTGERPFLCARCPAAFAQRAALAQHARARHAHAHAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00290081;
90% Identity
-
80% Identity
-