Basic Information

Insect: Epiblema foenella
Gene Symbol: -
Assembly: GCA_963556455.1
Location: OY747122.1:6346901-6355428[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.034 2.7 9.8 5.3 1 23 453 475 453 475 0.97

2 9 4.8e-06 0.00038 21.9 5.2 1 23 521 543 521 544 0.95

3 9 0.0071 0.56 12.0 0.0 2 23 550 571 550 571 0.97

4 9 4e-05 0.0032 19.0 2.3 1 23 577 599 577 599 0.98

5 9 0.011 0.84 11.4 2.1 3 21 606 624 605 626 0.96

6 9 2.2e-06 0.00018 23.0 1.5 1 23 635 657 635 657 0.99

7 9 2e-05 0.0016 20.0 0.8 1 23 663 686 663 686 0.94

8 9 0.0025 0.2 13.4 5.5 1 23 692 715 692 715 0.97

9 9 0.0015 0.12 14.1 2.8 1 23 723 746 723 746 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.034	2.7	9.8	5.3	1	23	453	475	453	475	0.97
2	9	4.8e-06	0.00038	21.9	5.2	1	23	521	543	521	544	0.95
3	9	0.0071	0.56	12.0	0.0	2	23	550	571	550	571	0.97
4	9	4e-05	0.0032	19.0	2.3	1	23	577	599	577	599	0.98
5	9	0.011	0.84	11.4	2.1	3	21	606	624	605	626	0.96
6	9	2.2e-06	0.00018	23.0	1.5	1	23	635	657	635	657	0.99
7	9	2e-05	0.0016	20.0	0.8	1	23	663	686	663	686	0.94
8	9	0.0025	0.2	13.4	5.5	1	23	692	715	692	715	0.97
9	9	0.0015	0.12	14.1	2.8	1	23	723	746	723	746	0.94

Sequence Information

Coding Sequence: ATGTTGCACAACAGTGGGCCTTACGGGCCAAATGACGTACCTATAAACATGGGAATGCCCGTGAATATGAGCCAAATGTCGAACCCTATGAACTTAGGAAATAACTTGGGTAATTTGGCTAAAGTGCCGCAGCAAGCGCCTCAAGCGTCGGCCCCTCCGTACGATATGCCGGATTACTCGTCCTATGGCCATCCACCGTTAAATATGGGGCCACCTATGAGTCCTTTTGCAAACTATCATCACGTAAATTTTCAAGCTAACTACGGCCATCCTAGTCCTAATTTGCCGTTTGATCCGACCCCGGGCAGCGTTCAAAACAGTACGCTACCCATGAACCTGAATATTCAAAGTGATAATCGACCGAGTTTGACGAATTACCACAATTTTGAAGGCAAAAAATTTGACTTAAACAATGCACACTACACCGAGAGTTTAAATCgtaaaatacctataaatatCCCTCAAATACATACTAAAGCGTTCCATAAGCATGTGGGAATGGACACAAATTATCAGTACAATAATTCTGTACAAGAAAAGCCATTGTACAGCCATGACTTACCAAAAACACCTGAAAGATCTATAATTGACAGCAGCAGAAGAAAAAGCTTAGAAAATACagttaaacttattgaaaatattcTTATAAATAGTACaccaaaagaaaatttaaaaaactcgaATAGTGCACAGTCATTTTTGGATAATTCAAGCAATGTGACCATGGATGTGGCAAACGAATTACAAAACACTGAAGCAGACAATACTAAAGAGCAGAAGAGCACAAATGTCAATTTAAGCCATAGCACACATAATCCCAATATCAATATACACTTAGCAAATAAACAAAGCACCAactctgaaataaaaaatacaacagACATCCATGACTTCAGTCCAAATCGGAGTAGTAAAATCCCAAATCAACTTACAGATTTAAAAATGGGACCACAAAATACTGGTATAACCAATAGTGTATCTAAAATCCATAACAAAAACTCGTCAACATCTATAAATTTAAGTATCAAGTCAAATACAGAACAGAAACAAAATTCAATGAAAATACAAAGTGAAATACATTGTGAACCACTAAGACGGAGCCTTATAAACCCCGTAAAATCTAAAGGACAAAAGAAGGAAACTGAGAAAATAAAAGAACCAATAGAAGACATCAAGAAAGAAGTAGAAGATGTTGAAGTGAAGGTGGAGCCGCTGGGATGGGACGATGTACCATTTCTTAGGGACAGTAACGCTGTATGTAGAGATGTCATTGAAGCTGATGCAGTAATTGTGGAAGAGAATAATGTGGCTGAGGCACAGCAAGCTATGAAGAAGGGCTCAAATACGAAGACCTATTATGAATGCACCCACTGTAAAATGATCTTCAAGCACCCGAAGAGGTTCCTTATACACACCAAATGGCACTCGTTCGGGCAGACCAACGAGAAACTCCACGAGCTGGCCAGAGAGAAAGACCTGAAGAAAAGTATGAAGAAAGAGGCGAGGACTATAGAAAGATTGCACTCCAAAGAAGTGAAAGAAGCCGCAGAGGGCGATGTGCACCCGTGTAAAGACTGCGACAAGGTGTTCACAGTGAAGAGCAGCCTTAAGAATCATCGTCAGAAGCACCATCCGACCCGTGTTCGGGAATGCAAGATCTGCAAGGTATCCGTAGTGGGTTGGATGCAGTTGCGCGCTCACATGGCGGTCCATGCGGGGGGCGCCGGGTACCAGTGCGTCGAGTGCCCCAAGCGGTTCAAATACGCTCACTCGCTCGCGAAACACAAGGACACGCATCTGGAGAAAACCCACGGATGCGAGCAGTGCGAGAAGAAGTTCGGTTCCCAAGCGTTACTCAAGATGCATATGAAGTGTCACGAGCGAACAGCCAGGGGAGCCACTTTCAGGTGCACTTACTGTGGGAAAGGATTCTTCGAGAGCTACAACTTGCAGGTACACGAGCGAACACATCGAAACGAACGTCCGTTCCTTTGCGAAATCTGCAAGACCAGCTTCGGTACAAATTCGAGTCTCAAGAGGCATGTCAAAGTCTCACACAGCACCCTAAAGCCTTTCTCCTGCCCGACATGTCACCGTTGTTTCGCTTCGTCAACTACTCGAGCGCGACACATGTCGCGGTCACACGGCGACTCTGTCGAGCTTCCTCACGCGTGTACCGTGTGTCAGCGTAGATACAGAACGCTTAAAGAGCTTCAGAAACATGTGAGCAAGTCTCATCCGGAGAGAAAGCAGTGA
Protein Sequence: MLHNSGPYGPNDVPINMGMPVNMSQMSNPMNLGNNLGNLAKVPQQAPQASAPPYDMPDYSSYGHPPLNMGPPMSPFANYHHVNFQANYGHPSPNLPFDPTPGSVQNSTLPMNLNIQSDNRPSLTNYHNFEGKKFDLNNAHYTESLNRKIPINIPQIHTKAFHKHVGMDTNYQYNNSVQEKPLYSHDLPKTPERSIIDSSRRKSLENTVKLIENILINSTPKENLKNSNSAQSFLDNSSNVTMDVANELQNTEADNTKEQKSTNVNLSHSTHNPNINIHLANKQSTNSEIKNTTDIHDFSPNRSSKIPNQLTDLKMGPQNTGITNSVSKIHNKNSSTSINLSIKSNTEQKQNSMKIQSEIHCEPLRRSLINPVKSKGQKKETEKIKEPIEDIKKEVEDVEVKVEPLGWDDVPFLRDSNAVCRDVIEADAVIVEENNVAEAQQAMKKGSNTKTYYECTHCKMIFKHPKRFLIHTKWHSFGQTNEKLHELAREKDLKKSMKKEARTIERLHSKEVKEAAEGDVHPCKDCDKVFTVKSSLKNHRQKHHPTRVRECKICKVSVVGWMQLRAHMAVHAGGAGYQCVECPKRFKYAHSLAKHKDTHLEKTHGCEQCEKKFGSQALLKMHMKCHERTARGATFRCTYCGKGFFESYNLQVHERTHRNERPFLCEICKTSFGTNSSLKRHVKVSHSTLKPFSCPTCHRCFASSTTRARHMSRSHGDSVELPHACTVCQRRYRTLKELQKHVSKSHPERKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00290010;
90% Identity: -
80% Identity: -