Basic Information

Insect: Epiblema foenella
Gene Symbol: -
Assembly: GCA_963556455.1
Location: OY747119.1:7783785-7785674[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.6 7.6e+02 2.1 5.1 2 23 95 117 94 117 0.89

2 14 0.0099 0.79 11.5 0.1 2 23 140 161 140 161 0.95

3 14 0.00018 0.014 17.0 0.5 1 23 183 205 183 205 0.97

4 14 0.00089 0.071 14.8 1.6 1 21 209 229 209 230 0.94

5 14 0.001 0.083 14.6 2.9 1 23 306 328 306 329 0.95

6 14 6.9 5.5e+02 2.6 0.3 2 23 352 373 352 373 0.92

7 14 0.022 1.7 10.4 4.5 1 23 396 418 396 418 0.97

8 14 0.00071 0.057 15.1 0.8 1 23 422 444 422 444 0.98

9 14 0.00024 0.019 16.6 1.4 1 19 449 467 449 472 0.95

10 14 0.042 3.3 9.5 0.4 1 23 481 504 481 504 0.88

11 14 0.0022 0.17 13.6 1.0 1 23 511 533 511 534 0.95

12 14 0.00051 0.041 15.6 2.9 1 23 540 562 540 562 0.96

13 14 2e-06 0.00016 23.1 0.9 1 23 568 590 568 590 0.99

14 14 0.00013 0.01 17.5 4.6 1 23 596 618 596 619 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.6	7.6e+02	2.1	5.1	2	23	95	117	94	117	0.89
2	14	0.0099	0.79	11.5	0.1	2	23	140	161	140	161	0.95
3	14	0.00018	0.014	17.0	0.5	1	23	183	205	183	205	0.97
4	14	0.00089	0.071	14.8	1.6	1	21	209	229	209	230	0.94
5	14	0.001	0.083	14.6	2.9	1	23	306	328	306	329	0.95
6	14	6.9	5.5e+02	2.6	0.3	2	23	352	373	352	373	0.92
7	14	0.022	1.7	10.4	4.5	1	23	396	418	396	418	0.97
8	14	0.00071	0.057	15.1	0.8	1	23	422	444	422	444	0.98
9	14	0.00024	0.019	16.6	1.4	1	19	449	467	449	472	0.95
10	14	0.042	3.3	9.5	0.4	1	23	481	504	481	504	0.88
11	14	0.0022	0.17	13.6	1.0	1	23	511	533	511	534	0.95
12	14	0.00051	0.041	15.6	2.9	1	23	540	562	540	562	0.96
13	14	2e-06	0.00016	23.1	0.9	1	23	568	590	568	590	0.99
14	14	0.00013	0.01	17.5	4.6	1	23	596	618	596	619	0.95

Sequence Information

Coding Sequence: ATGTGGTTACTACCATTCCTCAAAATCATTAGCTTACACCCGAGATCACTCGTGATTTCCATTCAAGGATGCCCCAGCCTGCTATTATCGTTAAGtagatttcttttatttttaggaCAGAAAAACGAGGAGGCCAATCAGCCTAAAAAGGATTTGCCCGCAGCAGAAGATACTAAGGACTCCCAATGGCGCACCAACTTAAGGAACAATCTTTCTCTTATCGTAGATATGACTACAGTATACCCCTTCAAGTATTCTGCAAACCGACAAGGTGCATTGTTTCTCTGTTATTTTTGCAAAGACACCTTCTTCACTTCGACGGAATTGCGAAACCACAGTTGCAATCAACACACTAGAGTTGAAAACTTACCAAAGCTTAAAGGTTACCGACCTATAAAAATGGACTTCACAGCTGCATCGTGTAAGATTTGTGGATTTCAAATTAGGGACTATGCTATGCTGAAAGCCCACATGGCTGCACACGGTCACCCTCTTAACACGACGCGCGGAGATACCATCTTCCCGTACAACTTGGGTTCCAAAGTACATGTCTGCCAGATATGCAACATCATGTTTGATTCGTTTGTGACTTTGATGAGACATATGATAGTACACTCTGATCGTCATATGTGTAATAAATGTGGAAAAAGGTTAAAATCGTACGCTCATCTCTTAACTCATATCAATTCAAACGAATGCGGCACGTCGTCTGGCGACAATGAATTGGCTGAGATTGATGACACCGGTGCCTCTGTTGAAGCTAAGGCCACCCACAAGCAGTTGGAAGATTCTAGTGATACTAAATCAGCCGCTGATGAAGATGTTGCTGAACAGAAGCGATCCagctttagaaaaaatatattaaccataGTAATGACGACTACGGTATATCCATTTAGATATAAAAGAGGGCTATATCAATGTTTTTACTGCGACAAAACGTTTTTAAAGCCAGAAGAGCTTCGACAACATAACCGTGCTCATCATTACGAAACAAAAGCATGtccaaaatttaaaatgtatgagcCGGTGAAGATGGACTTCATTGATGCTACATGCAGGATCTGCTTAGCTCACATAAATGACTATGAAGCATTAAAGACACATCTAGCTGAACACAACAAAAACATAGACACTACTCATGGTGAGAACGTGATCCCTTACGATTTAAGAAGTGATAATAAACACGTTTGTCAAATGTGCAAAAAATCATACGAGTCTTTCTTGAGTCTACACAAACACATCAACGAGCATTTTGACTCGTACATATGTGATCAATGTggcaagaaaaataaaacaaaccgCCAGCTGATTATTCATCGCCGTATTCACGAGCGCGGAGAGTTCCCTTGCAAAAAGTGTGACAAATCTTTTAATGTCCTTTCTCACCTCTTTGCTCACGATGCCAAAGCACATAGAATCAACGTGGCAATCAACTCGTACAAATGCCCAGTTTGTAAAGAGAAATTCGCCAGTTATAGGGTTAGATTACAACATTTAGCCAAAGCACATGGTTTCAAAACGCCAGAATTTCCTTGTCCCTCATGTGATAAAGTCTTCGACATGAGCGGTAGGAGGACCGAGCATATAAAAACTCATCACTTAAAACAAAGAAATCACGAATGCCagttgtgtggcaataaattTTCTACACAAGCCGGTCTTAAACATCATCTGGTCAAACACGGCGGCGAAAGGATTTACCAGTGTGATATTTGCAAGAAAACTTATGCCAGGATAAAGACATTGAGAGAACACATGCGAATTCATAACGACGACAGGCGCTTCGCTTGTGCCGTGTGTGGGCTGACATTCATACAGAAGTGCAGTCTAAAACACCACTTGAGAGTGCATCATCCTACGCAGTTTAAACAAGAATTTGAATCTTGA
Protein Sequence: MWLLPFLKIISLHPRSLVISIQGCPSLLLSLSRFLLFLGQKNEEANQPKKDLPAAEDTKDSQWRTNLRNNLSLIVDMTTVYPFKYSANRQGALFLCYFCKDTFFTSTELRNHSCNQHTRVENLPKLKGYRPIKMDFTAASCKICGFQIRDYAMLKAHMAAHGHPLNTTRGDTIFPYNLGSKVHVCQICNIMFDSFVTLMRHMIVHSDRHMCNKCGKRLKSYAHLLTHINSNECGTSSGDNELAEIDDTGASVEAKATHKQLEDSSDTKSAADEDVAEQKRSSFRKNILTIVMTTTVYPFRYKRGLYQCFYCDKTFLKPEELRQHNRAHHYETKACPKFKMYEPVKMDFIDATCRICLAHINDYEALKTHLAEHNKNIDTTHGENVIPYDLRSDNKHVCQMCKKSYESFLSLHKHINEHFDSYICDQCGKKNKTNRQLIIHRRIHERGEFPCKKCDKSFNVLSHLFAHDAKAHRINVAINSYKCPVCKEKFASYRVRLQHLAKAHGFKTPEFPCPSCDKVFDMSGRRTEHIKTHHLKQRNHECQLCGNKFSTQAGLKHHLVKHGGERIYQCDICKKTYARIKTLREHMRIHNDDRRFACAVCGLTFIQKCSLKHHLRVHHPTQFKQEFES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -