Efoe035498.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epiblema foenella
Gene Symbol
-
Assembly
GCA_963556455.1
Location
OY747118.1:12845281-12871867[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 8.9e-06 0.00071 21.1 0.2 1 23 828 850 828 850 0.99
2 10 1.9e-05 0.0015 20.0 1.0 1 23 1129 1151 1129 1151 0.99
3 10 0.0057 0.45 12.3 1.1 1 23 1158 1180 1158 1180 0.98
4 10 0.00066 0.053 15.2 3.6 1 23 1186 1208 1186 1208 0.98
5 10 9.2e-06 0.00073 21.0 1.0 1 23 1214 1236 1214 1236 0.97
6 10 6.1e-05 0.0049 18.5 3.1 1 23 1244 1266 1244 1266 0.99
7 10 0.00031 0.024 16.3 1.4 1 23 1272 1294 1272 1294 0.97
8 10 0.00022 0.018 16.7 1.0 1 23 1300 1322 1300 1322 0.98
9 10 3e-05 0.0024 19.4 0.2 1 23 1327 1349 1327 1349 0.98
10 10 7.3e-05 0.0058 18.2 0.2 1 23 1355 1377 1355 1377 0.98

Sequence Information

Coding Sequence
ATGCATTGGTGTCGCTGCTGCCTGCGGTGTCCTGCGGACAGGGACCTGACGACGCCGTACACACATCTAGGCACAACGGAGATATATTCGGACATGCTCAAAGAATGCTTCGATTTAGATATAAATCTGACAGTGGACGATGGGTGGTGCGCGATCTGCTCTGTGTGCGCGGGCCGCCTGCGAGACGCGAGCGACTTCAAGCTGCAAGTGCAGCGCAGCCAGGCGGAGCTGCGGGCGCGGCTGCAGGGAGCTCTGCGGGTCAAAGAGGAAGAACCCGCAGTAGAGCCAGAAACTGAGGATGGAGATGGGAGCAGTGAGGAGTCCGGGTCAGATGAAGAGCCCTCTGTCAAGCCAGAGATGCTGGACATGGATGAGACAGaTGCAGTGCTCAGCTCAGAGATGGCGGCTGGAGCCGTGGCGGGCCGGGTTTCAGATGAAGAGCCCCGGGTGGAGGCAGGGATGGCGGCCGCAGGTGAAGAGCCCCCAGTCAAGCCAGAGATGCTGGACGAAGATGGAACAGATGAAGTGCTCGGGTCGGAAATGGAGGACGGAGACGGGACGAGTGACGAAGATGAGCCCATATCGCgtCACAAAAGGAGGGCTCGAACCAGAAAAGAACCCAAGGAACTAAAATCAAGTCAGAAAACATTTACCGATTCCGAGATAAGTGACAATGATGATTCTTGGCCTCATGGCTATATGCCTTCAAGTGATGCCCATATACCAGGCTCCTTAAATGACACCTTTTTTAACGAGTTTCCACCGCCTGTTACAAGTGAATCTATTCCGAGTGCAAACAGTTTACTTCCTGATCCCGCAAACGAAAACTCATACAATCCCAGTTACATGTCAAATGCAACAGATTTGTTCGAGTCTTTGCCTGATGCATTTCAATCTGCTACTCTGTCGCACAAATCTACTTACATCTTTAATACAACTGACACCGGAGAACCTCCGCTAGAAACTATTGAGCGTTCTGCAAAAGCAAAAGAGCATCGGTCAGAAGCAGATCATGATCTGGAAATAGAAAACCAGTGTTTGGATGGTCGACATGAGGTCGCTTTGAACTGCTGCGAAGAAACAAACATAGCAGAAAAAGAAAATGTTTCGCTAAGAAAATGTAGTTCAGGAGACGATATAGAAGAGGAAAAtgagataaataataaaaatgtagcaGAAGAAAATATTTTGGAAGATAAACGAGGAATAGTACATGCGACTAAAATGGTAGCCCGGTTCAATGAAGTGACACAAAAATTTGGCGCACCAACATACGCGATGAACATTGCAACATCTATAAAACAATGTTGCAATATTGCTTTAATGCAGAGTTGCGAAATGGAAGCCACCGTTGACTCGGCTTCCGTTCAAGCGGATTTAAGAACGCTCTCGAAATTGATCGAGGACAACTGGAAATTCGATATTTCCAGCCAAGCGGTCGACGACCtgaatgtgaaaaaatggaatAAAATCACCATTGTTTCACTAGCTGCCGATTTGAAACTGTTCAAAGATCATCTTTGTGGCATTTCAAAGCAGTCATCTGATGACTTGACTACAGAAAATAGTAATATTCAGGCTTTTAACAATTTGGTAGAGTCTACATACTGCCGCGTGTTCCTTTTCAATAGACGGAGGCCCGGCGAATTACAGCGTTTAAAATTAAACGATTACAATGATCACGGAAAGGATATTAATAAATACGAAGAATTTGATAAAGTTCTTTCTCCAACCGAAAAAATTTTGGTAGATAAATTGAAAACAATTGTAATCCGAGGCAAGAGAGGTAGAGGAGTACCAGTTTTATTTAGTAATGAAATTCAAGATGATATCAAGAAAATATTATCAGCGAGGGACATGCATATCGGAAGTGACAATAGTTTACTGTTCGTGAAGGCAGGAGGCACAGCTGTTTGCGGTTACAAAATATTCGAAAAGTACGCAAAAGCATGCGGAGCCAAAAATTATAGGGCTTTAACATCTACGCGTCTTCGAAAACATCTTGCAACTTTGACTCAATTATTTACCATGACTGATACAGAGCTCGAACAATTAGCTACATTCATGGGTCATACGCTTAATGTTCATAAAAACAATTATAGGCTATCTAGCGACGTTTATCATATCGCAAAGATATTCAAACTGTTACTGTTAATGGAAGATGGAAAGGCATGTATGTATCAGGGTAAGGCGTTGGACGAAATAGACTTGAACTTGGATGAAGAGATTAAAGTAATCGAGACAAAAAATCATGAAGTTACTGAATTCGAATTAGAAGTGTTGCTGGACGGCTGTGCCGGACGGCCCGTGTCCGCCCTGGCCAGCTCGCAGCTCGCCATGACATGTTCCGTGAGGCTCGAGCGCCTCCGCGACGATGAGGCGCCGCACGCGATCCACACGAGCCTCGCGACATTACACGAGTCGAGGCGAGCGAGTCGTATGAAGGAAACCCACGATAACACCGGCACCGCCGAGGAAGCGTACACATGCGATACTTGCGGGGAAGACTTCACAGGGAAGTCGAGTTTAATCGCGCACGTGCGGAGACACCTCGCACAGGACGAGTCCGCGGCGACGTACTCTTGTGGAACATGTTCGGAACAGTTCTCCTGTAAAAACCTCTTCGCTAGACACGAACATGCTCACACAGGTATTGGAGTTATTGCCGCGGTTCTGACGGACATGTCACTGGAGCCAGCATGTATCAGGGAGGAGTCCGGTGTGAAGACAGAGCCCAGAGTGGAGTGTGTAGAGATTGCACCCGGAGTGTGCTTAAAGATAGAGCCTGTAGAGGAGTGTGTGAAAACAAAGCTCGAATTTGGAAGGGTGGAATTTGTGAAGGCAGAGTCTGGAATGGACTGTGTCAATGCAGAGCCTGAAGTGGAGTGTGTGAAGACAGAACTAGGACTAGTGTGTGTGAAGACAGAGCCTGGAGTAGAGTGTGTAAATGCAGAGCCTAGAGTGCAGTGCGTCAAGACAGAACTAGGACTGATGTGTGTGAAGACAGAACCTGGAGTGGAGTGTGTAGAGTCAGAGCCTGAAGTGGATTGTGTGAAGACAGAACCTGGAGTAAAGTGTGTGAAGTCAGAGCCTGAAGTGGATTGTGTGAAGACAGAGCCTGGAGTGGAGTGTGTGAAGACAGAGCCTGAAGTGGATAGTGTGAAGACAGGGCCCGGAGTGGAGTGTGAGGCGGCCACATGGGCTGGCCTGTATGAAGAACACCAAGTCAAGGACGAGCTGGTGCTCAGCCCCGAGGAGCTGCAACACCCGCGAGCTGGTGCTGTTTCAGTTGTACTGGACAGTTGTGCCGGAAGTCCTGTCGAACGCCAAGCGAGTCGTACAAAGGAAACCTATGGCACCGTAGGGCTCCGCGCGGAGGAAGCGTACACATGCGATACTTGCGGGAAACACTTCACAGGGAAGACGGGTTTAATCGTGCATGTGCGTATGCACCTGGCATCCGCAGCGACCTACTCTTGTGGAACATGTTTAGAACAGTTCTCCAATAAAAGACTCTTCGCTAGACACACACGTGCCCATACAGGTCAGAAAACCTACTCCTGCGATATGTGTAACAAACAATTCAAGTTAAAGGCTCATTTAGTCAAGCATTTCAAAATACATACTGACATGAACCAGTATTCGTGCGGAGTTTGTAGTAAAACGTTTAGAAGGAGCTCGTACTTAAAACAACACGCGCTAATTCACATGCCTTCCGGATCCAAGCCATACACCTGCGAAGAATGTGACAAGCAATTTGCGCTAAAATCTTATTTTAACAAGCACAAAAAAACTCACTCTGATGACAAACCATACAGATGTGAAGAATGTAACAGACAATTTGCACAAAAGGTTCATTTAGATGCACACAAAGAAAGTCATACCGGAGAAAAACCATACGAATGTTTGGAATGTAACAAGCGATTTTTAGTAAAAAGTAATTTGGTTAAACATAGAAGAATTCACACCAGTAAACCATACGAGTGTGAACAATGTGACAAGCAATTTGCACAACAAGGTCAGTTAGATATACATAAAAGGGTTCACACCGGAGAAAAGCCATACAGCTGTGACGAATGCGACAAGCGATTTGCGGTAAAAGGTGGTTTAAATGAGCATAAAAAAATTCACACCGGCATCAAACCATTCGCCTGTGAAGTGCGGCAGCTGCAGTTCAGGCTACAATGTAGCGGCAAAACTACTCTCCGATTGAGTGCCTACATTTCTGTCCCCTTTACACTTAAGAAGTCgtag
Protein Sequence
MHWCRCCLRCPADRDLTTPYTHLGTTEIYSDMLKECFDLDINLTVDDGWCAICSVCAGRLRDASDFKLQVQRSQAELRARLQGALRVKEEEPAVEPETEDGDGSSEESGSDEEPSVKPEMLDMDETDAVLSSEMAAGAVAGRVSDEEPRVEAGMAAAGEEPPVKPEMLDEDGTDEVLGSEMEDGDGTSDEDEPISRHKRRARTRKEPKELKSSQKTFTDSEISDNDDSWPHGYMPSSDAHIPGSLNDTFFNEFPPPVTSESIPSANSLLPDPANENSYNPSYMSNATDLFESLPDAFQSATLSHKSTYIFNTTDTGEPPLETIERSAKAKEHRSEADHDLEIENQCLDGRHEVALNCCEETNIAEKENVSLRKCSSGDDIEEENEINNKNVAEENILEDKRGIVHATKMVARFNEVTQKFGAPTYAMNIATSIKQCCNIALMQSCEMEATVDSASVQADLRTLSKLIEDNWKFDISSQAVDDLNVKKWNKITIVSLAADLKLFKDHLCGISKQSSDDLTTENSNIQAFNNLVESTYCRVFLFNRRRPGELQRLKLNDYNDHGKDINKYEEFDKVLSPTEKILVDKLKTIVIRGKRGRGVPVLFSNEIQDDIKKILSARDMHIGSDNSLLFVKAGGTAVCGYKIFEKYAKACGAKNYRALTSTRLRKHLATLTQLFTMTDTELEQLATFMGHTLNVHKNNYRLSSDVYHIAKIFKLLLLMEDGKACMYQGKALDEIDLNLDEEIKVIETKNHEVTEFELEVLLDGCAGRPVSALASSQLAMTCSVRLERLRDDEAPHAIHTSLATLHESRRASRMKETHDNTGTAEEAYTCDTCGEDFTGKSSLIAHVRRHLAQDESAATYSCGTCSEQFSCKNLFARHEHAHTGIGVIAAVLTDMSLEPACIREESGVKTEPRVECVEIAPGVCLKIEPVEECVKTKLEFGRVEFVKAESGMDCVNAEPEVECVKTELGLVCVKTEPGVECVNAEPRVQCVKTELGLMCVKTEPGVECVESEPEVDCVKTEPGVKCVKSEPEVDCVKTEPGVECVKTEPEVDSVKTGPGVECEAATWAGLYEEHQVKDELVLSPEELQHPRAGAVSVVLDSCAGSPVERQASRTKETYGTVGLRAEEAYTCDTCGKHFTGKTGLIVHVRMHLASAATYSCGTCLEQFSNKRLFARHTRAHTGQKTYSCDMCNKQFKLKAHLVKHFKIHTDMNQYSCGVCSKTFRRSSYLKQHALIHMPSGSKPYTCEECDKQFALKSYFNKHKKTHSDDKPYRCEECNRQFAQKVHLDAHKESHTGEKPYECLECNKRFLVKSNLVKHRRIHTSKPYECEQCDKQFAQQGQLDIHKRVHTGEKPYSCDECDKRFAVKGGLNEHKKIHTGIKPFACEVRQLQFRLQCSGKTTLRLSAYISVPFTLKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-