Basic Information

Insect: Epiblema foenella
Gene Symbol: -
Assembly: GCA_963556455.1
Location: OY747121.1:10576424-10578004[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.1e-05 0.00085 20.8 1.0 2 23 81 103 80 103 0.94

2 14 0.00071 0.056 15.1 2.8 2 23 111 133 110 133 0.95

3 14 0.0025 0.2 13.4 1.4 2 23 140 162 139 162 0.92

4 14 1.4e-07 1.1e-05 26.7 0.8 2 23 170 192 169 192 0.96

5 14 2e-05 0.0016 20.0 1.0 2 23 200 222 199 222 0.96

6 14 0.00014 0.011 17.3 0.8 1 23 229 252 229 252 0.97

7 14 0.024 1.9 10.3 3.4 3 23 260 281 259 281 0.95

8 14 0.00015 0.012 17.2 0.7 2 23 297 319 296 319 0.93

9 14 0.00026 0.021 16.5 0.2 3 23 328 349 327 349 0.96

10 14 3.1e-06 0.00025 22.5 5.3 3 23 356 377 354 377 0.96

11 14 0.018 1.4 10.7 5.2 3 23 386 407 384 407 0.94

12 14 8.3e-05 0.0066 18.0 3.8 1 23 413 435 413 435 0.98

13 14 0.23 19 7.2 3.0 1 23 441 464 441 464 0.95

14 14 0.021 1.7 10.5 0.9 2 21 489 508 488 509 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.1e-05	0.00085	20.8	1.0	2	23	81	103	80	103	0.94
2	14	0.00071	0.056	15.1	2.8	2	23	111	133	110	133	0.95
3	14	0.0025	0.2	13.4	1.4	2	23	140	162	139	162	0.92
4	14	1.4e-07	1.1e-05	26.7	0.8	2	23	170	192	169	192	0.96
5	14	2e-05	0.0016	20.0	1.0	2	23	200	222	199	222	0.96
6	14	0.00014	0.011	17.3	0.8	1	23	229	252	229	252	0.97
7	14	0.024	1.9	10.3	3.4	3	23	260	281	259	281	0.95
8	14	0.00015	0.012	17.2	0.7	2	23	297	319	296	319	0.93
9	14	0.00026	0.021	16.5	0.2	3	23	328	349	327	349	0.96
10	14	3.1e-06	0.00025	22.5	5.3	3	23	356	377	354	377	0.96
11	14	0.018	1.4	10.7	5.2	3	23	386	407	384	407	0.94
12	14	8.3e-05	0.0066	18.0	3.8	1	23	413	435	413	435	0.98
13	14	0.23	19	7.2	3.0	1	23	441	464	441	464	0.95
14	14	0.021	1.7	10.5	0.9	2	21	489	508	488	509	0.92

Sequence Information

Coding Sequence: ATGGATCAGGAGATAGAGCAGATCTTCATAAAACCCGACATAACTCACCTGAAGGTGGAGGTGAACTGCGAACAGGAGGCCAGCGGGGACCCCTACCAGCCACCGGAAGATGTCTTCAATGTCAAACTAGAACAAAACGTAAACTCACACACATACGAAGACTCCAATGACTATGAAAATTCAAAAACGAACGTCGAGATTGTCGGTAAAGTGTACGAGAACGGTAAAATAAACAGACTGCAATGTCCGCAGTGCGACAACACATTCAAAAACCGAGCCAATTTGAAGCAGCATCTCAAGTTCGTACATTCCTCTGAAGACGACATTGTCGAGTGTGACAAATGTTATAGGACTTTTAAATCCGTTGGTCATTTACGGTCTCACATCCATTCCGTTCATGCTGAGGAAAAAGAAGTCAGTTGTGAGCATTGCGGCAAAGTTTTCTTGAACAAAAAACGTCTGAATAACCACATATTCTACGCTCACCCGGAGCCAGAGGAAAGCGTCAGTTGTAGCGTATGTAATAAAGCTTTTAAGAGGAAATATAACTTGAAAATTCACATGAGACTTGTCCATCCATCGGAAGACAGGTCCGTACAGTGCCCGCACTGTGATAAAACATTTAAGGTTGATATGTTACTGCAGAGGCATATAAAGTGGAGCCATCCGCAAGACGGCATGATGTACCGATGCCCGGAATGCGGACGCACGTTACCTTCCATCGCCTGCTTCAGAAAACACATGCAGAATGTACATTCCGGCTCGCAAGATGCTATATGCAAAATCTGCTGTAAAGTTTTCAAAACAGTTAAAACTTTGAAGCGGCATGAGAAGAATATACATGGGGGGGAGAAAGTAGAACCTAAACCGAGCAAAGTAGGAGATATACCTTGTTCACAGTGCGATAAGAAATTTACTACTAACACAGCATTGTTTTGGCATTTTGAGCGGCAACACTCTGAAAATAAGCGGATCAACGCGTGTCACGTGTGTGGGAAAGAGCTGTCGGACCAAGGAAGCGTGAAGAGACACATCGAAATGGTTCATTCATTCGATCCATCTCACTGTCACATATGCTCAAAGACTTTTAAAAGCCAGATGAACTTGCAGAGGCATATTAGAGTGACGCATGCTCCGCCCGAAGCCGCTCAGAACTGCGATATTTGCCACAAAACTTTCAAATGCTCCATGCATTTACGGATACATATAAACGCAGTGCATTCAACAGAGGGGACTTTCTACTGCGACGTGTGCAACAAAGAGTTTTCCTCCAAGAAATACATGTTGAAACATAAGAAAACTCATGTGGATGTTAAAGTTTTTCCATGCGGTGTCTGTAATAAGTTCTTTAAATGTGTAAATGATGTTAAAAAGCATACAAAGCGTGTGCATTTGAAGGCAGTTGTGAAAGTGGAAAACGAGGAATCCGAGGCACAAAATGATTCTAAAAGTACGGAGACTCTGAATTGTTTGAAATGTGGTTGTGATTTTGAGAATCAGGCAGAATTACATTCTCATATTTTGAATTGTAGCGATATTCCGGCGGCGGCATTTGTGAAGGTGGAATTCCATGATATGTAA
Protein Sequence: MDQEIEQIFIKPDITHLKVEVNCEQEASGDPYQPPEDVFNVKLEQNVNSHTYEDSNDYENSKTNVEIVGKVYENGKINRLQCPQCDNTFKNRANLKQHLKFVHSSEDDIVECDKCYRTFKSVGHLRSHIHSVHAEEKEVSCEHCGKVFLNKKRLNNHIFYAHPEPEESVSCSVCNKAFKRKYNLKIHMRLVHPSEDRSVQCPHCDKTFKVDMLLQRHIKWSHPQDGMMYRCPECGRTLPSIACFRKHMQNVHSGSQDAICKICCKVFKTVKTLKRHEKNIHGGEKVEPKPSKVGDIPCSQCDKKFTTNTALFWHFERQHSENKRINACHVCGKELSDQGSVKRHIEMVHSFDPSHCHICSKTFKSQMNLQRHIRVTHAPPEAAQNCDICHKTFKCSMHLRIHINAVHSTEGTFYCDVCNKEFSSKKYMLKHKKTHVDVKVFPCGVCNKFFKCVNDVKKHTKRVHLKAVVKVENEESEAQNDSKSTETLNCLKCGCDFENQAELHSHILNCSDIPAAAFVKVEFHDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00148678;
90% Identity: iTF_01072803;
80% Identity: -