Efoe036308.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747119.1:7798349-7807843[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 9.9 7.8e+02 2.1 0.2 3 23 40 61 39 61 0.92 2 36 0.039 3.1 9.6 0.5 2 23 87 109 86 109 0.94 3 36 0.026 2.1 10.2 0.2 2 23 132 153 131 153 0.96 4 36 0.00077 0.061 15.0 0.1 1 23 157 180 157 180 0.98 5 36 1.4 1.1e+02 4.7 0.1 3 22 188 207 187 207 0.90 6 36 0.66 52 5.8 1.8 1 23 214 237 214 237 0.92 7 36 0.72 57 5.6 6.1 1 23 244 267 244 267 0.96 8 36 0.0005 0.04 15.6 2.4 3 23 274 295 273 295 0.95 9 36 1.7 1.3e+02 4.5 0.3 3 23 321 342 320 342 0.94 10 36 4.8e-05 0.0038 18.8 1.3 1 23 349 372 349 372 0.97 11 36 0.0032 0.26 13.0 1.1 2 23 377 399 376 399 0.95 12 36 0.9 71 5.3 1.7 2 23 431 453 430 453 0.95 13 36 9 7.2e+02 2.2 0.1 2 23 478 500 477 500 0.94 14 36 0.34 27 6.7 0.5 2 23 525 546 524 546 0.93 15 36 5.5e-05 0.0043 18.6 0.1 3 23 552 573 550 573 0.92 16 36 7.4 5.9e+02 2.5 0.7 3 20 580 597 579 599 0.89 17 36 0.0024 0.19 13.4 0.3 1 23 636 659 636 659 0.97 18 36 0.23 18 7.2 0.5 2 23 697 719 696 719 0.91 19 36 5.3 4.2e+02 2.9 0.6 2 23 744 766 743 766 0.88 20 36 3.8 3e+02 3.4 1.4 3 23 790 810 788 810 0.95 21 36 3.7e-05 0.0029 19.1 1.0 1 23 814 837 814 837 0.96 22 36 1.2 95 4.9 1.3 3 21 844 862 843 863 0.94 23 36 0.52 41 6.1 1.6 3 23 872 893 870 893 0.93 24 36 0.00074 0.059 15.0 0.9 1 23 900 923 900 923 0.95 25 36 0.092 7.3 8.5 1.7 1 23 928 950 928 950 0.96 26 36 2.8e-05 0.0022 19.5 0.4 1 20 956 975 956 978 0.94 27 36 0.0065 0.52 12.1 1.1 1 23 984 1007 984 1007 0.95 28 36 2.5 2e+02 3.9 0.7 2 23 1071 1093 1070 1093 0.90 29 36 1.4 1.1e+02 4.7 1.4 3 23 1164 1184 1163 1184 0.97 30 36 0.0014 0.11 14.2 2.6 1 21 1188 1208 1188 1209 0.95 31 36 1.1 86 5.1 0.3 2 20 1217 1235 1217 1237 0.91 32 36 4.4 3.5e+02 3.2 2.5 1 23 1244 1267 1244 1267 0.93 33 36 0.0026 0.21 13.3 1.3 1 23 1274 1297 1274 1297 0.95 34 36 1.2e-05 0.00092 20.7 0.6 2 23 1303 1324 1302 1324 0.94 35 36 1.5e-06 0.00012 23.6 0.4 1 20 1330 1349 1330 1352 0.94 36 36 0.00035 0.028 16.1 3.8 1 23 1358 1380 1358 1381 0.96
Sequence Information
- Coding Sequence
- ATGCATAAAAATGAATATACAATGGACACACAAATCGATGCCGTGAGGAGAAACGCCGAGGCGATTATTAAGTACACGAGCGCTTTTCCGTTCCGCGTGAACGACAAGTCTATACTTTGCGTGTACTGCGGGGATTTGTACGGCGACCCCGCCCAGTTCCGTCTCCACATGGACCATGAACACGCGAAATTTAATTACCACACTCCCTTTGTGAATCTACCCAAATCAGAATACGTTAAAGTGGACATTGCTAATCTTAAATGTAGAATTTGTACTGCAACGTTTTCTAATTTAGAACTAGTTTTTACGCACTTAAAAGAAAATCACTTCATAACTGTACACGAAAATTCTCCAATTGGCGTGATGCCCTTCCTTTTAGATTGCAATGAGTGGAGTTGTGCCGTTTGTCAAGCAGGTTTTCCTTccttgttgcatttaaacaggcATACAATAACTCATTTTAGGAGTTACGTATGCGAAATATGTGGGAAGTCGTACGTAGCCACTACTGGACTCCTCCAGCACGTTAGGAAGACTCATGAACATGAGTATAAGGCATACTGCAGGCGATGTGGTATGGTGTTCTCTTCCATGGGTGCGAAAGCACTTCACCAAAAAACCGAGAAAAAGTGCATGCCATATTGCTGCTCTGTCTGCCCCGATAGATTTCCTACATGGGAAATGAAACAGCACCACATGGTCGAACAGCATGGTATGGTGAAGGAGGCTTATCAGTGTTCAGATTGTAGCGTCACGTGTTCTAGTCGGAGGGCCTTCTATGACCATTATAAATTGTGCCATTCTGGAGAATCGGTCGCTTGCGTACATTGCGGTCTGAGATTCTCTACATCGTCTCGTCTTAAAAGGCATTTAGCGAAAAAGCATACCCTGAAAACCTTTCCCACCATAGAGGCAAGGAGACAGCATCTAAGGACGACTAAAGCATGCCAACCCACCTTGTGCCGCCTCTGCGGTGAAAGGTTTTTACACTGGGACCAAAAAGAAGATCACATGGTTGTGGTTCATATGAAAGAAAGGTCAATATTTCCTTGCACGGAATGCGACAGAGTATTCAAGCAACGGACTTTATTGTATAATCACTTCAAAACCGCCCACACCAACGAAAATAAATGCACATATTGCTATAAACAGTTTCCAACGAAACCTAAACTTAAAGAACACGTCGCCAGATATCACACTGAAGATGAACAATCCGCGGCGAGACAGAACGGCCAGGTAGTCGTCAAGTACACTACAGCGTATCCATTCAAGCTCCCAGAAAACGACATGGTTTGCGTGTACTGTTGTGAGACCTATGAGGACCCATGCCAATATAGAGAGCACATGAAAGTTGAACATAAAACTTTCAAAGTCAACATGGCGTTCCTACATTGCTACGAAGGCTACATAAAAGTGGACATTACCGAATTGAGTTGCCGTATTTGTGAAGAACGCTTACCTGATTTAAAAACAGCCGCGAATCACCTAACAACTACCCATCGCGACCCTAATATAAACTTAAACTTTGAAGTAGGTTTACAGCCATTTAAACTCATTGATAACCTCCATTGGACATGCGCTGTGTGTGAACAGAAAGCCTTTTCTCTACGTCAACTGAGCAGGCATACTCAAACGCACTTTTCCAAATTGGCTTGTGATATTTGCGATAAATCGTACCCCACGCCGTCTTCCCTTCGGCAGCACGTACAATTCGTACATTTCGGCCGTCAGCGCATATGCCGAAAATGCAGACAGACATTTGATACAGCGGAAGAGAAACATGATCATTTGACTCAATTTAAAATGTGTCGTCAGTACTGTTGTCTGGTCTGCGGCGATCGCTTTATACTGTTGAAAGAAAAACACGCCCACATGATGGAAAAACACGGTGCTCCAGAGCAATCATTCCCCTGTCCCCAATGCAGCGAGGTGTTCATGAGCAAAAACAAACTAGCTGACCATTTTAGAGTATCCCACGCTCAAGCTAAATACGTATACAATGATGCCTATCTCAACGCCAAACGGAACGCCGAGATTATCGTGAAATATTCGACTGCGTACCCATTCAGGCTTCCCGAGAGTTCCATGGTCTGTGTGTACTGCTGTGAGAGTTTCGATGACCCCACTCTGTACAGAAAACATATGGACGGTGATCATCAAACATTCAAAGTGCGCACTGCTTTTGTTCACTGCAGCGAAGGTTTTATTAAAGCTGACTGCACAGAACTACGTTGTCGACTCTGTGGTAAACACCTCGACAATTTAGAAGCAGCCGCTAGTCATTTACACTTAGAACACGACAAAAAATTAAGTCTTAACCGTGAATTAGGCATCCAGCCTTTTAAACTTGAAAAAGACAAACTTGCGTGTGCAATATGTAGCACCAAATTTCCTTGCATACGGCAACTCAGTCGGCACACTCAATCCCATTTTTTGAAATACACCTGTGATACTTGTGGAAAATCCTATGCTACAATAACCACTTTGAAGAACCATATTCGATTCTCTCACGCTGGAAACGAACGGATATGCAGAAAGTGTAGAATGACATTTTCTACTTTAGAAGCAAAACGAGAACACTTAAGGCATTCCGCTAAATGCTGGTCCCATTTGTGCATGTTTTGTGGAGAACGATTCATGACATGGACGCTAAAACAAAGCCATTTAAATCAAGTTCACGAGGCACCTAAGAAGTCCCACCCCTGCCCTGAATGTGGCGAAGTATTCTCCGAGAGAAAGAAATACCGCGTTCATTTCAAAATATCTCACACTGACGACAATTTTACATGCACTTGCTGCGGTTTAAAATTCGACACGAAACGCGGTCTAGAAGAACACAGAGTAGTGCACACAAAAGAGAAGTTATTCCCTTGCACTGTTTGCTCAAAATCGTTTCCCAGAAAAAAGAACTTGGCTCAACATATGTGGATACACAGCGAGTACAAAAGATTCGAGTGTGGTCCCTGTAACAAGCAGTTCAATCAAAGAGTCAGTTGGCGTACGCATATGAAATCCTATCATCCTGATCTAGTTGATTTTGAGGGAAAAGCCAACGTTTACGGAGATAGACTTAAAGTAAGACCGATGTCGTTACTAACCGATATTAAAGACAAAAAATCGATCTCCAATGCTACGATCGAGAGACGAAACGCCGAGATTATAGTGCAATATGCGACCGCTTTCCCCTTCCGGCTCCCAGAGAAGTTATTGGTGTGCGTGTATTGCTGCGAGAAGTTCGAAGATCCTTTAATGTTCAGAAAGCATATGGATGATGAACATCAACAGTTCAAAGTCCACATGGCGTTCGTTCATGTTTCCGATGGCGACCTGAAGGTCGACTGCACCGATCTACGGTGCAGGATATGTTCTGACCAGTTTAAAAAACTAGAAGATGTAGCCGAACATCTATTTAAAGTACACAATTACCCGTTAGACCTTAACTACTATTTGGGCCTACAACCATTCACCATATTCAAGGACTTGTGGCTTTGCGCAGTGTGCGGAGTTAAGTTCCCTTGCTTACGGACGTTAAGCAAACATACCCAAACACACTTTGTCAAATTCACATGCGAGACTTGCGGCAAATCCTATTCTACAACCACGTCTTTACACTCGCATCGCAAATTTTGTAACAAGTCTAACGGGCCGGTTTGCAGGAAATGTCTCAAAGTATTCCCAAGTTTAGAAGCCAGGAAAAAACATTACGAGAAAGAATCAAGATGCCGTCAACATACATGCAACGCTTGTTTAGAGAGATTCCATACTTGGAATTTAAAGCAACAGCACATGTTGGATGTGCACGGGAAACAAAAGAAAGAGCATCCTTGTCCAGAATGCAAGCTTACTTTTTCTTCCCGGCCGTCGTTCGCTCAACACTTCAAAATAAACCACACTGATACTTACATTCAATGTACTTACTGCGATAGGAAATTTGATACGGAATATAATTTAAAGCGGCATATAGTTGGACATACAGGTGAAAAATCATTCGAATGCCCTGTATGCTCCAAGACATTTCCAAGAAACAGTAACTTGAAACAACACATGTGGATACATAAGGCGGATAAAAGATTTGAGTGTAAATTATGCGTTAAACAATTCACTCAAAAAATTAGTTGGAAGACTCACATGAGGTCTCACCATCCTGAACTTGTTGACTTTATCCAGCTCGAAAAAAAAACCGGAATATTAGTCTATGAATAG
- Protein Sequence
- MHKNEYTMDTQIDAVRRNAEAIIKYTSAFPFRVNDKSILCVYCGDLYGDPAQFRLHMDHEHAKFNYHTPFVNLPKSEYVKVDIANLKCRICTATFSNLELVFTHLKENHFITVHENSPIGVMPFLLDCNEWSCAVCQAGFPSLLHLNRHTITHFRSYVCEICGKSYVATTGLLQHVRKTHEHEYKAYCRRCGMVFSSMGAKALHQKTEKKCMPYCCSVCPDRFPTWEMKQHHMVEQHGMVKEAYQCSDCSVTCSSRRAFYDHYKLCHSGESVACVHCGLRFSTSSRLKRHLAKKHTLKTFPTIEARRQHLRTTKACQPTLCRLCGERFLHWDQKEDHMVVVHMKERSIFPCTECDRVFKQRTLLYNHFKTAHTNENKCTYCYKQFPTKPKLKEHVARYHTEDEQSAARQNGQVVVKYTTAYPFKLPENDMVCVYCCETYEDPCQYREHMKVEHKTFKVNMAFLHCYEGYIKVDITELSCRICEERLPDLKTAANHLTTTHRDPNINLNFEVGLQPFKLIDNLHWTCAVCEQKAFSLRQLSRHTQTHFSKLACDICDKSYPTPSSLRQHVQFVHFGRQRICRKCRQTFDTAEEKHDHLTQFKMCRQYCCLVCGDRFILLKEKHAHMMEKHGAPEQSFPCPQCSEVFMSKNKLADHFRVSHAQAKYVYNDAYLNAKRNAEIIVKYSTAYPFRLPESSMVCVYCCESFDDPTLYRKHMDGDHQTFKVRTAFVHCSEGFIKADCTELRCRLCGKHLDNLEAAASHLHLEHDKKLSLNRELGIQPFKLEKDKLACAICSTKFPCIRQLSRHTQSHFLKYTCDTCGKSYATITTLKNHIRFSHAGNERICRKCRMTFSTLEAKREHLRHSAKCWSHLCMFCGERFMTWTLKQSHLNQVHEAPKKSHPCPECGEVFSERKKYRVHFKISHTDDNFTCTCCGLKFDTKRGLEEHRVVHTKEKLFPCTVCSKSFPRKKNLAQHMWIHSEYKRFECGPCNKQFNQRVSWRTHMKSYHPDLVDFEGKANVYGDRLKVRPMSLLTDIKDKKSISNATIERRNAEIIVQYATAFPFRLPEKLLVCVYCCEKFEDPLMFRKHMDDEHQQFKVHMAFVHVSDGDLKVDCTDLRCRICSDQFKKLEDVAEHLFKVHNYPLDLNYYLGLQPFTIFKDLWLCAVCGVKFPCLRTLSKHTQTHFVKFTCETCGKSYSTTTSLHSHRKFCNKSNGPVCRKCLKVFPSLEARKKHYEKESRCRQHTCNACLERFHTWNLKQQHMLDVHGKQKKEHPCPECKLTFSSRPSFAQHFKINHTDTYIQCTYCDRKFDTEYNLKRHIVGHTGEKSFECPVCSKTFPRNSNLKQHMWIHKADKRFECKLCVKQFTQKISWKTHMRSHHPELVDFIQLEKKTGILVYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -