Efoe036062.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747119.1:4057610-4075328[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.69 55 5.7 0.5 1 23 240 262 240 262 0.95 2 29 0.12 9.9 8.0 0.1 2 23 291 313 290 313 0.93 3 29 0.22 17 7.3 0.2 2 23 334 356 333 356 0.94 4 29 0.0016 0.13 14.0 2.1 2 23 362 384 361 384 0.95 5 29 0.0053 0.42 12.4 2.5 1 23 389 412 389 412 0.96 6 29 0.48 38 6.2 0.1 2 23 415 437 414 437 0.95 7 29 0.03 2.4 10.0 1.6 2 22 444 464 443 464 0.94 8 29 0.0075 0.6 11.9 0.3 1 23 525 548 525 548 0.95 9 29 0.94 75 5.3 0.0 3 23 577 598 575 598 0.92 10 29 0.092 7.3 8.4 0.6 3 23 622 644 620 644 0.95 11 29 0.0015 0.12 14.1 0.6 3 20 651 668 649 672 0.90 12 29 0.024 1.9 10.3 0.4 1 23 677 700 677 700 0.97 13 29 0.0023 0.18 13.5 0.4 2 23 706 728 706 728 0.94 14 29 0.00011 0.0084 17.7 4.9 1 23 732 755 732 755 0.97 15 29 0.00048 0.038 15.6 0.6 2 23 762 783 761 783 0.96 16 29 0.34 27 6.7 0.6 3 23 824 844 822 844 0.97 17 29 0.016 1.3 10.9 0.0 2 23 872 894 871 894 0.96 18 29 7.3e-05 0.0058 18.2 1.2 2 23 915 937 914 937 0.96 19 29 0.00063 0.05 15.3 1.5 2 23 943 965 942 965 0.92 20 29 0.0001 0.0081 17.7 3.5 1 23 970 993 970 993 0.97 21 29 0.16 13 7.7 4.8 1 23 1069 1092 1069 1092 0.96 22 29 0.013 1 11.1 0.2 2 23 1120 1142 1119 1142 0.95 23 29 0.11 9 8.2 0.1 3 23 1166 1187 1164 1187 0.95 24 29 0.32 26 6.7 0.1 3 23 1194 1215 1192 1215 0.93 25 29 0.24 19 7.1 0.3 1 23 1220 1243 1220 1243 0.96 26 29 0.037 2.9 9.7 0.1 2 23 1249 1271 1248 1271 0.93 27 29 0.00083 0.066 14.9 4.9 1 23 1275 1298 1275 1298 0.97 28 29 0.0042 0.34 12.7 1.5 2 23 1305 1326 1304 1326 0.97 29 29 0.007 0.56 12.0 3.7 1 20 1332 1351 1332 1354 0.95
Sequence Information
- Coding Sequence
- ATGGATTTCGACGAAATTGTAGTAAAAGAGAGCCCCGGCTTGTGCCGGTGCTGTCTGTCCGAAGGATGCTACAAAGACTTGGGTTCGGAATATAGTTGGATGAATGAGACTGAAATTTACGCCGATATGTTACTGGAATGCTTTGATATTAGTATATCCCAACATCCCACGGGGCCCAATGGCTCTAACCGCCTCATCTGCGAGGTGTGCATCACGCGGCTGCGGGACGCCTGCAACTTCAAGAAGCAGGTGCTGGAGTCGGAGAAGAAGTTTGTGGACATGGTCGGCCGGGGGGAGTTTAGGCCCAAAGTGCTGCTTTACCAGCCGCAGATGAAGATGGAGATGACTATGGACCTGGAGGAGGAGACCGGCGGAGATGACGGAGGCGAGGTGGAGTACCTCGAGGAAGACGTAGACTTTGTTGATGAGGACCTCAAAAATGAAGATTACGCCGAAGCGTCCGTCTCCGAAGACATCACTGTCTCGGCCTTGGCTGTTAAAGGCAAGCGAGGCCGCCCCAAGAAGACCGCGGCCAAGCCTGAGAAGAAGGCCAAAGTGGCCAAGGTGGAGGAGAAACCTAGCAAGTCGAAGGCAGTCGCTAAAGATGTAAAACCCCGGAAATACAAAGGCTGCGAATCGTCCTCGATGCGCAGACGAAAAAACCTCACAATACTGTTCAACAATACCTCAATCATACCCTTCAAATGGAGGGGGAAATATCTCTGCTTCTATTGCAGTAAAGATATAGCCGAATATCCTGCCCTCCGAAAACATACCAAGTCCCACGGCCACTGTTCCACCCGCGACCATTCCTTAAAAGTTCTCAAAGGAGGCCAAAATATGGAAATCAAAATCGACATCTCTGATATTACTTGCGAAATCTGCAGCGAACCTTTTCCTACCTTCGATGATATCATCACtcatttatttgttaaacacaaGTTAGAGTATGACAAAGGCGTCGAAATGGCTATAGAAGAGTATAAGCTAGTCGACCTTAGTTGTTTAGTTTGTAAAGAGAAATTCGCGTACTTCGGTTACCTAGTATCACACGTTAACAATAGCCATCCCAAAAACTGTCTCATCTGTGATAAGTGCGAACAAAAGTTTAATAAGAAACGAGATCTCTTTTCGCATATGAAGAATTATCATAGAGAAGGAGGTTATCAGTGCGAACACTGTCCTTTAAGCTTTAGCTCTCTAAACATACTAAGGAAACATAGGAACAACCGTCATTTGACTAGGTGTAGCATTTGTCAACTAAAACTACCTTCAGCTGCTCTAAAACAAAAGCATATGGAAGTTGAGCATCCTGATGACGGTTCTTTGCAATGTGATAATTGCTTCAAAGAGTTCCACACGAAGCAAGGTCTCCGAATGCATGTTAGAAAATGCAAAGGTGAAGGTGAGCTGTTTAATGTAGAAATAAGGAAAAAAGACTATGACCCTATGGACCTTGATCAAAATTACGAAGACCCTGTTAAAAGGCCGAGCGTAAAACAAATTAGGGAAAATATAGTCATAGTTATCAACATGTCAACAGCTATTCCGTTTAATttctataaaaacaaatttaattgCTTTTACTGTTCCAAAGACTTTCCCGATTCAGACTTAATGCGAGAACATACTATAATAGAACACCCTACTTGTGATGTGAAACAGAAATGCATTAGAAAATGTAGAGAGTCTGTAGCATGCGTCAAAATTGACATTTCTTCACTGGCGTGTAAACTATGCTTCGAGTCCCTGCCAGATTTAGATACTCTTATAGACCATCTAATCTTAAAACATGACGCGAACTACGACAAGTCTATAACGACCTGCTTACAACCGTACAGGCTCATCAAAGACCATATGGCCTGCCCTCATTGTCCAGGCGAAGTCTTCAGATTCTTCGGTACACTCTTAAAACACATGAACAACAAACATACTAATAATAACATCATTTGCGTGTATTGCGGTCAAACTTTTAGGCGCGATCAGAACTTACGTGTTCATATATGGCGTCACCATAGAGACGGTAGATTCAAATGTAATATTTGCGGTGCGGAATGTAATATACCTTCTAGGTTATACATGCATATGGCTAAAGCTCACGGAGTCAAAGCGGCTAAATGTCCTAAGTGCTCAGAGAGTTTTGCCACACAGTACTTAAGACAGAAACACCTGATAGAAGCCCACGATTCGGGCCACAAGTGCACGTATTGTGGGAAATTATTCACTAGGAATTCGTTCATGAGGGACCACATAAGGAGGACGCATCTGAAGGAGAAAAACGTAGAATGCTCCATCTGTAATATGAAGTTCTTCAATAATATTCTCCTCAGACGGCATATGGTGAAGCATAGCGATATAAAACACCGGTCAATCGGCGGGCTGAGCGCTACTGAACGTAGGAGAAAAAACCTGGTCATACTATTCAACAACACAACAATAGTACCGTTTAAAAGCGGCAGCCAATATGGCTGCTTTTACTGCGGGGACAAGTATCCCGACTATAAGGAGTTCGTTAAACACACAAAGTCTCATGGTCCTTGCAATGTTAAACATAAGTCTTTAGTCAGCCAAAAGTTTGGCACAGTAGAAGTCAAGTTAGACATTTCAAATATCACCTGTGAATTATGCGAAGAACCTTTCAGTAATTTAGATGATATCATATCCCATTTGATTACTAAACACAGTTTACATTATGATAGAGATGTCCCCATGACTCTGTCCGCTTACCGACTAGTAGATCTCAAGTGTACGGAATGCGGCAAAACTTTTGAATATTTCCGTAATCTAGTTATGCATGTGAGGAAAAATCATATGGAGAAGCTCTTGCCATGTGAACAATGTGATAGGAGCTTTAATAAGAAATCAGAATTGATGGCTCACTGCAGGATTTACCATAGACGCGCGGGTTACCAGTGTGTGAAGTGTGAACGATGCTTTCGCACCTCTAGCTTGCTGAGGCTACATCTTATGAATACTCACGGTTCCTCTGAACGCAAATGCACAAGAATCCTATCCAGTTTGAGAGCGAGGAGCTCCCACTATCTAAAAATTCCTGAAGACATCGAGGATTCGGAAGACTGTGTAATAGAAACGCAGCGTAAAAGACTACGTGAGCGGAATGCATTAGCTAAAAGGAATCGTGAGAATATCGCATGCATTCTGAATATGACGACCGCAATACCGTTCAAATACTATCAGAACAGATTCACGTGTTTTCATTGTTCTAAAGACTTCAACGAACACGAAGACATGCGAACACACACGCTAATGGAACACCCTTTCTATGATTTGGAGAGAAAATGTCCTAAAAGTCTTAAAGGCGTTAATTTGTGCATTAAACtggatatatcttcgttgtctTGCAGAATCTGTTTCGAGACGTTTACTGATTTTGATTTGCTGGTAGATCATTTGATCATGAATCATAAAGCTAAGTATGATAAGAATATCACAGGGATTATGCAGCTGTTTAGACTTGAGAAGTATAATATGGCGTGTCCTCTCTGTCCTCAAGCGTTTTCTTATTTTAATATCCTCCTTAAGCATATGAACCAGGAACACTATGCGAAAACGCATCTTTGTTCGAATTGCGGAGCCGTTTTCGCTAGCGAGGCGATATTAACAATGCATATTGCCCGAATACACGGCCCTAAAGTATTCAAATGTTCAGAATGTGACATAGAATTGGGTTCAGCATTGAAGTTAAAAAGCCACCGAGCCAAAACTCACGGAGTCAGAGAGGTACCCTGTCAAAAGTGCCCAGAGAAATTTCCCTCCGAGTACGAGCGACAAAAACATCTAATTCAAGCACATGATATAGGCCACAAGTGCACGTTTTGCGGAAAAATGTTTGTTAAAAACTCCTTCATGAGGAATCACGTTCGTCGAACGCATATGGAAGAGAAAAACGTACAATGTACAGTTTGCAATCATAAGTTTTTCGACAATATTCTGCTGAAGATACACATGGTTAAGCATATTGGGGAGAGGGACTTCCATTGCGACGTTTGTGGAAAGAGTTTTTACTGGAAGAAGAATTTAAGAGTACATATGGCGTGTCATAATAAGCAAGCTAAAATAGCGAGCTTATAG
- Protein Sequence
- MDFDEIVVKESPGLCRCCLSEGCYKDLGSEYSWMNETEIYADMLLECFDISISQHPTGPNGSNRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGEFRPKVLLYQPQMKMEMTMDLEEETGGDDGGEVEYLEEDVDFVDEDLKNEDYAEASVSEDITVSALAVKGKRGRPKKTAAKPEKKAKVAKVEEKPSKSKAVAKDVKPRKYKGCESSSMRRRKNLTILFNNTSIIPFKWRGKYLCFYCSKDIAEYPALRKHTKSHGHCSTRDHSLKVLKGGQNMEIKIDISDITCEICSEPFPTFDDIITHLFVKHKLEYDKGVEMAIEEYKLVDLSCLVCKEKFAYFGYLVSHVNNSHPKNCLICDKCEQKFNKKRDLFSHMKNYHREGGYQCEHCPLSFSSLNILRKHRNNRHLTRCSICQLKLPSAALKQKHMEVEHPDDGSLQCDNCFKEFHTKQGLRMHVRKCKGEGELFNVEIRKKDYDPMDLDQNYEDPVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTIIEHPTCDVKQKCIRKCRESVACVKIDISSLACKLCFESLPDLDTLIDHLILKHDANYDKSITTCLQPYRLIKDHMACPHCPGEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVKAAKCPKCSESFATQYLRQKHLIEAHDSGHKCTYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSDIKHRSIGGLSATERRRKNLVILFNNTTIVPFKSGSQYGCFYCGDKYPDYKEFVKHTKSHGPCNVKHKSLVSQKFGTVEVKLDISNITCELCEEPFSNLDDIISHLITKHSLHYDRDVPMTLSAYRLVDLKCTECGKTFEYFRNLVMHVRKNHMEKLLPCEQCDRSFNKKSELMAHCRIYHRRAGYQCVKCERCFRTSSLLRLHLMNTHGSSERKCTRILSSLRARSSHYLKIPEDIEDSEDCVIETQRKRLRERNALAKRNRENIACILNMTTAIPFKYYQNRFTCFHCSKDFNEHEDMRTHTLMEHPFYDLERKCPKSLKGVNLCIKLDISSLSCRICFETFTDFDLLVDHLIMNHKAKYDKNITGIMQLFRLEKYNMACPLCPQAFSYFNILLKHMNQEHYAKTHLCSNCGAVFASEAILTMHIARIHGPKVFKCSECDIELGSALKLKSHRAKTHGVREVPCQKCPEKFPSEYERQKHLIQAHDIGHKCTFCGKMFVKNSFMRNHVRRTHMEEKNVQCTVCNHKFFDNILLKIHMVKHIGERDFHCDVCGKSFYWKKNLRVHMACHNKQAKIASL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -