Efoe036036.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- Zfat
- Assembly
- GCA_963556455.1
- Location
- OY747119.1:3917063-3935823[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.00047 0.037 15.7 3.2 3 23 2 23 1 23 0.94 2 30 0.006 0.48 12.2 0.5 2 23 59 81 59 81 0.93 3 30 0.6 48 5.9 0.1 1 13 87 99 87 100 0.91 4 30 0.0031 0.25 13.1 1.3 1 23 119 142 119 142 0.94 5 30 0.00017 0.014 17.0 1.0 2 23 178 200 178 200 0.96 6 30 0.0062 0.49 12.1 4.0 1 23 228 251 228 251 0.92 7 30 0.00062 0.05 15.3 1.0 2 23 287 309 287 309 0.96 8 30 0.0012 0.092 14.4 1.1 1 23 315 337 315 337 0.96 9 30 7.7e-05 0.0061 18.1 0.8 1 23 343 365 343 365 0.98 10 30 0.0021 0.17 13.6 2.1 1 23 404 427 404 427 0.97 11 30 0.00017 0.013 17.1 0.2 2 23 463 485 463 485 0.96 12 30 0.0017 0.13 13.9 1.3 1 23 491 513 491 513 0.96 13 30 0.00086 0.069 14.8 1.4 1 23 546 569 546 569 0.90 14 30 0.00014 0.011 17.4 0.8 2 23 605 627 605 627 0.97 15 30 0.00021 0.016 16.8 2.2 1 23 633 655 633 655 0.96 16 30 0.00055 0.044 15.4 0.7 1 23 688 711 688 711 0.94 17 30 0.093 7.4 8.4 6.6 1 23 773 796 773 796 0.96 18 30 3.2e-05 0.0026 19.3 1.5 2 23 832 854 832 854 0.95 19 30 0.072 5.7 8.8 1.3 1 13 860 872 860 875 0.91 20 30 0.74 59 5.6 6.2 1 23 901 924 901 924 0.96 21 30 0.0098 0.78 11.5 1.6 3 23 961 982 960 982 0.95 22 30 2.5e-05 0.002 19.7 4.4 1 23 988 1010 988 1010 0.99 23 30 0.0025 0.2 13.4 1.7 1 23 1038 1061 1038 1061 0.95 24 30 0.34 27 6.6 3.1 2 23 1068 1090 1067 1090 0.95 25 30 9.5e-05 0.0076 17.8 0.4 1 23 1098 1121 1098 1121 0.95 26 30 8.5 6.7e+02 2.3 0.1 3 13 1126 1136 1125 1139 0.91 27 30 2.9 2.3e+02 3.7 0.2 2 23 1152 1174 1152 1174 0.92 28 30 3.9e-05 0.0031 19.1 2.6 2 23 1181 1202 1180 1202 0.97 29 30 0.051 4 9.3 6.9 1 23 1208 1230 1208 1230 0.98 30 30 0.022 1.8 10.4 0.3 1 23 1236 1258 1236 1259 0.94
Sequence Information
- Coding Sequence
- ATGTGCAACATTTGTGACAAGCAATTCAAGAGACGGGACTTATTCCGCCAGCACTACATGCATGTCCATTTAAAACTAAGGAAAAAGAAGTATGCTTGTGTCATATGCAAAGAGGAGCTGTTTCCTTGGTTGAGGGCCAGGCATATGGAAGAAGCTCACGGCTGGGAGGCTCCTACGTGTGGAGCGTGTGGAAAAAAGTTCCCCTTTCAGAACACATTAATAAGTCATCAGAAGGCTTTCCACTTGGGCGAGAAGAACTTTCAATGTGATCAGTGTGACATGGCGTTCGCAAATCGGGACCCCCGCATATACTTAAACTTCTGCACGATAGTCGATGAAGCTGGATCACCGACATACGCGTGCAAGATCTGCGACAGGACTTACAAGGGCAGGAACTTATTCAGACAGCATTACCTGTATGTGCATCTAAAGCAAAGACCGAAGACTTATGCTTGTGTTATATGCAAAGAGCAGATTTTTCCTTATCTAAGAGCCAAGCATATGCATGAGCGTCACGGATGGAAGGTGCCTACGTGCGGAGCGTGCGGGAAAACGTTCTCATACGAAAACCTGCTGAGAAACCATCAAAAGACTTTTCATATGGGCGAGAAAAATTTTCAATGGAGTGGCTGCGATTACACAAAGTTCTACACTGTTATCGAAGAAGACGGATCCCAGATCTTTTCGTGTGACATTTGCGAAAAGACATACAAGAAACGGTCTTTATTCCGACAGCACTTCCTGCATGTCCATCTTAAGCTAAGACAGAAGACGTTCCGCTGTTATATATGTAATGAGCAAATATCTCCCGGTCTAAGAGCCCAGCATATGGAAGAAGCTCATGGCTGGAAGGCACCTACGTGTGGAGCCTGTGGGAAAAAGTTCCCCTACCGAAACACTTTGCTAAAGCATCAAAAGACTTATCATATGGGCGAAAAGAACTTTAAGTGTGACCAGTGCGACATGGTTTTCGCGGACCGATGGCGTCTGACACGCCATTCATACAAGCATGCGGAAGTTAGGAACTTTAAGTGCGGGTTTTGCTTGAAGGCGTTCAAGAGTCCAAAGAGTTTAAATATTCACCTGAAAATACACTTGGACGACAGGAGATATGTTTGCAAAGTTTGCGAAGATGCGTTTGTGCAGAgGACAGCCGGAAACGATTGCTATGAGTTCTGCACCGTCAACGAAGAACCCGGGTCCACGACCTACACGTGCTTGGTTTGCAATAGAACTTTCAAGGAAAAGAGGTTATTCAGAGAACATTATCTGAGAGTGCATCTAAAGCTAAGGAAGAAGTCGTACCCTTGTGTCATTTGCCAAGTGCAGCTGATTCCATCGAAAAGGGCCCTGCATATGGAGGAAGCTCACGGATGGGAATCACCCACGTGCGAAGCGTGCGGAAAAAAGTTTCCCTACCCAAATGCGTTGCTAAGACATCAAAGGGTCTTCCATATGGGAGAGAAGGATTTTAAATGCGACCAGTGTGACATGGCTTTCGCCAACAAACAACGTCTGATACGACATTCATATAAGCATACCACTATTCGGAAGTTTAAATGCGAGATCTGTTCGAGAAAGGCTCCGGCCTGGGTACCGTTCTGCACCATCAAAAAAGAAGACGGATCGGAGACATACACGTGCAAGGTTTGCGACAAGACTTTCAGCGCACGGAACTTATTCAGACAACACTACGTGCAAGTGCATCTAAAGCAAAGACCAAAGACTTTTCGTTGTGTAATTTGCCATGAGCAGCTGGTTCCATCGAAAAGAGCCCTGCATATGGAGAAAGCTCACGGCTGGGAAGCGCCTACTTGCGAGGCATGTGGAAAAAAGTTCCCCTTCCAAAATGCGTTGCTAAGACATCAAAGGACCTTCCATATGGGAGAAAAGAATTATAAATGCGACCAGTGTGACATGGCTTTCGCCACCAACCAGCACCTGATACGGCATTCTTATAAGCATACCGAAGAACGGAAGTTTAAATGCGTGATCTGCTCGAGAGGGCCCAGCGGATACTTAAAGTTTTGCACTATAGTCGAAGAAGCCGGAATACTGGCCTACGTGTGCAAACTCTGCGATCGAGCTTACAAGAGCAAGGCGTTATTCAAACAACACTACGCCAATGTGCATCTAAAATTACGGTTAAAGACGCATCCTTGTGCCTTATGCAATGAGCAACTGATTCCCTGGCAAAGGGCGAAGCACATGGAAGAAAACCACGGCTGGAAAGCACCAACTTGCGGGAAACCAAAGTCCAAAAGCCAATTGCTAAAGTACGCTACAATAACAGAAGAGGACGATGGCATCGCAACCTTTGCGTGCAAAGAATGCGACAGCTCGTTCAAGAGCCTTCGTTGTTTTAGACAACACTATAGACATATACACCTCAAACTTAGGAAAAAAACGTTTCCCTGCGTACTTTGCAAGGCGGAAATTTTGCCCTGGCTTAGAGCGAAACACATGGAAGACGCTCACGGTAGGGAAGCACCAACGTGTGGTGTTTGCGGAAAGAAATTCGCTTATCCACACCAGCTGACGAAACATCAGCAGTATTACcatatgggtgaatcaactttcaAATGTGATCAGTGCGACAAGACATTCCCGAACAGGAAAGGGAGGTTACGGAAGGAAACTAAGGATGAAAATGACAAGTTAATATGTACCGTCACAACAGAGGAAGATGGCACGAAAACCTTCACGTGTCTAACGTGTAGCAACACGTTCAAGCAACGCCAGTACTTCAGGCTACACTACAAGCACGTTCATCTCAAGCAACGTCCGAAAACGAGGCCGTGCACTATCTGTGGCGCCCAACTTACCCCCCACAAGCACGCAAGACATTTAGAACAGGTCCATGGAAAACCAGCGCCTTCCTGCGGGGCTTGCGGCAAGAAATTCTCCTTCCCCTTCGAAGTAATACGGCACCACAAGACCTTTCACATGGGAGAGAAGCATTTCCAATGCGAGAAATGCTCAATGACGTTCTCCCATAAAAAGAACTTGAATCTCCACATAATGAAGCATCAGGACGTGAAGAAGTTTAAGTGTAAAGCACACATAGACGAGTTCGTGACAGAAGTCCCAGACTTGTCGAATGACAAGCAGCACATGTGCAAAGCCTGTAAAGTCTCATACAGACGTCTGTCAGATCTGCGGAACCATATATCACGCGCGCACTTGAAACAGAAATTCATTAAATGCACGCTATGCTCTGAGACCTTCATGTATCATACACAACGGAAAAACCACATGTATTCTGTGCATTCCATTGATAAACCTGAGAAATTTGTTTGTGGATACTGTAGCAGGGAATTCCGAAGGAAGAATACTTTAGCAGAACATATGATGGATGTTCACATTGAGAAAATCTGCTCGCATTGTGAACTGAAGTTCCCTAGaaaaaagattttatttcaCTTGAACGAGGCTCACGGTGTCCCCATGCCGACATGTGGAATATGTGGTTTAAGGTCTTTGAAAGAAAGCGTTCTAGTGAGACATCAGCGGAACGTCCATTTGAATGAAAAGAATGTGGTGTGTACAATTTGTAAACGGCGGTTTTTCACACGTTCCAACCTACACGACCACATGATCACGCATAATCAGGAGAGGGTGTTCAAGTGCGATGTATGTTCGAAGACATTTGCGAGAAAAGAGTGTCATAGGACGCATTACAGGATTCACACGGGGGAGAAACCCTATAATTGCGAAGTATGCGGCGCGGCGTTTGTGCAGCGCGCTGGGCTTCGGTTCCATGCCAAAAGCCATCATCGAAACaagtga
- Protein Sequence
- MCNICDKQFKRRDLFRQHYMHVHLKLRKKKYACVICKEELFPWLRARHMEEAHGWEAPTCGACGKKFPFQNTLISHQKAFHLGEKNFQCDQCDMAFANRDPRIYLNFCTIVDEAGSPTYACKICDRTYKGRNLFRQHYLYVHLKQRPKTYACVICKEQIFPYLRAKHMHERHGWKVPTCGACGKTFSYENLLRNHQKTFHMGEKNFQWSGCDYTKFYTVIEEDGSQIFSCDICEKTYKKRSLFRQHFLHVHLKLRQKTFRCYICNEQISPGLRAQHMEEAHGWKAPTCGACGKKFPYRNTLLKHQKTYHMGEKNFKCDQCDMVFADRWRLTRHSYKHAEVRNFKCGFCLKAFKSPKSLNIHLKIHLDDRRYVCKVCEDAFVQRTAGNDCYEFCTVNEEPGSTTYTCLVCNRTFKEKRLFREHYLRVHLKLRKKSYPCVICQVQLIPSKRALHMEEAHGWESPTCEACGKKFPYPNALLRHQRVFHMGEKDFKCDQCDMAFANKQRLIRHSYKHTTIRKFKCEICSRKAPAWVPFCTIKKEDGSETYTCKVCDKTFSARNLFRQHYVQVHLKQRPKTFRCVICHEQLVPSKRALHMEKAHGWEAPTCEACGKKFPFQNALLRHQRTFHMGEKNYKCDQCDMAFATNQHLIRHSYKHTEERKFKCVICSRGPSGYLKFCTIVEEAGILAYVCKLCDRAYKSKALFKQHYANVHLKLRLKTHPCALCNEQLIPWQRAKHMEENHGWKAPTCGKPKSKSQLLKYATITEEDDGIATFACKECDSSFKSLRCFRQHYRHIHLKLRKKTFPCVLCKAEILPWLRAKHMEDAHGREAPTCGVCGKKFAYPHQLTKHQQYYHMGESTFKCDQCDKTFPNRKGRLRKETKDENDKLICTVTTEEDGTKTFTCLTCSNTFKQRQYFRLHYKHVHLKQRPKTRPCTICGAQLTPHKHARHLEQVHGKPAPSCGACGKKFSFPFEVIRHHKTFHMGEKHFQCEKCSMTFSHKKNLNLHIMKHQDVKKFKCKAHIDEFVTEVPDLSNDKQHMCKACKVSYRRLSDLRNHISRAHLKQKFIKCTLCSETFMYHTQRKNHMYSVHSIDKPEKFVCGYCSREFRRKNTLAEHMMDVHIEKICSHCELKFPRKKILFHLNEAHGVPMPTCGICGLRSLKESVLVRHQRNVHLNEKNVVCTICKRRFFTRSNLHDHMITHNQERVFKCDVCSKTFARKECHRTHYRIHTGEKPYNCEVCGAAFVQRAGLRFHAKSHHRNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -