Efoe016551.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- clz9
- Assembly
- GCA_963556455.1
- Location
- OY747101.1:20988450-20991374[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-06 0.0012 19.7 0.0 2 36 15 50 14 55 0.89 2 2 1.6 9.5e+02 0.8 0.1 24 40 878 894 878 896 0.89
Sequence Information
- Coding Sequence
- ATGCCGCGGAcgtatataaaaaagaaaatccagAAATATTCCAAAGAAGACCTGGAAAAGGCTATAAATGAAGTTAGGAATAAAGAGTCCACCATCTATGCCGCTGGGTTAAAGTACGGCATACCTAACACCACACTATTTGACCAGGTGAAACTATTACATCCCTTAAATAGAGGCAGACCAATAGCGATCCCGTTAGAACAGGAAGAACAATTAGCGAGCGGCCTTCGGACTATGGAAAAATGGGGTTTTGgactcgcaagaggtgagattTTGCAACTAGTGTGTGACTATGTCAAGAAGAATAATATTGAAACCCCATTTAAAGATGATATGCCTGGCCCAGATTGGTTCATCAATTTTAAGAAAAGACATAGTCTTTCAGTCAAAAAACCTCAGCCAGTTGAGTACGTACGCAAGAAAATGACAGACCCGTTCGTTATATATGGATATTTTGAGCTGCTGGGAAATACTTTGGCTGAACAAAACTTGCTTGAACGGCCAGATTTAATATGGAACATGGATGAGACATCATTGTGTCTAGACCCAACACGAACAAAAGTAGTAGGTGCAAAAAACCAGCCTTGTTCAAGAACGACCTTTGGTAGTGGCAAAGAAAATATAACTGTGTTAGCGGCTGCTAGTGCTTCTGGACAAAAAATATCACCCTTAATAATATATAAGGGTAAAAACGTTTGGGACCAGTGGATGGCTTCCACGGACAATCATGACTTTGAGCTTGCTTACGCTGCTAGTACCAAAGGCTGGATGGAAGCGCCGATATTTCTAAACTATTTGGAAAGAGTATTTATTCCAGCATTGGGCGAAGAACGGCCTGTCCTGATAATATTTGACGGCCATTCAACACACGTAACTCTTGGAGTCGTGTACTTGGCCATCCGACATGggatcacaattttaaagatgCCCCCACATACATCTCACTTGTTGCAACCTTTAGATGTGGCAGTATTTAAATCTTTTAAATGCAAGTGGGATGCTAAACTGGTTACCTGGCAACGCCATAACGTCGGAATAAAGATGCCAAAGAAAATATTTGCACAAACTTTCGCTGACACTTGGCAAGAAACAAACACCGAAGTAATACGAAGTGGATTCAAAAAAACTGGGATTCATCCCTTTGACCCAAAAGTAATCACGGAAGATAAATTCGATCCAGCTGCCTTGCAACGGTATAAGGATCAAAAGTccaaaaaatctttaaaacagcCAAAGTCCCTAAAAACGATTTGCGTGGATGCTTTAAACATGCTTAGCTGTAGCACTACCTGTACTTTGGACAAGGAAGAACAAAGCGCTCCGAATCAATCAGATGTTTTTTCTGGCCCTGTTTCTAATTCCAAAGACCAAAGTGTTCCCAACCTTGATAAGGAAACACCAACTGCTACACAGCAGCCAAACACTATTCCGATCTCTGCCTTGGATGCTACTCAGAAGCGTACTTCAGTATCGAGTATTGAAAAGGAAGCACAATATACTACTACGCAAGACAATGTTTCATGCCAGCCAACTGTTTCTTGTCTTGATTCGGACGTAAACCCAACTCCAACCCAAAAAAGTACTTATTTTGGCACCAATAATGTCACATTGTTAACCAGAATTTGCAGAAACgatattcaaaacaaaaaatttGTGGCAAGTAAAACATCAGATTTACCTAAATGTCTTGATGTGCCAAGACAAAAACATGAACCAAACTTACCCGAGCCTAAAGTAAAGATTATATCCAATATAAAGGTTAAATTTGAAGATTTATTGCTCGAAAAAATCACACAGGATAAAAAAGATAGTGGTCatacaacaacaaaaaaacgaGTAGCTAAAGGAGCAGAAGTCATAACGGCAGCTAAAGTAATAGAAGAGagagaaaaacaaataaaagaaaacgcTACCAAATCATCTAAAGATAAGGTCAATAAAGGGAAAAAATCTAATTCGAAGGATAATACAAAATCAAGCTATGCACCAagaataaacaaaaaaagagaaaaagacACAACTGCAGCTAAAGTTGTTAAAGTAAAAGAAACACCAATCAAAGAAAAAGTCACCAAAAAACCTGAAAACAAAAGAGTTACTAAAAGAAAAAGATATGATTCAATGGATATTCCAAACTGTACTGATATACCAAGTACATCAGgcatcaaaaaaaataagaagAAGAAACTAGATTCAAGTGCGTCTTCGACGGATGTCTCTGAATCAATGAGTATTTATAGCGACTGTGATATCGACGAATATTATGAAACACTCAGGGATGAAAACTTGGTTGAAATTTTTGATGCGGAAATCAAAGAATATGATGAAAATTCTGATTTACAAATAATATCGCAGAATACGAATAACGTAACTTCATTAAATATCATAGACACTAAAACTAAGAATAAAGGAGTgggtaaaaaaacaaaactgaAAGAGAATAATAAGGCAAATAGTGATAGTGATACTATCCGTATCTCAAATGAGGGCATTCTTATCGAGAATAATCAAATTGTTGATCAACCAAAAAAGATGGATTTGCTTCTAGATAGCGCAGAGGACGCTTGTGAAacaaataagattaaaaaaagcGATCAAAAGCTCAATGACGAAAACTGTGACactgtgaaaaaaatatataatatgaatGATTCAGTTCTAGTTAGATACTATAACAGAAAAAAGTGGACCTATTACATtgggtttattaaaaaaacaatagaaaaggAAGGTGAAACACACTATTGTATTGATTTcctgaaaacattgaaaaaaccGCAACTTAGATTTATTGAAACTAAAAAAGTGGATCACGACGTACTTCCAGAATTACGCATTGTTAAATCCATATTCGTCAAAAGAAACCTAAGCAATCTTAAAGAGTATTACTTGATCAACGACTgtgataaagtttattttgaataa
- Protein Sequence
- MPRTYIKKKIQKYSKEDLEKAINEVRNKESTIYAAGLKYGIPNTTLFDQVKLLHPLNRGRPIAIPLEQEEQLASGLRTMEKWGFGLARGEILQLVCDYVKKNNIETPFKDDMPGPDWFINFKKRHSLSVKKPQPVEYVRKKMTDPFVIYGYFELLGNTLAEQNLLERPDLIWNMDETSLCLDPTRTKVVGAKNQPCSRTTFGSGKENITVLAAASASGQKISPLIIYKGKNVWDQWMASTDNHDFELAYAASTKGWMEAPIFLNYLERVFIPALGEERPVLIIFDGHSTHVTLGVVYLAIRHGITILKMPPHTSHLLQPLDVAVFKSFKCKWDAKLVTWQRHNVGIKMPKKIFAQTFADTWQETNTEVIRSGFKKTGIHPFDPKVITEDKFDPAALQRYKDQKSKKSLKQPKSLKTICVDALNMLSCSTTCTLDKEEQSAPNQSDVFSGPVSNSKDQSVPNLDKETPTATQQPNTIPISALDATQKRTSVSSIEKEAQYTTTQDNVSCQPTVSCLDSDVNPTPTQKSTYFGTNNVTLLTRICRNDIQNKKFVASKTSDLPKCLDVPRQKHEPNLPEPKVKIISNIKVKFEDLLLEKITQDKKDSGHTTTKKRVAKGAEVITAAKVIEEREKQIKENATKSSKDKVNKGKKSNSKDNTKSSYAPRINKKREKDTTAAKVVKVKETPIKEKVTKKPENKRVTKRKRYDSMDIPNCTDIPSTSGIKKNKKKKLDSSASSTDVSESMSIYSDCDIDEYYETLRDENLVEIFDAEIKEYDENSDLQIISQNTNNVTSLNIIDTKTKNKGVGKKTKLKENNKANSDSDTIRISNEGILIENNQIVDQPKKMDLLLDSAEDACETNKIKKSDQKLNDENCDTVKKIYNMNDSVLVRYYNRKKWTYYIGFIKKTIEKEGETHYCIDFLKTLKKPQLRFIETKKVDHDVLPELRIVKSIFVKRNLSNLKEYYLINDCDKVYFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00654222; iTF_00654221;
- 90% Identity
- iTF_00654221;
- 80% Identity
- -