Efoe038627.2
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747122.1:9813091-9828051[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-05 0.014 16.3 0.0 7 35 46 73 42 78 0.88 2 2 0.089 54 4.8 0.0 7 34 279 305 276 314 0.84
Sequence Information
- Coding Sequence
- ATGGACCACGGGATACCGCTCAACATCCACGCGCGACCCAGGATAGTTGGACGGAGACCTAATGCCATCGTGAATATTGAAACAGACGTGTTCCAGGAGAAGAGTTACAAGCAGTATTCATCCCAGCATCTCCGAGACGCGCTTATAGCTGTGAAGAAAGGATACAGTGTTTACGCGGCATCTAATAAGTATGGGGTGCCGAGGAAAACTTTGAGGAATTGGATGGAGAAGTATGATATTAAAAGCCAGTTTTCTAAAGGCAGGCGCGGGGCGAGATCCACGCAGATTCTGGATCCGTTGGATTTGATGACAGAAACACGCTCGGAGAGGTTCGACGAAGCACTCCAGTGGCAATGGCGCCTCGAGCAAGCGCGCGACAAGCAAACCTCTCCTGGACCGCTGGCAGGCCTCAATTTCCCGATTGCGAACGTCCAGTGCCAATACGACTCTCCTGATGAGCGGCCCGATCAAACCGACCACACGTACGACACGCGCGACGAGCCACCCGCCTTCATCATACACCAGGCTGACGAGCGGACGGACCACACGTACGACACGCGGGACGAGCCACCCGCCTTCATCATACACCAGGCTGACGAGCGGACGGACCACACGTACGACGCGCGGGACCAGCCTCCCGCCTTCATCATACACCAGCAGCCAGTTCAGCTGCAGTCTGCGCCGGCGCCGTTCGTCGAGGTGTCGACGGCGAAGCTCGGCTATCCAGCAGTCAACGTCATACATGTCGGGGAAAATAATAGGCAACAGCAAACGCAACAGACAGAGTACATTAACATCAACAAGCGGATCAGACGGAGTGAAGTTGTGCTCCGTCAGGCAGCCGACTGCGTCAGTCGTGGCCTAACCTTCCAGACTGTATCCCATCAGTTCAACATACCCATCTCTACTATACGTTTCTTCATGGCGAGAAAAGGCATCCTACCTCAAAGGAGACGCGGTCGTAGCACAGTTGTCCCTCGTCCGTGCTCGAGCCCCGAGCCGCCTTACCACATGCAGCACTACAAGCTCCCAGACATGGTCGCATTGCGGGATAGCGAGAACTCCAACGAGTAA
- Protein Sequence
- MDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARSTQILDPLDLMTETRSERFDEALQWQWRLEQARDKQTSPGPLAGLNFPIANVQCQYDSPDERPDQTDHTYDTRDEPPAFIIHQADERTDHTYDTRDEPPAFIIHQADERTDHTYDARDQPPAFIIHQQPVQLQSAPAPFVEVSTAKLGYPAVNVIHVGENNRQQQTQQTEYININKRIRRSEVVLRQAADCVSRGLTFQTVSHQFNIPISTIRFFMARKGILPQRRRGRSTVVPRPCSSPEPPYHMQHYKLPDMVALRDSENSNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -