Efoe005679.2
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747097.1:4938304-4958668[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-07 0.00018 22.3 0.0 3 41 139 177 138 181 0.89 2 2 9.9 6e+03 -1.7 0.1 31 45 879 894 878 894 0.88
Sequence Information
- Coding Sequence
- ATGACAGATGATAATGACATCCAAATTGATTTATCTCAATATACCCAATACGCACAAGAGTTTGAGCTACCACAGGAATTTGACGACAGCGGCCTATACAAGAAAATCAAGGAAAAGATCGAGAAAACAAAGGTGAAAAAACGTAAGGTCAACATCAACAACAAGATAACAAAGCGAAACCTTGGACACCCACCATCTTTTGTAATTAATAACGATGCAGGGAAAGGAAGTAAGTTGGTCAAGATACAGATCATCAACATCCGAGATGGAGTGCCGAACGAAACCGACGACGAAAACGTCCTACTGAGTGCGCAGTATGTGGCAGCAGATGGATATGACGAAATCATTGACTGCACAGAAGGCGtaATGCCAAAAGTACGAGTCAGAACTACCACAAAAGCTTCCTGGTCTTTTGACACATTGGAAAAAGCAGTGAAACTTATAGAAGAAGATGGATTTTCTATACGCAAAGCTGCTATGGTTTCAAATATTCCATTTTCGAGTCTACAAAaaagatataataaaaaaaacaacttaacaCCACGTCTTGGGCGACTCACTGTGTTCAGCGCTGATCAAGAAAAACAATTGGCTGACTTGATCAAGAAGATGGCGaatattttttatggatgcACAGGTATAGAAATAAGAAAAGTGGCGTTTGAATATGCTGAAAACTTGAACCTAAAACACAACTTTAATCAGTCTTCGAAAATGGCTGGTCGTGACTGGTTAGTATCTTTTATGGCCAGAAATGATATATCAGTCAGAAAACCAGAAGCCACCAGCATAAATCGGATCACTGCATTCAATAAAACAGAAGTGCAGCTATTTTATCAGCTGCTGGGCGAACTGATGGCAAAACATAAATTTGTGAAAGGAAAAAAAGCCGTCTGCTCAGCTAAAGATAAGAAAAAAGGAAAAGATATAACTAAAGGTAAGGGCCAAGGAAAAAATACTATACTGCCGAAGAAGGAGACCGAAAGAGTAAAGAGGAAGATTCTCCAGGAATCAAACGATACCACTGTATCAGACATAGGAACTGATGATTTATGCCAAGATGATGAGCTAGATGATGCTGACGACACAGGAAATAGTCCCGTAAACTATATAGATGAGCATAAAGTTGTTATTGACAATCTGTATAAGGATGTGATAGAAGCCCTTAGATGTTCGGCTACCATTGGCAATTCTACGCCGGCAAATAGGAAAACCAAGAGTTTCAAAGGTTGGAACAAGTACGTCAGCGAGGCTCAAGGGGAGGCTAGGCGATTGTTTCAAGCCTGGGTATGGTACAATCGACCTAAATCAGGCCCAGTGTGTGATGCTATGATTGAAAGTAGAAGGCTATTTAAATCGCGCCTAAAATGGTGTCAAAAGCACGAGGAGCAAATAAAATTCGACAAAATGGCATCATTACATTCTAAAAAAGATTTTAGGCAGTTTTGGAAGTGTACAAATAGGATGAGTACTAAACCTGGCCTTCCCGCGAGCGTCGATGGTGTCAGTGATCCTAAACAAATAGCTGACTTATTTAGACATTTTTTTCTGGTGGAATCACCATTGGGCCCTTCATGTTCGGAACACGAGACTGAGACCATAATTGAGCCCGTCATAGTGGGGGCAAAAATTGCAGCTAAAGACGTAGCTATAGTTATAAGAAATATGTCTAGGGGCAAATCCCCAGGTCATGATGGTCTCAGCATCGAGCACTTACAACATGCGGGCCCACATTTACCTAGAGTTCTTGCCTTGTTGTTTACGCTATGTTTGAGACATTCTTATTTACCGACCGAGCTTATGAAAACCATTGTTGTACCGATTGTAAAAAACAAGACTGGAAACACATCGGACAAAACGAATTATAGACCAATCTCACTTGCTACCATTGTCACAAAAGTACTTGACGGTCTGCTTAATACACAGTTAGATAAGTACATACACCTGCACGACAACCAGTTCGGTTTTAGGCCTGGACTATCAACGGAAAGTGCGATACTGTGTTTAAAGCAGACTGTCAAATACTACACAGATCGAGACACACCGGTGTGCGCATGCTTTCTGGACCTGTCGAAGGCTTTTGACTTGGTCAGATATGACATACTTTGGAAAAAGTTGGTGGGTATGAAGGTCCCCCAGGAGTTcatatccatttttaaattCTGGTACAGAGGACAGATCAATAGTGTTCGATGGGCGGGGGCTCTGTCGGAACCATATAGGTTGGAGTGTGGGGTGAGGCAAGGGGGGTTAACATCACCGAAGCTCTTCAACTTATATATTAATGCACTAATTGCCGAGCTCAGCAGTACGCATATCGGCTGTCACGTGGAAGGCGTTTGCGTTAACAATATTAGTTACGCCGATGATATGGTGCTGCTGAGCGCGTCTCCGTGTGGTCTCGCTAAACTCATAGCGGTCTTATTGAAATTAAATGCGAAACCCCTGAAACTGGTCACTCAATTTAAGTACTTGGGGCATATCGTCACCTCTGACCTTAAGGACGGGGCAGACTTTGAAAGGGAGCGCAGGGCCCTGGCTGTTAGAGCAAACATGATTGCCCGCAGGTTTGCTCGAAGCTCATCTCCTGTTAAGGTAACTCTATTCAGAGCATTTTGTAGTTCATTCTATACGAGTAGTCTGTGGGTGAACTACACGCAAAAACAGTACAGCGCCTTAAGAGTGCAGTACAACAATGCATTTACGGTGCTGATGGGGCTGCCTCGCTACTGCAGCGCGTCAACAatgttcgcggaggcgcgcGTCGCAGCTTCTCTGCCGTCATGCGCAAGCGAGCCGCCTCGCTACTTAGCAGGAGATCTACGTCACCGCAAGGAGCGCAGGGGGAGAGCCGCGCCGCAGCCAGACGCCGCGCCGCCCCACCGCCGCAGCGTATATAAACCGCCGCGCGCCCGCATAAAGTTAGAGTTCGGCCAGCGCTCGCATGCGCCTCCGGCTCTGCCCCCCTCCTACCCTTCCGCATCCTGA
- Protein Sequence
- MTDDNDIQIDLSQYTQYAQEFELPQEFDDSGLYKKIKEKIEKTKVKKRKVNINNKITKRNLGHPPSFVINNDAGKGSKLVKIQIINIRDGVPNETDDENVLLSAQYVAADGYDEIIDCTEGVMPKVRVRTTTKASWSFDTLEKAVKLIEEDGFSIRKAAMVSNIPFSSLQKRYNKKNNLTPRLGRLTVFSADQEKQLADLIKKMANIFYGCTGIEIRKVAFEYAENLNLKHNFNQSSKMAGRDWLVSFMARNDISVRKPEATSINRITAFNKTEVQLFYQLLGELMAKHKFVKGKKAVCSAKDKKKGKDITKGKGQGKNTILPKKETERVKRKILQESNDTTVSDIGTDDLCQDDELDDADDTGNSPVNYIDEHKVVIDNLYKDVIEALRCSATIGNSTPANRKTKSFKGWNKYVSEAQGEARRLFQAWVWYNRPKSGPVCDAMIESRRLFKSRLKWCQKHEEQIKFDKMASLHSKKDFRQFWKCTNRMSTKPGLPASVDGVSDPKQIADLFRHFFLVESPLGPSCSEHETETIIEPVIVGAKIAAKDVAIVIRNMSRGKSPGHDGLSIEHLQHAGPHLPRVLALLFTLCLRHSYLPTELMKTIVVPIVKNKTGNTSDKTNYRPISLATIVTKVLDGLLNTQLDKYIHLHDNQFGFRPGLSTESAILCLKQTVKYYTDRDTPVCACFLDLSKAFDLVRYDILWKKLVGMKVPQEFISIFKFWYRGQINSVRWAGALSEPYRLECGVRQGGLTSPKLFNLYINALIAELSSTHIGCHVEGVCVNNISYADDMVLLSASPCGLAKLIAVLLKLNAKPLKLVTQFKYLGHIVTSDLKDGADFERERRALAVRANMIARRFARSSSPVKVTLFRAFCSSFYTSSLWVNYTQKQYSALRVQYNNAFTVLMGLPRYCSASTMFAEARVAASLPSCASEPPRYLAGDLRHRKERRGRAAPQPDAAPPHRRSVYKPPRARIKLEFGQRSHAPPALPPSYPSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -