Efoe015262.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747100.1:26080280-26086451[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 7.9e-06 26.7 0.0 3 32 27 56 25 63 0.91 2 2 7.8 4.8e+03 -1.4 0.1 14 25 233 244 229 244 0.87
Sequence Information
- Coding Sequence
- ATGGTGCGTACATATGTTAGAAAATATACAAACACAAGAAACGGAAATGCATATCTGCCATATCAAAACTACGACCTTGAAAAGCTTCAAGAAGCAGTAAATTGTGTCAAGGATGGGAGAATGAGCTTAACTCAGGCAGCGAATACATACGGCGTTCCAAAAAAAAGTGTTTTGAGAACTTGTGAagaatttaatatttcatttgtatgtTTGCCCCCCAAAACTACCCATTTACTGCAACCCCTTGACGTTGCATTTTTTGCACCTCTGAAGGCTTACTGGAGAGACGTTCTCACTAAGTGGAAACTTACCGAGGGAAGAAAACACAAAACATTAGTCAAGAGCGCATTTCCCAAGCTATTGTGTAAACTTAAAGACAAGTTAGTTGAAAATGATTCCGAATCTGAAAACTTGAAGGCTGGTTTCAACAAATCTGGACTGTACCCTGTTGATCCCAATCGTCCTAAATCAAGACTACCCCAATCTGAGACTACCAGGCCTGAAGCAGAAATTGAGGATGCTGCATCTTCAGCTATAACTAATATTTTAATGGAAATAAGAAGCCCTGTAGTCGCAGAAGAGGGAACGAGAcgaaaaaagagatttattgttgAACCAGGTAAGAGCGTAACTGCAGAAGATTTAAGCAAACATCAGAATAAACAAACAGCAATttcaaaaagaaacaaaacatcAAATGAAAAAACGGCAATTTCAAAGGcttcaagaaaaaaaacatcaaaatctTCTAAGCCCAAGCCAGATCAGACGCAGTTATTGCCAGACCAGACAGAGTCGATGCCAGATCTGACGCAGTTGATATCAGACCCATATATTGATCCTATTCCTGGCACCTCTGGATTATGTAACATAAACAATACAGAAAGTTACATGTCCGATGAAGAAGTTTATGCCCCTGTTTCCATGCCAATGCCTTCATTAGGACCGATAGAGGGTAAAGGTAAAGGTGTAGGGAAAAAAACGAAAcctaaaataattgaaatacctTCAAATGAAGAACAACCTAACAAAAAGAGAGCTAAAAGGAAGAAACAGATAAGAAGATCAATAGATTCATCCACTAGCGTTTCGGACTGCGATATAATGAGTATACACAATGATTCTAACATAGGTGACTGTGTTAGCGACGTAGAGGATGATGAATTTGATCTTGCCTTTGAGTCGAATTCAGAAACTAAAACTAAGACTGCAGATAAGACTGATTTAGTTAATGCAAATGAAGAGACTGACTTAATCCCGAACGACATCATGAACGACATCATGAACGACATCATGAACGAAAATCATCGTGAAGACGAGATGGTCATGAGTCAGGACCATTCACATTCCGTTTGCGACGAAATGACAAATACCTCAGATGACTTCGAACTGAACCATGAATCTGATTTGGTTATTAGTCAGGACCCTTTATATACTAAAGAGTGGGACGCCGCAGGATCACCATCGGCATTCGACTGCGTGCGTCCCGGCGGGCAGCCCACAGGGTAA
- Protein Sequence
- MVRTYVRKYTNTRNGNAYLPYQNYDLEKLQEAVNCVKDGRMSLTQAANTYGVPKKSVLRTCEEFNISFVCLPPKTTHLLQPLDVAFFAPLKAYWRDVLTKWKLTEGRKHKTLVKSAFPKLLCKLKDKLVENDSESENLKAGFNKSGLYPVDPNRPKSRLPQSETTRPEAEIEDAASSAITNILMEIRSPVVAEEGTRRKKRFIVEPGKSVTAEDLSKHQNKQTAISKRNKTSNEKTAISKASRKKTSKSSKPKPDQTQLLPDQTESMPDLTQLISDPYIDPIPGTSGLCNINNTESYMSDEEVYAPVSMPMPSLGPIEGKGKGVGKKTKPKIIEIPSNEEQPNKKRAKRKKQIRRSIDSSTSVSDCDIMSIHNDSNIGDCVSDVEDDEFDLAFESNSETKTKTADKTDLVNANEETDLIPNDIMNDIMNDIMNENHREDEMVMSQDHSHSVCDEMTNTSDDFELNHESDLVISQDPLYTKEWDAAGSPSAFDCVRPGGQPTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -