Efoe011755.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747098.1:27752497-27756150[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-07 0.00013 22.8 0.1 10 41 2 34 1 37 0.86 2 2 1.3e-09 7.7e-07 29.9 0.2 4 39 60 95 59 101 0.92
Sequence Information
- Coding Sequence
- ATGGCTGCTGTTAAAGAGGGACTTTTGTCCCAGCGTGCTGCCGCCGCGCGCTATGCTATTCCCAGAAGAACGTTGAACAGCCATGTTAAAAGTGGAAAAGTTGAAAGACACTTAGGACGCCGATGCAACATCGAAGACCCTTTCTCTAAGAAACGTCGGGCACTTTGGTCAATCCAACAATTAGAAGCTGCAATGGCTGCTGTTAAAACGGGACTTTTGTCCCAACGTGCCGCCGCCGTGCGCTATGCTATTCCCAGAACAACATTGACCAACCACCTTAAAACTGGAAAAGTCGAAAGACAGTTAGGACGCCATACGACATTAACTGCAGAGCAAGAAAGTGAATCTATCAAAATATATGGCGAAGGCAAATCCAAGAGGCTGTTTTACCAGGACTTCATATTCACGCCGCATTACCAACGCACGGTCAACAATGTACTGAAAACCAGGTGGTATTGTCGCCGCCAGCACAGAGGCTGCAGAGCTGTCATTTACATCACTGGTGACCAAATCAGCAGCCTCAGAACAGAACATAACCACGAGATTCCTTAA
- Protein Sequence
- MAAVKEGLLSQRAAAARYAIPRRTLNSHVKSGKVERHLGRRCNIEDPFSKKRRALWSIQQLEAAMAAVKTGLLSQRAAAVRYAIPRTTLTNHLKTGKVERQLGRHTTLTAEQESESIKIYGEGKSKRLFYQDFIFTPHYQRTVNNVLKTRWYCRRQHRGCRAVIYITGDQISSLRTEHNHEIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -