Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963556455.1
Location
OY747112.1:7612362-7638969[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-30 3.7e-26 92.6 0.1 1 89 645 731 645 731 0.96

Sequence Information

Coding Sequence
ATGCAGCAGGATGAGCCTCCATTCCTGCCTGTGGGCACTGATGTCAGTGCCAAGTACAAAGGTGCATTCTGTGAGGCGAAGATCAAGAAAGTGGCCAGGAGCATAAAATGCAAAGTCACGCTGAAGACTGGAGGCAACATAACAGTGAATGATGACGTCATAAAGGGAACCCTGCGCGTCGGCAGCACAGTGGAGGTGAAGCAGGACCCCAAGAAAGATGCAGTGGAAGCCGTCATCACCAAAATACAGGACTGCAGCCAGTACACTGTTGATGCACGGGACCGTATTCTGTCCCAAGTGGGTGCTCAGCAGGGAGACCCTCTTGACCCTAACACCTTCAGCCTCGCAATTCATAATGTTATCGTCGACCTCAAGTCCCCTCTTAACATCTGGTACCTCGATGATGGGACCATTGGAGAAGGCGACAGGGCGAGCATACCGTACGTGGCCGGCGCCTGCCCCCAAGGTTCGGCTCTCAACCCGGGGGCGGCCATACCCAAAAACCTCAAAGTCCAGTGTGCTTGGGATGACGTAGGATGTAAAGCCGTCCTCGATCGGCTTGTTGATGAGGCTGCTAGGGCAGATCTTGCGCGACTGCTGGCGGTGGCGCGGTCAGAATCTGGAGCATGGTTGCAAGCGTTACCTTCGCCTCAATTGGGTACGCTACTCGATGGTGACTCTTTGCGTGTGTCCGTTGCTCTCCGCCTGGGCTGTGATGCATCCGCCTCACATGCCCTCAACGACATCGTGCAGAAGGCTCTTCGATCCGCGGGCGGTCCGTCCGTGCTTGAACCACCTAGTCTTAGCCGCACTGATGGCAAGCGACCAGATAACCTTACTTTAGTGCGGTGGGAAAGGGGGCGGTGCTTGGTGTGGGACGCTACATGTGTCAGCACATTCGCCGCCTCCCATATAAATCGCACTATGGGAACGGCTGGAGCGGCGGCCGAAACGCAAGCAGCGATGAAGCAGCAGAAATATGCCTCTCTAGAACGAGGCTATATTTTTGTCCCCTTAGCGGTAGAAACTGCGGGCTGCTGGGGGCGGATGCGAAACATGTTTGATGACGGCGATATCACGACCTTGCGGCGTTCAGCGCTATGCTTGAAGAGCGGGCGGCACTTTAACGAAAGTGAAACGTTGGACCAGCTGCCCCTCACACACCCGGAGCATTTCTCGACGCCAGTTATAGCTGGCCGACGCGGGAGGAGAGGGCGAGCTGCGTCGGACGAGAGCGAAGGGGAGGTGGGCACGCGGCGCATGCCTGCGGACAGCGAGCCGCACGTGGGGCGCGTGGTGCTGGTGGAGGCGGCGGGCGGCGCCGAGCGTCGGCGCCCGCACCAGCCCGCCTTCCCCGCGCTCGTCGTCGCGCCCACGCCCGCCATCAAGGTCAAGGAGGACTATCTGGTGCGCTCCTTCAAGGACGGCCGATACTACACGGTGCCAAAAAAGGAAGCGCGCGAGTTCCGCAAAGGCAGCGCGCCGATTGAATGGGGCGGCGTGGAGGCGGCGCTGCAGTTCCTCAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGCCGCGCTCTTCAACGAGCCGCGCAACACCTCCGACGACGTGAGTACACACACGGTGCCGCTGGCGGTAGTTCCGCGAGGACAGCTGGAGCAGTATCTGACAAGGCCACTGTCCTATCTCTCCGCCACGACCACGACAGTCAGGAGACTGTGGCGGCTGCCGCGCACCCTGCGGAGCGTCGTGGCGCAGCGCTTGCGCAGCGTCGCGTGGAACCCGTCCACGTGCGCGTCCGCGAACATTCCCGACGCACTGCAGTATCGCGGCAGCCGCAACAGCACCCTTAACGCGTCATTGTACTGTACACGCAAGGTATTCATGGCTCGTTGCGTGTACCTCGACCATAAACTGCAGAGTTCAGATGACGAGCCACGCGAAGAGAAAGACCACTTCGTGGCCCAACTGTACAAGTTCATGGACGACCGCGGCACGCCACTCAACAGGAATCCCACTATTGCCAACAGGGACATCGATCTCTACAGGTTGTTCAGAGTGGTGCAAAAGCTGGGAGGCTACAACAGAGTCACGAATCAGAACCAGTGGAAGACAATAGCAGACAAGATGGGCTTCCATCCGGTCACCACTAGCATCACAAATCTTTGCAAGCAGGCTTACAAGAAATTTCTGCACAGCTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGCTGGTGGCGCACCCACGCGGCGCCCGCACCCCGCCCGCGGGCCGCTCGCTCATCCGCGACCGCGACAAGCAGCCGCCCACCTCCTCCTCCGCGTGCTCCACGCCCACCAACACGTCTCAGGATACAAAGGACAAGGACTCGGACAAGAGCGAGACGGACAAAAGTGAGAAAGAAGAGAAGTTGGAGAAAATTGAGAAGCCCAAAGAGAAGAACCGGGGAAGTGATGAAGAAGATAGTGCCGATAACCAGCCGCTTATTACCACGGCTCCAAAGGTTGAAAAAGAGAAAGAAATCGTGAAGGAAAAAGAAAAAGACAAGGACAACAAGAGCACGACCCCGACACCGACTTCTACTGCTAGCGAGGAGAAGATCGTGGTCAAGCCGCGCTCTCAGTCTCGCAGCCGAGCGATACCCGTAAAAACAGAGGCGTTGGAGAAACGGACGCCTAAGCGACGTCCCATATCGTCCAAAGAAAGTACAAACGCTATCACTCCCCGCGCATCTCGTCGGCCACACGCTTCTACGGACAGTGACAGTTCTGGTAGAGCTTCAAGATGTGGGCCAACAAAGAAAATGCAAAGTCGTCGCAGCCAAAGCGCTAATTCGGCAAGCAGCGGTAACACGATCGCCTCCAACAGCAGCAAGCGACCGCGAAAACGCAAAACTACCGAACCTTCGACGAACGAACCCCCGCGTTCGGGAGGGAACGTCAAGGCTCAAGTAGGGGACAAACTGAAGGTGTATTACGGACCAACGCAGTCAGAATCAAAGGTGACTTACGAGGCGAAGGTGATAGAGATCTCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCCCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCTCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCCCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCCCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCTCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGACTTACTACACGAAGGTGATAGAGATCCCGTCGGAGGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGAATTACTACACGAAGGTGATAGAGATCTCGTCGGATGGCATGCTGCGCGTGCACTATACCGGCTGGAACACGAGGTACGACGAGTGGATCAAGCCGCAGAGGATCGCGCTCAACGTCACGCAGCACGAGATGCGGAACAAGAAGGTTAGTGTGTCGCACGTGAATTACTACACGAAGGTGATAGAGATCTCGTCGGATGGCATGCTGCGCGTGCACTACACCGGTTGGAACACGAGGTACGACGGGTGGATCAAGCCGCAGAGCAGCGCGCTCAACGTCACGCAACACGAGATGAGAACAAGGTTTTGTTTCATTGTCACTGTGACTGACGTGGCTCAGAGCATTAGTAACAGCAGACGGGTCAGGTCGAAAAGGACTGAAGAATCATCAGCTCGTTCTGATTCGGATAGCGATTCAGATAGCGACGATAACGTGAAACGGCCTCCTAAGAAAATGGACGACAAGTCGGACATAAAAACGCCCAGGTCAAAAGACGCGAAATCTAGTGACAGCAGTAGTTCGAGTAAACCTCGTAAAAGACCTGTCAGGACCACATCCACGCCCTCTGCTGTATCCCCCGCCAAGAAACCACGCCCCAACTCCTCTTCGCACCAAGGCCGCGACTACGACCTAAATGAAATCCGATCAGAACTGAAAGGACTTCATACAGTTAAGCAGGAAACTGAGGAACCGATCAAGCAAGAAGTGGCCGAGAAGGAGGCCTCGAGCTCACCACAAGCGAGCACGGCAGCCCCAGAGCCTGCTCAGCCGGAGAAACAACCTGAAGATGTCTACGAGTTTAAAGAACCAGAGCCATTTGAACTGGAGCTTCATGATGAAAAGAAGAAACGAACTCATCGAATTTTCGACGATATCTCACCTAGCAAATACACTTCAACATTATCTAAATCGCTAAGCGAGGAAATTTCCGAAGATCCACTGAAAACCCGAACCACTCCTTTACGGTCGCCGTCTTTGTCTCCTTTCAGAGATTTTGGCTCAGCAAGTAATGCACCTGGCCGGCAGAGCCCTGAAGAAGATTCAAAGGATGGTCTGTTCTCGTTAGACGAAGATTCGTTCCCTGGTGATGGGAGCTCAGGACTTCGCTTCGAAGGCTTTATACCGGCGAAGAATCAAGAAACCTACTCCAAGAAAAGCAAGGTCTCTAAACTACGGGAACTGATCGATGATTCGCCTGATAGTAGAGCAGATGACGAACAATCATCGGAAGATGAACCTGAAGATAGAACTATTAAAGAAGAAATGGGGGAACCAAGCTCGAGTTCAGCGCCGACGTCCGAATCGCCAAAATCTCCTGAGCCTGTGAAAGAATCTTCTAATGAATCTGAACATACTGAAGAAGCTGAAACGGAGAACAATATGTTAAGCATGCTGGAAAAAGAATTAGATCTTCTAGATAATATTCCAGAACCAGCGAATACTCCTCCGCCGCTTGTCTTTCCTTTAATTCAAATGAAAGATATACCTATTCCAAGCACACCGTCGGAATCTACAAGTGATAGCACTCCAGACATGAAAGTAGAAATTGTGAAAGAGGAACCACCAATTATTGATTTGGATTCTATACCGCTTCCCACTGATGAACCTAAGGATAAtgtattcaaaataaataaggaaCCAAAAGAAAGCATATTTAAAACGAAAGATCCTACAGAAACTACATTTAAAGTCAAGGAAGCAAAAGAAAATACGTCTAAAGTTAAAGATTTCAAAGAAGTAGAAGTTAAAGAGCCCAGTGAACATGCTCAGAAGCCTAAAGATCTCAAAGAAAGTATTTTCAAACCAAAAGATACTAAAGAAATTACTGTTAAAGCTAAAGATTCGAAAGAAAGTGTTTTTAAACCCAAAGATCCAAAGGAAAATACAGTCAAACCGAAGGATCCAAAAGACATTATAATTAAACCTAAAGATACAAAAGAAACTGTGCCTAAACCAAAAGATAAAGAACCAAAAGAGAGTATTTTCAAACCGAAAGATACTACTGAAAGTATCTTTAAGCCTAAAGAGAGCATTATTAAAGTTAACAAAGAGCcgaaagaaaatattttcaaacttTCTAACCCTAAAGAGAGTACTTCGAAAGCGAAAGACCCAATTGAAAGTTCGTCTAAACCTAAGGACGGAAAAGACACTGCCCTTAAACTTAACATCGAACCAGTCAAGAGCTTGGATGTTAAACCCACTCCTACTATACTAGAGCCTCCGTCGAGTCCTTTGATAGACACGGAAGAAGACAAGTCTGAGCCGGACAGTCCAGCGCGTATTGACGTCATTCCTGAACCACCACCTGCCTTCCTGGTGCAATCTGAAGGGCCCAAGATCGCCGATAAACTACTCAAAGCAATCAACAGCGCTAAACGGCTATCCATGTCCCCACCACCTGTAGAAGATAAACCTCGCGCGCTCACACCTAAAACAGACCTCAAAATCAACAAACCTGAGGGCAAGCAATCGCCTATACCGCTTGAACCGAAACTAACTCCCAAACTGGATGTACTTAAGCCTTTGCCTAAAATAGAGCCGAAGAAAATCAGTCCGTCGAACGTCACGGATTCTATCTTCGGTGAGccttctaactttactgatgcgAAACGCGATCTTGCAGATATCAAGAAAGTCAGGGCAAAAGAACCCTCACCTCCTAGATTACTTAGCCCCTTGAATATCCTGGAACGACGGAAGAGCGTAGCGGACCTGCCCATGCCCATTGCGGGCAAGAACAATAAAGTGCTGAGTGACACTATACAGAAGTTGTCCAGTCAAATCAATTCGAGTCAGACGGTACCTAATGTTGCTATGAACATTAACTTGCCTTTCCCGGCAGCAGACAGAAGCGAATCCAGTGATTCAGACGACTCCGATAGACGGCTTATAATAGACAAGCTGACAGTGGAGGAATGGAGCGGAACAGAAGCGGCGCGCAGCGGACTGCACGCGGGCAAGTCGCCCGGCGAGTGGAGCGCCGGCGAGACTCTGCTCATGCTCGAGGACGCCTGCAAGAACGAGCGCAAGCACAGTGCACGTGTAGTAGTGGCAGGCAGTGCCCGGCCAGCCGAAGACGACAGCAACCTCTCACTGTTGCTATGCGAGGAGACAATCCCTGGCTCGCCCGCGCCCGACGCGGAGCCTCCTCGCGCCGACCTGCACATGCCGTTCGCGTGTGCTCCGCAACACGCCAATAAGGCTGAGGAActgggcgcgggcgcggcgcggtcCCCGGCGGCCGGCGCTCGGCGCGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGTCTATACATGACTACAGCGAGTGACGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCCGCCAGGTCAGTCTATACATGA
Protein Sequence
MQQDEPPFLPVGTDVSAKYKGAFCEAKIKKVARSIKCKVTLKTGGNITVNDDVIKGTLRVGSTVEVKQDPKKDAVEAVITKIQDCSQYTVDARDRILSQVGAQQGDPLDPNTFSLAIHNVIVDLKSPLNIWYLDDGTIGEGDRASIPYVAGACPQGSALNPGAAIPKNLKVQCAWDDVGCKAVLDRLVDEAARADLARLLAVARSESGAWLQALPSPQLGTLLDGDSLRVSVALRLGCDASASHALNDIVQKALRSAGGPSVLEPPSLSRTDGKRPDNLTLVRWERGRCLVWDATCVSTFAASHINRTMGTAGAAAETQAAMKQQKYASLERGYIFVPLAVETAGCWGRMRNMFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAASDESEGEVGTRRMPADSEPHVGRVVLVEAAGGAERRRPHQPAFPALVVAPTPAIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPIEWGGVEAALQFLNNGVLPPHWDRAALFNEPRNTSDDVSTHTVPLAVVPRGQLEQYLTRPLSYLSATTTTVRRLWRLPRTLRSVVAQRLRSVAWNPSTCASANIPDALQYRGSRNSTLNASLYCTRKVFMARCVYLDHKLQSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSACSTPTNTSQDTKDKDSDKSETDKSEKEEKLEKIEKPKEKNRGSDEEDSADNQPLITTAPKVEKEKEIVKEKEKDKDNKSTTPTPTSTASEEKIVVKPRSQSRSRAIPVKTEALEKRTPKRRPISSKESTNAITPRASRRPHASTDSDSSGRASRCGPTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSTNEPPRSGGNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEIPSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEIPSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEIPSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVTYYTKVIEIPSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVNYYTKVIEISSDGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEMRNKKVSVSHVNYYTKVIEISSDGMLRVHYTGWNTRYDGWIKPQSSALNVTQHEMRTRFCFIVTVTDVAQSISNSRRVRSKRTEESSARSDSDSDSDSDDNVKRPPKKMDDKSDIKTPRSKDAKSSDSSSSSKPRKRPVRTTSTPSAVSPAKKPRPNSSSHQGRDYDLNEIRSELKGLHTVKQETEEPIKQEVAEKEASSSPQASTAAPEPAQPEKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLKTRTTPLRSPSLSPFRDFGSASNAPGRQSPEEDSKDGLFSLDEDSFPGDGSSGLRFEGFIPAKNQETYSKKSKVSKLRELIDDSPDSRADDEQSSEDEPEDRTIKEEMGEPSSSSAPTSESPKSPEPVKESSNESEHTEEAETENNMLSMLEKELDLLDNIPEPANTPPPLVFPLIQMKDIPIPSTPSESTSDSTPDMKVEIVKEEPPIIDLDSIPLPTDEPKDNVFKINKEPKESIFKTKDPTETTFKVKEAKENTSKVKDFKEVEVKEPSEHAQKPKDLKESIFKPKDTKEITVKAKDSKESVFKPKDPKENTVKPKDPKDIIIKPKDTKETVPKPKDKEPKESIFKPKDTTESIFKPKESIIKVNKEPKENIFKLSNPKESTSKAKDPIESSSKPKDGKDTALKLNIEPVKSLDVKPTPTILEPPSSPLIDTEEDKSEPDSPARIDVIPEPPPAFLVQSEGPKIADKLLKAINSAKRLSMSPPPVEDKPRALTPKTDLKINKPEGKQSPIPLEPKLTPKLDVLKPLPKIEPKKISPSNVTDSIFGEPSNFTDAKRDLADIKKVRAKEPSPPRLLSPLNILERRKSVADLPMPIAGKNNKVLSDTIQKLSSQINSSQTVPNVAMNINLPFPAADRSESSDSDDSDRRLIIDKLTVEEWSGTEAARSGLHAGKSPGEWSAGETLLMLEDACKNERKHSARVVVAGSARPAEDDSNLSLLLCEETIPGSPAPDAEPPRADLHMPFACAPQHANKAEELGAGAARSPAAGARRALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPASLYMTTASDALLDNTPPTTPDSSLDMSPARSVYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-