Egra001268.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- CSRNP2
- Assembly
- GCA_001014675.1
- Location
- JXPQ01002550.1:19163-22882[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.16 3.3e+03 -2.0 0.0 78 119 95 136 77 150 0.65 2 5 0.11 2.3e+03 -1.6 0.3 60 103 157 200 136 227 0.54 3 5 0.12 2.6e+03 -1.7 0.0 27 121 408 508 405 509 0.55 4 5 4.4e-20 9.2e-16 58.6 0.2 1 41 507 547 506 551 0.94 5 5 4e-68 8.2e-64 215.7 9.6 86 217 555 686 547 687 0.89
Sequence Information
- Coding Sequence
- ATGTTTAGACCAATTAAGAATTTCATCACGTACATACAGAAGAATGCCAGTGGGAGCACAATGTTCGGAAGCGGATCAACGACGACATCAACTATTGAGAGCAGCGCACAGCCTGAAATTACGACGGAGCAAATGCAACCAAGCGAGCAGGCCTTAGAAATAGCGGGAACGGAAGCAACTAGAGCAGCAATGAACGGCACAACCAGCGACAGGAGTGGCAGCAGCGGTAGCAACACCGTCAACANNAGCGGCAGCCGCGGTAGCAACACCGTCAACACGCCTCGAATAACAAATGAAACAGCAAAAGTGATAGAGTCGAGCGCAGCAACAGGTTACAGCGATGCCGATGCCGATGACATCGAGTTGCAGATAAAGAGCTCCGTCATGCTTAAGCCCACGCCCGTGCACACGAATGGCTGCGGAGCGCTGGTGCGAAAAGATGCCTTAACATTGAAGCAAATAGCCAGCGCCGCACTGCAAAAGCAGAAGCCCAATTGGAATGCCGAGTATAGGCAACACAATGCCACAACCAGCACAACAAGAGCCCAAAGCGATACTGCGCTGACGGACGCAGATCCATTGCAAGTGGAGCCAGCGGAAGACATGGACGAAGCATTGAGCGTAGCTCAAACGCCAACTGCAGACGCATGCCAGCAGCGTAGCGAATGCCTGGATAGCCGGCTTGCCACGCCAATCGATGATGAATTGCAAGATTTCGCGCATGATCCGATGGCACATATGCTCAACGACGACATCTGCTCGTTGGACAGTGCCACGGAGCGTACCGCCGATGAGGAGACCCTAGAAGACTTCATCACAGAGGAGGAAGTGGAGGTGGATGTGCAAGACTGCGACGACAGCTTCATCAAATTGGAGGATTTACGCAATCCTGATCTGATCATCGTAAATGACAGCGATTTGAACAGTTCCATTGCGTCGGATGCGCTGTCTGAGGATCCTCTGGCGACTGACAATGAAGTGCCTGTCGCTGGGGTGCTGGACAATTCGACAAATGACGACGCATCGGCGGGCAGCGTCGACATGCTCTGGGATATTAAGTTGCATGACGTGCATGCAGCGAACGTTGAGAGTGACGGTGGCATTGACAGCGTGGAGAGCACGCCCCAACGCTGCAAGGCgcagcagcaccaccagcaATCGCATGCGATTACACCAAAGAACGACAGCGCAATTGCAGGCGAACAGCCAGAAGAGCTGCGCAGCGACGGCGGCTCTGACTCGGGCTTAGGCAGCGAGACACCCGCGGCGCTGCAGACGACACTGCAAAGCCCTGGTATAGACAAAACGCAGAGCGACGGGAAGTTCCTGGACCAAATGAAGCCAAATGCAGTTGCGGCTAATGCTACACACCATAACGACGAGACGCACGGAGAATCAACGAAAACGGTGTCCCTGGTGCAGAAGCCGTTGCGCTCCAATCTGAAGCGTCGCCTTGAAGCTGACGCCGATTCGCTTGACCTAACGGATGGCACAACTGGCTCGTTGTTGCCGACTAAGAAACAGAAACGCTCGATAAACTTTGACAGGGTGCAAGTTTATTATTTTCCGCGCCAACAAGGTTTTGGCTGTGTGCCCTCCGCCGGCGGTTGCACACTGGGCATGGGGGCGCAACATGTTGCCGAGAATCCGCGCGGCTCGTCGAGCGAGGAGAGCGAAGAATCCGAAGAAGACTATCTCAGCGAGGGGAGCGGCTCCGATTTGGATGCGGAGTCGAATGGCTTTCTGCAGCCGATGTCGCCAAAACAGCGGCGAGCTTTGTTGAAAGCGGCTGGTGTGCGCAAAATCGACGCTAGCGAGAAATTTGAATGTCGTGATATACGCAACTCACGCGAAGTGTGCGGTTGTACTTGTCGTGATTTCTGTGATCCGGAGACATGTGCGTGCAGTCAGGCTGGCATTAAATGTCAGGTCGACCGCGCAATGTTCCCATGCGGATGCTCACGTGATGCTTGTGGCAATACTGTTGGGCGTGTCGAATTCAATCCAGCGCGTGTGCGGACGCACTTTATACACACGCTGATGCGTCTCGAGATGGAACATCGCTACGCCTCGCCCGCCTACATGCCTGAGCAAAACGCGAACAGCAGCGCCAACGTTTACTTTCAACAAACAACGGCAACGAGTGCGCACTTTGTCAGCGAATTGCACAGCACGACAGCTGGCGTGGCGGCGGCCATAGGCGGTGGCATACCAGCACAGTATCATCAGCTAGACAGCCTCGATGGCGGGCTCTTCAGTCATGCGGCACAGATTAACGGTCCAACAGCGCCTGCATATGGCGACATGCTACCCAACTACAACACCAACCCTGGCGCCGCAACCACCGGCTATCATACGCTCAATTATGGCAGTGCAACACCTGTTTCCTTGTACTCCAGCTACCATCATACGCTGACGACGACGAATTACGTCAATGCGGTGAGTATTAACAACACGTTTAGCTCGTGCGCGGTGCCTACGGCGCCACCATGCGGAAGCGCAACTACAACTGCCAGCGCAATAGACACACACTATCAGAACAGCGCGCCATGTTTGGCGCTCAGCACGATCACGCCAAGCTctataacaacaacaactttaaaaaCAAGCACGACTGAGCACGTCACCAGCAGTTTCATCAATTTGAATACGCCTGTTGCCAGTTCCTCACGCCTCTCACAAATCAACGATCTGCTGCAGCACAACCGCAACACGACCGCGGCCTTGGTGGCGGTGGCGAAATCACCGAACCTTCTGCTGGGAACCCGAAATTTTCACGAGCTGACCAAAGACGCTGCGACCAAGTTAGACACGCTTGCTGCCTCCGATTCCATAAATACGCCACCCATCATCGAGCCGCCTGCCGCCAACAGCCACACATTCGATTGCGCCGATTCCTTGGCCACGCCAGCTAGTCTAAGCACAACGCAGAACAACTTTATGTCGAATACCGACAGCACACCCGGTGCCAGTTTGCAGCCCATACAAATGGAGCCACCACCTTAA
- Protein Sequence
- MFRPIKNFITYIQKNASGSTMFGSGSTTTSTIESSAQPEITTEQMQPSEQALEIAGTEATRAAMNGTTSDRSGSSGSNTVNXSGSRGSNTVNTPRITNETAKVIESSAATGYSDADADDIELQIKSSVMLKPTPVHTNGCGALVRKDALTLKQIASAALQKQKPNWNAEYRQHNATTSTTRAQSDTALTDADPLQVEPAEDMDEALSVAQTPTADACQQRSECLDSRLATPIDDELQDFAHDPMAHMLNDDICSLDSATERTADEETLEDFITEEEVEVDVQDCDDSFIKLEDLRNPDLIIVNDSDLNSSIASDALSEDPLATDNEVPVAGVLDNSTNDDASAGSVDMLWDIKLHDVHAANVESDGGIDSVESTPQRCKAQQHHQQSHAITPKNDSAIAGEQPEELRSDGGSDSGLGSETPAALQTTLQSPGIDKTQSDGKFLDQMKPNAVAANATHHNDETHGESTKTVSLVQKPLRSNLKRRLEADADSLDLTDGTTGSLLPTKKQKRSINFDRVQVYYFPRQQGFGCVPSAGGCTLGMGAQHVAENPRGSSSEESEESEEDYLSEGSGSDLDAESNGFLQPMSPKQRRALLKAAGVRKIDASEKFECRDIRNSREVCGCTCRDFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNTVGRVEFNPARVRTHFIHTLMRLEMEHRYASPAYMPEQNANSSANVYFQQTTATSAHFVSELHSTTAGVAAAIGGGIPAQYHQLDSLDGGLFSHAAQINGPTAPAYGDMLPNYNTNPGAATTGYHTLNYGSATPVSLYSSYHHTLTTTNYVNAVSINNTFSSCAVPTAPPCGSATTTASAIDTHYQNSAPCLALSTITPSSITTTTLKTSTTEHVTSSFINLNTPVASSSRLSQINDLLQHNRNTTAALVAVAKSPNLLLGTRNFHELTKDAATKLDTLAASDSINTPPIIEPPAANSHTFDCADSLATPASLSTTQNNFMSNTDSTPGASLQPIQMEPPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -