Basic Information

Gene Symbol
-
Assembly
GCA_001014675.1
Location
JXPQ01013215.1:6278-8697[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1 1.5e+03 -0.4 0.0 32 46 129 143 124 143 0.84
2 5 2.9e-09 4.3e-06 27.0 0.2 1 44 149 194 149 196 0.91
3 5 3.5e-05 0.052 13.9 0.0 3 45 206 252 204 253 0.93
4 5 9.1e-09 1.3e-05 25.4 0.0 1 45 259 304 259 305 0.91
5 5 6.9e-09 1e-05 25.7 0.0 3 44 313 355 312 357 0.95

Sequence Information

Coding Sequence
ATGGAGGAAGTATATTTTAATCTTGACGAAttgggaaaaaaatatatggatgAAATTACAAGTATCGTTCAATTAAATAGAGAACACTCAACTGAGAGTGCTCTTGAATTGaataagcaaatgcaaaaaaatcttcTTTTGGTTAGAGATAAATTGATTAGCTTGCAGGATGTGATAAGTATACGTTACAAATTGAATGCAGAAAGGATTGCTGATGCTATGAGCTTTAAAAAGCGTGGAATTAGCTGCACTGGAGCTTATATGCAAGGTCGCTCATTTTTTTATGAGggAAATATGTATTTTAGGGATAGGGATTTGCGGAATTGTCCGAATAATGAAGATTATGAACGGCGGAAAACACAAGATAACGAAATATTCCCAAAGCAACATACACCAGAAGCTTGTGAAGCTATGTGGAACCAATATTTACGACCACAGTTGAATCGTTCTGAGTGGacaaacgaagaaaaaaaattactcttgGAGAAGGCTAcagaatacaattttcaaaactggGCGGCAATTTGTGCTGCATTGAAAGGCACACGTTCAGAATATCAATGCTTTGTGCAATACCATACCGTTATTTGCTACATTCGACCAAACCGTAATCAGAAGTGGCTCGCTGTGCACGACCAAAGATTAATAGATGTGgttaaaacaaatacttttaacAACGTCATTAATTGGGGAGTTGTCTTCGCACATTTTCCAGATCGGAGTAAGCAGACCGTTATGCATAGGTATAACAGCACGCTGAATAAACAGTACAATCGAGGACATTTTACGCCAGAAGAGGATCTTTTATTAATGGCAGCAGTTGAAGAGTTTAACGgggaatttcgaaattttccaCGTTCACTTTTTCCAAATCGTTCAATTTTACAATTGCGCAATCACTATCACTATTGTTTAATAAAACGCAATAAACTGGAACCATGGACACTAGCTGATGATGACCAGCTGCTAAAATTTGTTAGCGTTCATGGTGAAGCGTCTTGGACTAAATGCGCTGAAATATTGACGAACCACACTAGCAATGGCTGTCGCATTCGTTATAACGTCATTAAACGTCATTTTGAAAAAgatccaaatttgaaattagaagACATACCACGTAGGAAACGTGACAGCGGTTACACGAGCACAATTACAGCTGATAATTGGATTGATAAAATTGCCGAATTGCGTGCAAATCCAAATGCCGTATTTAAGGTCAAAAAGAATAAATCCAAAGCGCAAACATTAAAACCGCAAGTAAATGAATTGCCCCATAAAAATACGAAAGCAAAGATTATGTATTATCAAAAACTGCGCTCACAGGAGTTGCGAAtgtataattgctttaaatttgcatataactTTCGATTTGAAggcattcaattcaaaaactgGCCGAACTACAAAAAGGCTGTAGCAAAAGGAATGCaggcattaaattttgatatgagTGATAAAACAAGAACATTTCGGACAGAGGACCGTATGTCGTACGATCGGCgatataaaacaaaactattACTGCAGAATGCCTCAGCACAACCAAAAACAATTGTATTTGGATATAACCTACCGCCTGGTTGGTCAACTGCAATGGCATTCCGtgcattttgcatattaaacGCTCAACCCATTGCTAGAGAGACCATATCCAATAATATTGAAAGCCATTCAGCTTTACAAGTTTTTCGACAAAGATTACGTTCCATATTATACCAGACTACTTTGCTCAATCGCTTGGAtccagataaaataaaattaaatttttcaattttgaaatgttctcCTCAATCAGGACGCAATAAAAGATGTAATACATATGATTTGGCTGTAGAGAGTTCTGCCGCAAAAAGAATGCATTTTGATGCTCgaacaaaaaaagagaataattcaaatgaaaatattgaaataaatgtgttgtATGAACAAATTGCTTCTAGTGAAAATGATGCGCCAGatgctaaaaatatatacagTATTCATGGTGCCGAAACTAAAAaggatattttaattaaaaatgaatatatgtgA
Protein Sequence
MEEVYFNLDELGKKYMDEITSIVQLNREHSTESALELNKQMQKNLLLVRDKLISLQDVISIRYKLNAERIADAMSFKKRGISCTGAYMQGRSFFYEGNMYFRDRDLRNCPNNEDYERRKTQDNEIFPKQHTPEACEAMWNQYLRPQLNRSEWTNEEKKLLLEKATEYNFQNWAAICAALKGTRSEYQCFVQYHTVICYIRPNRNQKWLAVHDQRLIDVVKTNTFNNVINWGVVFAHFPDRSKQTVMHRYNSTLNKQYNRGHFTPEEDLLLMAAVEEFNGEFRNFPRSLFPNRSILQLRNHYHYCLIKRNKLEPWTLADDDQLLKFVSVHGEASWTKCAEILTNHTSNGCRIRYNVIKRHFEKDPNLKLEDIPRRKRDSGYTSTITADNWIDKIAELRANPNAVFKVKKNKSKAQTLKPQVNELPHKNTKAKIMYYQKLRSQELRMYNCFKFAYNFRFEGIQFKNWPNYKKAVAKGMQALNFDMSDKTRTFRTEDRMSYDRRYKTKLLLQNASAQPKTIVFGYNLPPGWSTAMAFRAFCILNAQPIARETISNNIESHSALQVFRQRLRSILYQTTLLNRLDPDKIKLNFSILKCSPQSGRNKRCNTYDLAVESSAAKRMHFDARTKKENNSNENIEINVLYEQIASSENDAPDAKNIYSIHGAETKKDILIKNEYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-