Egra010346.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001014675.1
- Location
- JXPQ01017283.1:2400-17860[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 3.2e-08 33.3 0.0 1 45 408 453 408 453 0.94 2 2 2.2e-19 5.6e-16 58.2 0.1 1 45 920 965 920 965 0.96
Sequence Information
- Coding Sequence
- ATGAactttaataatacaaataccgCATATAATCGGCACAATCGGCATATAAATAATACTGAGCACATTCGCTTATTTCACGTTGCAGGTTTAGAACGTATCGCCGAGGAGTTGCTGGGGTGTAGGAAATGGAAGAATTATCAAGagacattaacaaaaaatcatgtAGATATCGAGCAAACATTGCGATCACCCACAAaagaacagcaacagcaaataaacgACCAAACATACAATTCAAACAGGAGCAACAAATTGGAACGCAACAATTTCGAGTTGcagaattatttacaattaaaccACCGCGAGCCAAAGCAGGAAATCAACGGCACACACGTCGAAGAACAAGACAACGTCAGTACACAACACAAGTTCACAAACggagttcaaaataaattgcaagacACTTGCAACGACCACTTCAAAGAAAGCGGAAATTTAAGAGAGTTAGCTGGCGGTACCAAACAAAGCACAATTACCAAGCATAAGCAGCACATTGCTGACGAAAGAAACAGTGCCAGTAAATACatcacaaacaatattaaagaCGTGTCTGAGAGAACTTCAGTGAGACCAAGCAGTGCAGAATTGCTGGAGCCAGTTGACTGGAAACCGAATGAtaagtgttttttttgtgtcaacGGTAAATTGCTCACAGTGAACGCTAACGGAGAACTAGTGGCCGAATCCGGCCCACAATTGGGCGACTCGGACCACAATACACAACGCCTGGATTCCGAAAGTGAGTCAAACGAATCGACGCATATTGGTGTCAGTGGCACATTGCCAAATCAGTTACATCTACAAGAGCATCTAACGCTAAATGAATTATTGAcatcacaattaaaaaatttaccatcaAATATGACTTCAATGGATGCTATGGTTAAACGTTTAGCTGCTATACAAACCTCAATACCTGGCCAATATCCGAattTCAATTGGCTTTTGgctcagcaacagcagcaacagcaggaacacgagcagcagcagcagcagcaaaatgaaatagCCTCAGTTACGCCAACTACCTCAGAGACATCAATCGCCGCTATTAGCCCTGTACTAAAGGATTCACCCAGTCCCAGTGATGCCACCGGTGAACAACCGTTAGACCTTAGCTCCAAACAATCACCAAATTCTACAATTAGTAGTGATTTAAAAACTATAAGAGTCAAATCACTAAGAGCTACACCAACTCCGTTAGTACGTCGTACGTACACAAATGAAGACTTGTCAAATGCTTTACAAGATGTGATTACTCGTAAGTCTGGAACGCGAAAAGCGGCCGTACAATACAATATACCGCGATCAACAttgcgcaataaaataaataaacttaatagcGAGGCAAAGCGTAATTCTATACCCACAACTGCAACAGAACTGGAGTTGTCAAGTGATGAGGATGGTGAAGAAAATAACTCCCCCACACCTCAACAACCTTTAGAGAACAATACGCAAACAATTGATGACTTTGCCAATCGGTTGCAGACACCAAATACATTAGGTAAATTACCGGAAAATATTAGCAGTGATAACGGTGATGATAATTCTAATGCATCACCAAAACCAAATCTTTatcaatgtgaaaattttaaacgtcAGAGTATCCAATCACAGAGTGGGGTTCTGCCTATGGCACATGAATCACCTCAGTCACACCAGCCTTTAAATTGGATTGAACCAAATATTCAAGTTCTATTGCAATCTCTTATTTTATCGACTGGTGGACTGGCTGCGTTACAACCGAAACTAGATGAACCTGTAACATATCGTGAACTCTTGAGTAATATGTTCCTAAATTTgggcattaatttaaaagatcTGCTCCCGAATGCACAACAGAGCAATCAGCCAATATCTGCAGATGAAAGTAATCCTAATAATGGCAAGGCTAGTGTTGCATTGGAACAGCGCTTACTGCAGCaactacagcagcaacaacatcctGCACACATTCAAAGTGGATTTCTTAAATCTGAAACACCCGATACGACCTCATCGATGGATACTACAGAAGCGTGTGATGATGCTACGTCACTGCTTAAAATTCCGTCCTTCAAACCGGTGGCTGGTTCGACTCTTAACAATTCTAGCTCAGCTGCTGCTATTACGAGTAGTTCCTCAGCATTGGTTTGTAATGCAAATAACATTGgtatgagcaacaacaattctGTTAATAGCAATAGCATACAACGTAATGGCGAAAGTCCTCACTCAGGAGCATCTTCGCATCTTGCCAACTCAATGTTAGCCGCGGCAGTAACGGGTCATCGGCAAGGAAACAGTCTAGCGGATCTCTCGCCTCCACCGCTTCATGGTCAGCAAATGCCAAGTGTCTGTGGTTCTCAAACACCTCCTTCGTTTTCGCTGCGCGATGTGATTACAAATAGCATACAGCGTAAAATGAATGAACACTCATCAAAGGAAACGCACACAGCAGTTTCAATGCTTGGGCTTGGTACGGACAATGAACGCAAGAACAGTAACGGTGATTATAAGAAGCCAACTATTTctgttgtaaaaaatattgGAGGTACTGACACATCACGTTTTGGTACCGCACCAAACCTATTGGCCAGCGGCGCGCTACCCCAAAATTCACATCACACCCACCATTCGCATGCGCATCCACACCTGCTACAACCTAATCACCTCCAACGTCATCAATCTGAACAAATAAGTCGCCAAGAAGCAGCTGCTCTGGCTGCTGGCAAAGGAACGAGGCCTAAACGTGGTAAATATAGGAACTATGATCGCGATAGCCTTATTGAAGCTGTCAAAGCTGTACAGCGTGGTGAAATGTCCGTTCATCGTGCCGGGAGCTATTATGGAGTTCCACACTCAACTTTGGAGTACAAAGTAAAAGAGCGGCACTTAATGCGACAACGCAAACGGGAACCAAAACCCCAGCCTAGCTTAGATGGTAGTGCAAATAGTGGCAATGCTGGTAAGACGAATCCAAACATTCCAGGGCACAATAGCCACGACAAAGTAAAGACAAGCAATTCCAATTCatcaaattcgaaattaagcaATGCACTAAAGAATAACCACATAGCTGCCTCAACGGTCTCAGCCTCAAATGGAATGAAACTGCCGATCTTCGATCCGGCACTAACAAACCCCTATGCGTCTCAGCTATTTTGGCCTACCCAACCTGCATTCAACGCAATGCAGATGGATTTTAATCGAAATACAAGTGCAtctgctgaaatatttaaatcaatgcaaCGTTTTCAGGAAGAAGCTTTACGTGCCGCAAGCGGAAGCTCTGCCACCTTACCAGCAAATGCCGATACTCCCAGTCCACTGCAAAGTCCACTGCCTGGCCAAAATCAACCACCACTGCAAATAACAAGTACTCGGGGATTGGCTGAAAACCTGTACGAAAATGACCTAGATGGAATCATACGGAAAACACTTGATCGTAAGGGTGCCGACGCACTGCAAGCCACGTCTCCTTCGGTGAACTTAAGCAGCTGTACATTACTCGATCAGTTGCTTGTGAAAAAAACTCCACTTCCTTTTACCAGTAACCGTACTACTGACTATATCAGCCCAACTACATCACAGCCCATTAAACGTAGTGGCAGTCCAATCGCATTTGGTGCTGAAATCAAGCGTGAACGCACAAGTCCCCAGCGTAGTACTGACGATGATCATGATGCCGAAGATGACGACGACGACAATGAAACATCATGCAGTGCTCTTGGTACTGACGACACACATCATgaacacaacaataataacaacaataaaaataacaataacagcaatagcaGTAAATGTTTTGATAATCGGCTAGAGCGCAGTCGTCTAACATCGCGAGACTCGGAAACGGATGCCAGCAGCGTCAAAAGTGAGCAACAACAGACTCTGCAACTCCATCACAACAATAATTCAAGTAACGATGGGAAACTTGCGACTGTGAATGGTAAAAGCGTCATATTGGATACAGGAAATTCCATATTACAAGAAAAACTGGCACAAATTAAAGCGGAGCAAGCAGACACTGAAGAGAATCTATAG
- Protein Sequence
- MNFNNTNTAYNRHNRHINNTEHIRLFHVAGLERIAEELLGCRKWKNYQETLTKNHVDIEQTLRSPTKEQQQQINDQTYNSNRSNKLERNNFELQNYLQLNHREPKQEINGTHVEEQDNVSTQHKFTNGVQNKLQDTCNDHFKESGNLRELAGGTKQSTITKHKQHIADERNSASKYITNNIKDVSERTSVRPSSAELLEPVDWKPNDKCFFCVNGKLLTVNANGELVAESGPQLGDSDHNTQRLDSESESNESTHIGVSGTLPNQLHLQEHLTLNELLTSQLKNLPSNMTSMDAMVKRLAAIQTSIPGQYPNFNWLLAQQQQQQQEHEQQQQQQNEIASVTPTTSETSIAAISPVLKDSPSPSDATGEQPLDLSSKQSPNSTISSDLKTIRVKSLRATPTPLVRRTYTNEDLSNALQDVITRKSGTRKAAVQYNIPRSTLRNKINKLNSEAKRNSIPTTATELELSSDEDGEENNSPTPQQPLENNTQTIDDFANRLQTPNTLGKLPENISSDNGDDNSNASPKPNLYQCENFKRQSIQSQSGVLPMAHESPQSHQPLNWIEPNIQVLLQSLILSTGGLAALQPKLDEPVTYRELLSNMFLNLGINLKDLLPNAQQSNQPISADESNPNNGKASVALEQRLLQQLQQQQHPAHIQSGFLKSETPDTTSSMDTTEACDDATSLLKIPSFKPVAGSTLNNSSSAAAITSSSSALVCNANNIGMSNNNSVNSNSIQRNGESPHSGASSHLANSMLAAAVTGHRQGNSLADLSPPPLHGQQMPSVCGSQTPPSFSLRDVITNSIQRKMNEHSSKETHTAVSMLGLGTDNERKNSNGDYKKPTISVVKNIGGTDTSRFGTAPNLLASGALPQNSHHTHHSHAHPHLLQPNHLQRHQSEQISRQEAAALAAGKGTRPKRGKYRNYDRDSLIEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRQRKREPKPQPSLDGSANSGNAGKTNPNIPGHNSHDKVKTSNSNSSNSKLSNALKNNHIAASTVSASNGMKLPIFDPALTNPYASQLFWPTQPAFNAMQMDFNRNTSASAEIFKSMQRFQEEALRAASGSSATLPANADTPSPLQSPLPGQNQPPLQITSTRGLAENLYENDLDGIIRKTLDRKGADALQATSPSVNLSSCTLLDQLLVKKTPLPFTSNRTTDYISPTTSQPIKRSGSPIAFGAEIKRERTSPQRSTDDDHDAEDDDDDNETSCSALGTDDTHHEHNNNNNNKNNNNSNSSKCFDNRLERSRLTSRDSETDASSVKSEQQQTLQLHHNNNSSNDGKLATVNGKSVILDTGNSILQEKLAQIKAEQADTEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -