Egra004260.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- kn
- Assembly
- GCA_001014675.1
- Location
- JXPQ01019676.1:28912-30699[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-120 1.6e-116 390.2 0.0 205 385 1 209 1 211 0.99 2 2 2e-09 2.1e-05 23.2 16.0 422 513 212 311 208 326 0.71
Sequence Information
- Coding Sequence
- ATGCGCAGATTCCAAGTGGTCATTTCAACGCAGGTGGGTGTCGATGGTCCACTGCTGGCTATATCGGATAATATGTTTGTGCACAACAACTCGAAGCATGGGCGGCGCGCTAAGCGATTGGACACAACGGAAGGTACAGGCAATACACAAATGTCACTAACGGGGCATCCCCTTGCGCCAGACAGTACCTATGATGGTTTATATCCGCCCTTGCCCGTTGCAACACCCTGCATAAAAGCCATCTCGCCAAGCGAAGGGTGGACAACTGGCGGCGCCACGGTAATAATTGTCGGTGATAATTTTTTTGACGGCTTGCAAGTGGTTTTCGGCACCATGCTCGTCTGGAGTGAGCTCATCACATCGCATGCCATACGCGTACAAACACCACCACGTCATATACCAGGTGTCGTCGAGGTAACACTCTCATACAAGAGCAAACAGTTCTGTAAAGGCTCACCCGGGCGCTTTGTTTACGTTTCGCTCAATGAGCCAACAATTGACTATGGATTCCAACGTTTACAGAAACTCATACCCCGTCATCCAGGCGATccagaaaaattgcaaaaagaaattatactCAAGCGTGCCGCGGACTTAGTCGAGGCGCTCTACTCAATGCCTAGATCGCCTGGCGGCTCCACGGGTTTCAATTCGTATGCTGGCCAACTCGCGGTCAGCGTGCAAGACGGCACCGGGCAGTGGACTGAGGACGATTATCAACGAGCTCAGTCGAGCAGCGTGAGTCCACGTGGTGGCTACTGCAGCAGTGCTTCGACGCCACACAGCTCGGGTGGCTCCTACGGCACCGGCACGGTAACAAATGGCTATGCCACCACTGCATCTACTGCGCCCAACATGAGCACATTGTCATCGTCGCCTGGCAGCGTCTTCAATTCGACATCAACTAGTGCATTTTCGCCATTAATTTCAACAGTGTCCTCAACATGGCATCAGGCCTTAGTGCAGCACCATCACCATCCTTATGCACATCCGCATCAACCCTGGCATAACCCAGCCGTCTCCGCCGCCACTGCAGCAGTTTAA
- Protein Sequence
- MRRFQVVISTQVGVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTQMSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTGTVTNGYATTASTAPNMSTLSSSPGSVFNSTSTSAFSPLISTVSSTWHQALVQHHHHPYAHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00540831;
- 90% Identity
- iTF_01231379;
- 80% Identity
- -