Basic Information

Gene Symbol
Kdm5
Assembly
GCA_001014675.1
Location
JXPQ01019148.1:2274-7865[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-26 1.3e-22 80.1 0.1 2 89 222 305 221 305 0.95

Sequence Information

Coding Sequence
atgtcaacaaaagtacaattaaatgataatttgacgacagcagcggcagcaacaacaataacaccgTCAAATAATGCGAATAGCACAAATGGCACCACAACGCCTGCCAGACGTCTGCGCACACGCAACTCGACTGGCGGTGGCAATATCAGCGGCAGCGATTCGTCTGCAAAAAAATCAAACGCTAACGATGAGAAGTCTACGGTTTCCAGTGGTACGGGCACTGCTACTGGCGCTGGCACCGGCAccggcactggcactggcacagGCACAGCCAATTCAACAACGTCATCGACTAAAAAATATCACCATAGCTGTccacagccaacaacaacggcaacaccgactgctgcagcagcaacatcgGCACGGAAGGGCTACGCTCATACACAGCCGCACAGTTCGAGCACATTTAATATGAACAAGAATGAAGAATTCCACTTTGACACTCCCGTGGAATGCCCCGTTTTTCGTCCCACGCCAGAGGAATTTAAAAATCCGCTTGCTTATATTAGCAAAATACGTCCGATTGCAGAGAAATGTGGCATTGCAAAGATACTGCCACCGCCGTCATGGTCGCCACCATTTGCAGTGGATGTGGACAAGCTTAAGTTTACTCCACGCGTGCAGCGCCTAAACGAGCTTGAAGCAAAGACGCgtgtcaaattgaattttctcgATCAGATTGCCAAGTTTTGGGAGCTGCAAGGCTCATCGCTGAAAATTCCAATGGTTGAGCGTAAGGCATTGGATTTGTATACATTGCATCGCATCGTACAGGAGGAGGGTGGCATGGAGCAAACCACAAAGGAGCGGAAATGGGCTAAGGTTGCAAATCGTATGGCGTATCCATCCAGCAAAAGTGTTGGCGCGACACTGAAAGCGCACTATGAACGCATACTGCATCCATTCGAGGTATACACATCTGGTAAGGTATTAGGTGCGGTgactgcagctgcagcagcagcggccGCCTCAACTAATGCGACTGGTGATGGCACACAAGTGAAGCTTGAGGATGGCACTGACTACAAAACTCATGAGATACCAACACGCCAGCAGATAGCACCGCCTAATGAGAACAATGCTAGACGTTCAAAGCGGTTTGCCAATTCGAATGCCAATTGCGGTTTGGGCGGTGCAACGCGTAACAGCGGCAATCTGAAAGTGGAGACAAAGGAAGATTTCAAAAGAGATCTGCTGAATTGCTTCAATGCTGCAAGCAATAACAAGCAATCAGCCGTGGCAGGCCGTTTGTCGGGCGCAAAGGATCAGAAGAAGGCGCCTGATCCTCAGTCCTTGGTGGATCCATTAATGAAGTATATATGTCATATCTGTAACCGCGGCGATGTGGAGGAGTCAATGTTACTGTGTGACGGCTGCGATGATAGCTATCACACCTTCTGCTTGCTGCCGCCGTTGACAAGCATACCTAAGGGTGAATGGTTATGTCCCAGGTGTGTTGTAGAGGAAGTTAGCAAGCCGACAGAGGCATTCGGCTTCGAGCAAGCGGAACGCGAGTATACTCTGCAACAGTTTGGCCAAATGGCTGATCAGTTCAAAAacgattattttcaaatgccgGTACATATGGTGCCCACAGAGCTGGTGGAGCGTGAATTTTGGCGCATAGTTTCGTCGATTGACGAAGATGTCACGGTGGAATACGGAGCAGATTTGCATACCATGGATCATGGGTCTGGGTTTCCCACAAAGAGCTCCCTGTATTTATTACCTGGCGATCAGGAATATGCAGAGTCGAGCTGGAATTTAAACAACTTGCCATTGCTTGAGGACTCAATATTGGGACACATTAACGCGGACATAAGCGGCATGAATGCGCCTTGGATGTATGTGGGCATGTGCTTTGCGGCTTTCTGCTGGCACAACGAAGATCACTGGAGCTACTCCATTAACTATTTGCATTGGGGCGAGCCAAAAACCTGGTACGGCGTGCCAGGCAGCTGTGCCGAACAGTTCGAAGAGACCATGAAGCAGGCTGCGCCCGAGTTGTTCGCATCGCAGCCGGATTTGCTGCATCAGCTGGTCACAATTATGAATCCAAACATTCTAATGAACAATGGCGTGCCCGTATATCGCACCGATCAGAACGCTGGAGAATTTGTCATCACATTTCCACGTGCTTATCACGCTGGTTTCAATCAAGGCTATAACTTTGCTGAAGCTGTTAATTTTGCGCCTGCCGATTGGCTTAAAATGGGACGCGAATGTGTAAACCATTATTCGATGCTGCGCCGCTTCTGCGTATTCTCGCACGATGAACTTGTGTGCAAGATGGCATTGGAACCGGCGAAGCTCACATTTGGCATTGCTACAGCATGTTACATTGATATGGCGGAAATGGTCGACTCGGAGAAGAAACTGCGCAAATCACTGCTGGAGTGGGGCGTCACACGTGCTGAGCGAAAGGCATTTGAGTTAGTGCCAGACGATGAACGTCACTGCCAAGAGTGTAATACCACCTGTTTCTTGTCCGCTGTAGCCTGCGAATGCACCAAGTCAATTGTTTGTCTGCGTCACTATACAGTTTTATGCACATGCCCAGCTGAAAAGCATACGCTGCTGTATCGATACACCTTAGATGAAATGCCCCTGATGCTGCAGAAGCTGAAAGCTAAAGCGCAAAGTTTTGAGCGCTGGCTTTCGCGCTGTCGTGATATAGTCGACGCGAGCACGCCTACATCTGTTACACTTGCAGAACTGCAGGAGCTGTGCAAGGAAGCCGAAGTTAAGAAGTTCCCATCCTCGCTGTTAATTGATCGGTTGAATGCAGCCGTCTTGGAGGCAGAGAAATGCGTCACCGTTATTCAGCAGTTGGGCATAAATAAGgTGCGCACGCGATCGGACAACAGCTTGGAGGCAGCTCAATATAAACTCACCATGGAGGAGCTCGAGTTGTTTGTGCAAGAAATTGATAATTTGTGTTGCATTATCGAAGAGGGAACATCCGTACGTGAACTGCTAGTGTTGGGTAAAAACTTTGTGGAGCGCGCAAATGATATCGTTAAGATATCACTGGATGCTGTGGAGGAATCACAATTGGAGGCATTGATAAGCGAAGGCAGCTCGCTGCGCATTGAGTTGAATCAGTTGTCGCAGTTGCATACGCGATTAAAACAATGTAAGTGGTACAAACGTGCACACGGCTTGCGCAATTCCAATTCTAAACTCAGCTATGGTGACATCAAGAGTCTGCTGAATTTGGCCGAGGCCGAAGTAGCGCCAAATGATCCCTTGATTGATAAGGAAATACGCCGTTTACAAGAAATCGGTGCAGCAATTGAAGCATGGGAAGAACAGGCGCAGAAGTATTTCCACACCGTTGCACAGCAGCACGATCTGCTTAACATTGAGCAATTCTTAAAGACAGCGAGTGACATAAACGGACAAGTGCCATCTCACGCTGCATTAAAAGATGCGCTGCGTAGAGCCAAAGAATGGCTGCGCTCGGTGGAGCAATTGCAAGCCAATGATCATTTCCCTTATTGTCATACGTTGGAAGAAATAATTAAGCGAGGCAGTAATATACAAATCAAATTGGACGAGCTGACACGCATGCAAGAGCATGTCAATAGCGCAAAAGAGTGGAAAAAGAACACAGAGTCCGCTTTCCTTAAGCCACGAACGCACTATCAATTGCTGGAGGTCTTGTTGCCACGCAGCGAACCCGTCACAATTGACTCCGATCTCAAGAAACCTTTTAAGGATGACTTTCTGAAAGAAATGAATCCCTCGCAAATTGTAGATTCTTTCAAAATGGCTGAAGAAAAAGAATTGTGTGATATGCGTGAGCTGCGTCGACGGAATATGCAAAAGAATCCATTGCAAGATGAATACTGCCTGTGCAAGTCAGCATTTCATGGCATAATGCACAATTGTCATTTGTGTCGCGACTGGTTCCATGAGGGCTGTGTACCGGAAACAGAACCTCCACAGATGGCGGGACAGTCAAGTCCAGCGGGCAAACCCAAATGGCTCTGTCCATCGTGCGTGCGCTCCAAGCGACCACGTTTAGAAACCATTTTGCCGCTGCTAGTGTCCTTGCAACGTTTACCAATTCGTTTGCCAGAAGACGAAGCACTGCGTTGTTTGGCCGAACGTGCTATGAATTGGCAGGATAGGGCGCGGAAAGCGTTAACCAGTCCCGATGTTACAGCAGCACTTGAGGCCATCGCGTCACATCAacgcaaacaacagcaacaaaagcggCGAACAACAAGTAACGCCATGACCAATAGCAACAATGTGCGCAAGCCACGACGTAGCAGTCAACGCAATTCGAAAGATGTGTCcagtgatgatgatgatgaaggcCGCTTACATATAGTAGAAGACCCTTATAGCAACGATGAGGACGATACAAATAATGCGCATCAGAAATCCAATCACGAAGCTGAATTGAATGACACTAACGAAGCTCTAACATCGACTGCCGAGCTACAGAAATTATTATCGAATAGTGAAACCGAAAATTTAGACGAACTCATGATGGAAGGTGACTTGCTCGAGGTCTCATTAGATGAGACGCAGGAACTGTGGCGTCTATTGTCAATGGTATTACCACCAGTGTGTACCGAAGCGGTTGCGCTAGTTGAAGAGCATCAACAACAACTCGCCAAACAGCCAGCGGCACAACTGGCGCTGAGTGTCAATTCAGCGGCAGAGGACTCCAATGACAGCATGCTGGTGCAGAGCAGTCCCAACAGCAACAGTGGCAGCTTGTCCGGCAGGAATTCAACAAGTGCGACCAAAAAGCGACGTTCATTAGAACCAAATGGCAGCGCACTGCCACGTAAAAAGACAGCTACACCGAACAAGCAACAGCAGCCCGGCTCGGCAACCAAGAAATCTGCACGCAAATCGGAgctaacaaaacaacaacagctacaacaagaTGATAATGCAGAGAACTACACAcccacaaaacaaacaaacggtAACAGTACGACAGGTTCGCAGAAGAAACGCAAACGGATAACTAATGGAGGGTCGGCAACGCCAGCCACGGGTATAACCAGCGGCAACGGTGGCGTAATGGTCGGTGGCACACCAGGGCAGCACCAAAAGAAGAGCACGCAACGCACAACGCATTCCTCGTTAGTGCAGCAGGAGGACGACGAGGAGGAAGAATGCCGTGCAGAGGTTTGCTACAAGCCAACCGGACGCGAAGTCGACTGGGTGCAATGCGATGGCGGTTGTAATGAATGGTTTCACATGTTCTGCGTTGGACTCATACGCTCGCAAGCAGCACGATAA
Protein Sequence
MSTKVQLNDNLTTAAAATTITPSNNANSTNGTTTPARRLRTRNSTGGGNISGSDSSAKKSNANDEKSTVSSGTGTATGAGTGTGTGTGTGTANSTTSSTKKYHHSCPQPTTTATPTAAAATSARKGYAHTQPHSSSTFNMNKNEEFHFDTPVECPVFRPTPEEFKNPLAYISKIRPIAEKCGIAKILPPPSWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMAYPSSKSVGATLKAHYERILHPFEVYTSGKVLGAVTAAAAAAAASTNATGDGTQVKLEDGTDYKTHEIPTRQQIAPPNENNARRSKRFANSNANCGLGGATRNSGNLKVETKEDFKRDLLNCFNAASNNKQSAVAGRLSGAKDQKKAPDPQSLVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKNDYFQMPVHMVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELVPDDERHCQECNTTCFLSAVACECTKSIVCLRHYTVLCTCPAEKHTLLYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIVDASTPTSVTLAELQELCKEAEVKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNSLEAAQYKLTMEELELFVQEIDNLCCIIEEGTSVRELLVLGKNFVERANDIVKISLDAVEESQLEALISEGSSLRIELNQLSQLHTRLKQCKWYKRAHGLRNSNSKLSYGDIKSLLNLAEAEVAPNDPLIDKEIRRLQEIGAAIEAWEEQAQKYFHTVAQQHDLLNIEQFLKTASDINGQVPSHAALKDALRRAKEWLRSVEQLQANDHFPYCHTLEEIIKRGSNIQIKLDELTRMQEHVNSAKEWKKNTESAFLKPRTHYQLLEVLLPRSEPVTIDSDLKKPFKDDFLKEMNPSQIVDSFKMAEEKELCDMRELRRRNMQKNPLQDEYCLCKSAFHGIMHNCHLCRDWFHEGCVPETEPPQMAGQSSPAGKPKWLCPSCVRSKRPRLETILPLLVSLQRLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEAIASHQRKQQQQKRRTTSNAMTNSNNVRKPRRSSQRNSKDVSSDDDDEGRLHIVEDPYSNDEDDTNNAHQKSNHEAELNDTNEALTSTAELQKLLSNSETENLDELMMEGDLLEVSLDETQELWRLLSMVLPPVCTEAVALVEEHQQQLAKQPAAQLALSVNSAAEDSNDSMLVQSSPNSNSGSLSGRNSTSATKKRRSLEPNGSALPRKKTATPNKQQQPGSATKKSARKSELTKQQQLQQDDNAENYTPTKQTNGNSTTGSQKKRKRITNGGSATPATGITSGNGGVMVGGTPGQHQKKSTQRTTHSSLVQQEDDEEEECRAEVCYKPTGREVDWVQCDGGCNEWFHMFCVGLIRSQAAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-