Basic Information

Gene Symbol
ZBTB8A
Assembly
GCA_963970395.1
Location
OZ019973.1:20128912-20131622[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.021 4 9.5 6.6 1 23 126 148 126 148 0.98
2 5 0.00052 0.098 14.5 0.8 1 23 154 176 154 176 0.97
3 5 0.00032 0.061 15.2 4.2 1 23 182 205 182 205 0.96
4 5 0.00025 0.047 15.6 3.0 2 21 221 240 220 242 0.93
5 5 0.00028 0.053 15.4 0.4 1 20 248 267 248 269 0.92

Sequence Information

Coding Sequence
ATGATGCATCACAAGGTATGCTCCAAATTGTGCCGCTTGTGCGGCAAGGAAAAACAGAGGGGAACTGATGTATTCAAAGATAAAGTCAAGGGAGCTGTATTGTGCTCGATAATCAACAAATATTTTCCTAAAGAGgTCATTAATATTGGAATTTCTGACACTTTTTCCAAGTACGTTTGCATGgattgtgaacaaaaaatttgcactTTCGATGAATTTTGCCTAATGGTTGCTAACGTACAGAAGCAACTTACTGCACCCTCTTTGGAAATTGATTTTGCCGAGGACATGCTTTGTCACTTAAAAGAAAACGAGAACGTGTTGGGAAAGAGCGGAGTATCAGCTGGGGTTCTGGATACACGATCAAGAAAAACGCATACTTGCCCATTATGCGCAAAACGTTTCAGGTGCCAAGCGCACTTGGATCGACATAAACGTATTCACACGGGACAACGTCCATTCGCTTGTAACATATGTTCGATGTCGTTCAATCAGCAAGAAATATTGAACAAGCACAAACAGAGTCATCAGTCAAAAAAGGAATTTCGTTGCGCGAATTGTCATCAATCCTTTCGTTACAAACTATCGTTGAAGTCTCACATGATCAACTTTCATACGGAAGTGGACAGCTCGAGAATGAATAATGTTGATCCTTCTTTGAGCTGCACTGAGTGCGGCAAACTCTTCGCCACGCGATACAAGCTCAAAAGACACGCAAGATGCCATACAGGCGAAAGGCCGTTTGCTTGCAGTTATTGCAACAGAACTTTCTCGCAGACCGGAAATGTCAAATCACACGAAGCAAAGTGTCGCCAAAGTCTGGTAGTTTCGTGTCAAATGACTCGAGTGGAAGATAACGCTGCACCAGTAAGTTTGCAACGAGCGCGTTCGTCCCACAATCCAAATGCAACGCTAGACTCTTCGATGATTTCGGCAGCCACTTGCTCCGTTGTTCCCACAGCATCGACTCTGGAAACTCAGCCTCCACCTCATTTTCAACCCATATACATCACCGAAAGTGATGTACAAAAGACAATTAACGAGACAATCAACTCCTCTTCCGTCGATCCAGGGCCGTCGTCTTATCTCATTAAAACTTACGAGAATCCGATTTACATCGACGACGAGATCGAAACTATGCTGGATCGCGATTTGGTTCACCTGGAAGCGAGCAAATTTCCATCTACGAACGTACAGGACAAAGATCCGCTGTGTCTAAACGAACCTGAAACACCGGAATTGTTGCATAGCTTACTTTACGACGATTGA
Protein Sequence
MMHHKVCSKLCRLCGKEKQRGTDVFKDKVKGAVLCSIINKYFPKEVINIGISDTFSKYVCMDCEQKICTFDEFCLMVANVQKQLTAPSLEIDFAEDMLCHLKENENVLGKSGVSAGVLDTRSRKTHTCPLCAKRFRCQAHLDRHKRIHTGQRPFACNICSMSFNQQEILNKHKQSHQSKKEFRCANCHQSFRYKLSLKSHMINFHTEVDSSRMNNVDPSLSCTECGKLFATRYKLKRHARCHTGERPFACSYCNRTFSQTGNVKSHEAKCRQSLVVSCQMTRVEDNAAPVSLQRARSSHNPNATLDSSMISAATCSVVPTASTLETQPPPHFQPIYITESDVQKTINETINSSSVDPGPSSYLIKTYENPIYIDDEIETMLDRDLVHLEASKFPSTNVQDKDPLCLNEPETPELLHSLLYDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01497829; iTF_00343499;
80% Identity
-