Basic Information

Insect: Ephialtes manifestator
Gene Symbol: prdm10
Assembly: GCA_963970395.1
Location: OZ019971.1:124565-130268[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.01 2 10.5 0.6 2 23 575 596 574 596 0.95

2 14 5.5e-08 1e-05 27.1 1.3 1 23 630 652 630 652 0.98

3 14 0.012 2.2 10.3 2.1 1 23 660 683 660 683 0.97

4 14 0.0069 1.3 11.0 0.1 2 23 701 722 700 722 0.96

5 14 0.0034 0.65 12.0 0.4 2 23 736 757 736 757 0.97

6 14 0.00017 0.032 16.1 2.3 1 23 774 796 774 796 0.98

7 14 0.0086 1.6 10.7 1.6 2 23 805 826 804 826 0.96

8 14 0.031 6 8.9 0.1 1 23 833 855 833 855 0.98

9 14 0.00018 0.034 16.0 3.2 1 23 862 884 862 885 0.96

10 14 0.0043 0.82 11.7 2.8 1 23 890 912 890 912 0.98

11 14 0.00027 0.052 15.4 4.4 1 23 918 941 918 941 0.96

12 14 0.0022 0.42 12.6 1.7 1 23 974 997 974 997 0.97

13 14 0.00017 0.032 16.1 2.0 1 23 1019 1042 1019 1042 0.95

14 14 0.002 0.38 12.7 3.4 2 23 1079 1101 1078 1101 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.01	2	10.5	0.6	2	23	575	596	574	596	0.95
2	14	5.5e-08	1e-05	27.1	1.3	1	23	630	652	630	652	0.98
3	14	0.012	2.2	10.3	2.1	1	23	660	683	660	683	0.97
4	14	0.0069	1.3	11.0	0.1	2	23	701	722	700	722	0.96
5	14	0.0034	0.65	12.0	0.4	2	23	736	757	736	757	0.97
6	14	0.00017	0.032	16.1	2.3	1	23	774	796	774	796	0.98
7	14	0.0086	1.6	10.7	1.6	2	23	805	826	804	826	0.96
8	14	0.031	6	8.9	0.1	1	23	833	855	833	855	0.98
9	14	0.00018	0.034	16.0	3.2	1	23	862	884	862	885	0.96
10	14	0.0043	0.82	11.7	2.8	1	23	890	912	890	912	0.98
11	14	0.00027	0.052	15.4	4.4	1	23	918	941	918	941	0.96
12	14	0.0022	0.42	12.6	1.7	1	23	974	997	974	997	0.97
13	14	0.00017	0.032	16.1	2.0	1	23	1019	1042	1019	1042	0.95
14	14	0.002	0.38	12.7	3.4	2	23	1079	1101	1078	1101	0.96

Sequence Information

Coding Sequence: ATGGATTCGAGGGGCCCTCCCGAGGGGGGCCCTATTGACCCACTCGTTTTGCCGATTATCGACAAGTCGTCCGAAATATCGGATAATTGGTCGGCGAGCAATTTGGTTGCCTCGGCATTTAACGATCCATCTAGGAAAGCCAACAACAACACGCTGCTCTTTGTCACAGTTGGCTACATGGAGGATCAGAGTCGAGATTACTCCAAGATGTTTCCAGCTTACGAGCCAGTACCATTTGCCTCTCATCCGGCATCGCCTCTCTCGGATTTCGAACAACGCGTGAGCACCTTAGATCCCAACATGAGCTCAGCGGCAAGATATTCTCCTACCCCTGTACCGCTTCCTCCTCTGCCTTTTCCCAATTCCGTTGTGGTTCTCCAAGGTCCACCGTCGCCGTTTGTTACACCACCGGAGAGTAATGCCAGATCCAACATCAACTACGAAGCTACGCAAAGCTGCGATCAGAACATACCACAGGCCGATGCCGTCAATGACTTTGTTACCAATGGCAATGACAGCTTGGCTTCCGGCGTCGGCGGAGAATTGATCTTGATGCAAGGTGGAAATTCGGAATTGGAAGCCTCAGCTGCACCACTGATGCTCACAGGTATTGCCGGTAGCGAATTCGCCTTGACGAGAGAATTTCTCGTAATGCAAGACGATCAAATAAACGTAATGGGCGGTCTGAGAAACCAAGAAATGAGTGCCGATCGGACAGTGGTGGTGTCACAAACGATCTGTATGGAGGATGAAAATGTCGTTTCGGAATGCGTTTCAATGCCAGAAAAGATTGTGGAGGTTGCGGAGGTTGCGAAGGCGGTGGCTGCGGTGGGAACGGAGAGAGCGATGCCGACAAAAGAAGCTGAAAAAATAGATCCGGCAAGAAGAATGGTAAGACGATCGAGACGGCAGATCAACGATAAAAAGACGTTTTGGTGCGAAGAATGTGACTCAGCTTGTCACAAAGTCGGCGGCGAGTGCAGCAGCACGTCGTCGAAGAACGTACGCACTATTGCCGATGAGCCAGTGCCTTCGCGCGCTATTGCTACATTACCGGGCTCTTATCTCTCTATCAACAAATTACCGGCATCGAATGTAATACCAGGGAGTTCGAACTTTGGGGTTTTCGCTAAACGTAATATTCGCTCACGCACCCAATTTGGTCCGATTGAAGGAATTCTATGGCCGTATTACGGGGCCCCGTTTGACAACGTTTTACCGTTGCTCTATGAAACTGAGACCGGAGAGTTTATGAAAATCGACGTATCGAATGAAAATGCTTCCAACTGGATGCGTTTCGTGAGGCCTGCATCAACGTATAAAGAGCAAAATCTAGGAATCTGTCAGCAGGCTGACGGAATAGTTTTCCTTACGACGAGAAACATTCTACCGAAAGAGGAACTGAGAGCCGGGCCTAATCCAGAATACGCCATACGCAGAAACTTGCCGATTCTTCAGCCTGAAGTGAAAGACGGTGAGCATAAATTCGGTGTGTACCAAAGACAACGAAGACAAGCTCATAAACAAGTGTTGTTGCTCGTTGGACGAAATAATGTGTCTTCTAAAAGACATTTGTCAGCCAAATTTTCCGTACACATAGCAACAACTTGTATCGTACGTCTGTCTAACGTTGGAAACGCGTATTCTATTGTATTGACTTTTTCTCGGATTAAAATAACAGTTGCAACTTTCATAGAACCAAATAGCGACACGAGCGTATGGCCGTGTTTCGAGTGCAATCAGCGCTTTCTAACTTCCGAAAAGCTTCAAAAACATCTCACCATTCATGAAAATACAAAAACGGAAAGCAAGTCGAGAATAAAACGCAGAAAGGTAGCCGTCTCCGCAAACAAACTGTTGAAAGTGGTCGATGGTCAGACTCTATTGTACACCTGTCCGCACTGTCCGAAGGTGTTTCCACGAAGTTACAGTCTGAAGCGGCACTTGTTGATACATCCGGGGGCGAAAGCTCCGCGGTACGAGTGCTCGTCGTGCGGAGAAAACTTTTTGCATCCTTATAATCGCAGTCGtcatatgaaaatatttcacgcCGGTGGAACTAAGGAAAAGGAAAATTCCCGACAAAATTCAACCGAGTGGACGTGCTCGACGTGCAATCTCATATTTGGCAAAGCGAGTTTACTCGCTATACACACTATGGTTCACTCGAGCAACAAGGCTGTTGTCGGTGAAACTTTTGAAAATCGTTGTCCGCAATGCAACGAGCAATTAAAAACGCGCGGTGAATTGATAAATCACGTTTCCAAACACGCTCGTTTAAAAGTACCAAAATCGACGAAAATGACACCACTCGCATCGTACAAGTGTACCATGTGTTACAAACGTTTCGCCACAAAAGTCCGATTACAGCAGCATTATTTGGTGCACGGTGCCGAGGACCAAAAGCCACTGCCATGCAACATTTGCGCCAAACGATTTATGAACAACTCAGCGCTCTCGTGTCATCTCAAAACTCACAGGGAAGACaaacaaatattcgaatgtccTATGTGCCGAGAGCTTTTCGATCAAGTGTTAATGTTAAAAGATCATATCGAAAGACATCGAAACGAAGACGAGACTTTCACTTGTCCTCACTGTCCCCGAAGTTTCGTGAAATATTCGGTTATTCGTAAGCACATAAGAGCCCATCACTGTGAACGAAAGCACAAGTGTCAATTTTGCGCAAAGCGTTTTCCCACTGTAGACAAACTGCGAATGCATTTGCTACGGCACTCCGATCATAGAGAATTTCATTGTGCAAACTGTGAGAAACAATTTAAACGTAAAGACAAACTCAAGGAACACATGACGAGAATGCACAATGCGCAAAGAGTCAAGCGCGATCAGGCATCGCAGAACAATCAAATTAAGAAATTCGTACCGAAGGTTAATCCAACGGATTACAATCGATTTGTCTACAAGTGCCATCAATGTCTCGTTGGTTTCAAGAGACGAGGTATGCTCGTTAATCACTTGGCAAAACGTCATCCGGACGTTGCCCCTGAATCGGTACCGGAATTGAACTTGCCAATTTTACGACAAACACGAGACTATTACTGCCAATACTGCGACAAGGTGTACAAAAGCAGCAGCAAGAGAAAAGCGCATATCGTGAAAAACCATCCCGGAGCGGCTCTGCCTCCGAGCAATCGTCACAAAGAGGCGGACGTAATCGGTCTGCCGAACCCGACATTCAGTCAAACAGTCGGAAGCATCAGAACAACGCCACAGAGTTGTCAATGGTGTCACAAGCAGTACGCGAGTAAAGCGAAGCTTCTTCAGCATCAGCGAAAGAAACATTCGGCGTTAATGGCGCCGGCCGATCAGATCCCACGATCGCGAACTCGACCGTTTGGCAAAGGTAGACAGATGCATACGAATAACATTGACGACGGTGATTTTATCATGAGCCAATATGTCGATGACTGCGACGTAGACGCAGATTTTACGAAACCGCCGTTCATTAAGATATCCGATGGCGTTGATACCATAGCCAACGATCTTGAAATGGTGGCTCAGCAGTTTGTACGTATGCGTGACATACGTTGA
Protein Sequence: MDSRGPPEGGPIDPLVLPIIDKSSEISDNWSASNLVASAFNDPSRKANNNTLLFVTVGYMEDQSRDYSKMFPAYEPVPFASHPASPLSDFEQRVSTLDPNMSSAARYSPTPVPLPPLPFPNSVVVLQGPPSPFVTPPESNARSNINYEATQSCDQNIPQADAVNDFVTNGNDSLASGVGGELILMQGGNSELEASAAPLMLTGIAGSEFALTREFLVMQDDQINVMGGLRNQEMSADRTVVVSQTICMEDENVVSECVSMPEKIVEVAEVAKAVAAVGTERAMPTKEAEKIDPARRMVRRSRRQINDKKTFWCEECDSACHKVGGECSSTSSKNVRTIADEPVPSRAIATLPGSYLSINKLPASNVIPGSSNFGVFAKRNIRSRTQFGPIEGILWPYYGAPFDNVLPLLYETETGEFMKIDVSNENASNWMRFVRPASTYKEQNLGICQQADGIVFLTTRNILPKEELRAGPNPEYAIRRNLPILQPEVKDGEHKFGVYQRQRRQAHKQVLLLVGRNNVSSKRHLSAKFSVHIATTCIVRLSNVGNAYSIVLTFSRIKITVATFIEPNSDTSVWPCFECNQRFLTSEKLQKHLTIHENTKTESKSRIKRRKVAVSANKLLKVVDGQTLLYTCPHCPKVFPRSYSLKRHLLIHPGAKAPRYECSSCGENFLHPYNRSRHMKIFHAGGTKEKENSRQNSTEWTCSTCNLIFGKASLLAIHTMVHSSNKAVVGETFENRCPQCNEQLKTRGELINHVSKHARLKVPKSTKMTPLASYKCTMCYKRFATKVRLQQHYLVHGAEDQKPLPCNICAKRFMNNSALSCHLKTHREDKQIFECPMCRELFDQVLMLKDHIERHRNEDETFTCPHCPRSFVKYSVIRKHIRAHHCERKHKCQFCAKRFPTVDKLRMHLLRHSDHREFHCANCEKQFKRKDKLKEHMTRMHNAQRVKRDQASQNNQIKKFVPKVNPTDYNRFVYKCHQCLVGFKRRGMLVNHLAKRHPDVAPESVPELNLPILRQTRDYYCQYCDKVYKSSSKRKAHIVKNHPGAALPPSNRHKEADVIGLPNPTFSQTVGSIRTTPQSCQWCHKQYASKAKLLQHQRKKHSALMAPADQIPRSRTRPFGKGRQMHTNNIDDGDFIMSQYVDDCDVDADFTKPPFIKISDGVDTIANDLEMVAQQFVRMRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207577;
90% Identity: -
80% Identity: -