Eman010658.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- ken
- Assembly
- GCA_963970395.1
- Location
- OZ019969.1:44484995-44487598[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.028 5.2 9.1 4.1 1 23 416 438 416 438 0.97 2 9 0.00069 0.13 14.2 4.9 1 21 444 464 444 466 0.95 3 9 1.8e-06 0.00034 22.3 1.7 1 23 472 494 472 494 0.98 4 9 4.5e-06 0.00086 21.0 2.4 1 23 501 523 501 523 0.98 5 9 4.8e-06 0.00092 20.9 0.4 1 23 534 556 534 556 0.98 6 9 7.6e-08 1.4e-05 26.6 0.6 1 23 562 584 562 584 0.99 7 9 9e-06 0.0017 20.1 0.6 1 23 590 612 590 612 0.95 8 9 2e-05 0.0037 19.0 0.1 1 23 618 640 618 640 0.93 9 9 0.00035 0.067 15.1 0.2 3 23 648 668 646 668 0.98
Sequence Information
- Coding Sequence
- ATGAACGCAGAAATTGGATGCTCGATAATGTGCCGGGCGTGTATGAATGTCGACGGCGTATTATTGCCAATGTACGACGACGACATGATCAGTAAGAAAAATTTGCCCGACAAACTTGCCGATCTTGCTTCCATCAGAATTGACAAGTACGATGGCCTGCCAACTGTTTTGTGCGCAAAGTGCGCTTACAGAACTGACTCTTTCTACGACTTTAAACTTCAAGTTCAAGCGACAGAAAGAAAGCTGCGCAAAATGTTTCAGAGCTCAAACGATGAAAATATTACTAGTAAGTATGAAACAAACAGCAGCGATTGCGAGGGTGGCAATTGTCCCAATGCCGATGCGCTTCCACAGGCCAAGTCAAACTTGCTAAGCAAGGAGGaagaattgtatataaattcagCGAGACAGTTGGAACAAGAATTAGAGGTGGACTTAATGCCAAGTTTGAAAAATGAGCAATTCAAAGAGGAAGTGCATATAGTTGATCCCAATGAGCAATGCGAGGAGACACTGCACTTTGTCAATGACCAGTTGGAGGAAAACGTAGGATTGTCCGCTCTTCAAAATTTAGATCACATTTTTATATCCGACATTAACAATATGATTGAGGACAGACAGAATGAATTACAGGATAGAAAGCAAGAAGTTCCTGACGCGATTCAAGAGATTTTCCAGACTGACAACTTGGGTTACACTTTCCTCTATATACCCGATGAGGCCGCTGATCTTGCAGCTCAAAATGCGCAAAATGTCATTCACATGGAAGAAAAGTCCGAAGTGAACGACAGTGAAAAAACAGTTTTTGAATCCGCGTGTAACGAGGACGCGGAAGTTGAGGAAAACGTCGATGAGAAAGATTCTCCGAGCGAGCTGGTATCGTGGAGTCCCGAAGATTCTCGCAATATTGAAGAGTCGGTTATAGAGAAAGGTAAGTGGACGCCGAATATATACGATATTATCGGCAACGACGGCGTAAGCGAAGCTACAAAACCAAAGCGTAACAATGCCAAATCAAACATGAGCAAAACAACATCAAAAAACGAAGATTCCGACTCGGATTACTTCGTTGATCCTCAGGACAACCTTTTGGGCAGCCTAAACGACACTATTATGAGGATAAAAGAGATAAAAGTAGAGGGCGATGAGATAAATTATCAATGCACTCTGTGCATGCAAAATTACGATAAACTTACGGGTGTATTAATACACACGGTGGACAATCACGTACCGAGTAGCGGGCCATTTTTTTGCGTTGTTTGCGAGAAAGATTGCGAGAGTCATCGTGATCTTCGGTCCCACGTGAAAACTCATAACGGCAGGTTTCCGTACACTTGTTTTATCTGTAACAAAGCGTATTCGATGAAGAGGTACCTCAAGAGGCACATGTCTTGTCACACGGACTTTCCAAGACATCGTTGCCCAAAATGCGGTATGCGTTTCAGCGTTAAAACCGAATTGGAGACGCATGTCAGGACTCACGTTCACGGAGGCGCTCCCTTCGAATGCAGTCAATGTCCGAGAGTATTTAATCACAAGGGCAATTATAAACGGCACTTAATCAGTCATCTTGATCCTCACGGTCTTCATTTGCCGAAATATCCGTGCGAGGTGTGCGGGAAACGTTTTTTGAACAATCGCACGCTCGAAACTCACATGCGCGTGCACACAGGCGAAAAACCATTTCAGTGCGATATATGCAGCAGATCTTTTTCGCAACAGGGCAATTTGTTGAATCATCTGAGAATTCACTCGAATCCGCGAAGTTACACCTGCGAAGTGTGCGGCAAGCGTTTCAATCAGCGAGCGACTCTTCGGGATCACAGTTTATTGCACACCGGCGAAAAACCCTATGTGTGTAACGTATGCGGTGTTGCGTTTACTTTTAGTGCAGCACTTCGGCGACACATGTGGACACACGCGACCGACAAACCCTTCGGTTGCGAAATATGCAACGCCCGTTTCGTCGGTAAATACGATATTAAAAGACACATGAAGATTCACACCGATCGGCCCAAGATCAAACGAAGACGCAATCAGTCGAGAAACGACGAAATGGGGCAAGACATTTCGAGGGACGAGACTCCGTCCGAAACTCAAATATCGAACGATGGACAAACTATATTCATCGAACATCAGGTTCTACTCGCCCAAGATCCGACGCAAATTCGGCCGCAAGAAGAGGCGGAAAAGGAAAACGTCGATGCTCTCTTCAATCTCATACAGTACGGCTAA
- Protein Sequence
- MNAEIGCSIMCRACMNVDGVLLPMYDDDMISKKNLPDKLADLASIRIDKYDGLPTVLCAKCAYRTDSFYDFKLQVQATERKLRKMFQSSNDENITSKYETNSSDCEGGNCPNADALPQAKSNLLSKEEELYINSARQLEQELEVDLMPSLKNEQFKEEVHIVDPNEQCEETLHFVNDQLEENVGLSALQNLDHIFISDINNMIEDRQNELQDRKQEVPDAIQEIFQTDNLGYTFLYIPDEAADLAAQNAQNVIHMEEKSEVNDSEKTVFESACNEDAEVEENVDEKDSPSELVSWSPEDSRNIEESVIEKGKWTPNIYDIIGNDGVSEATKPKRNNAKSNMSKTTSKNEDSDSDYFVDPQDNLLGSLNDTIMRIKEIKVEGDEINYQCTLCMQNYDKLTGVLIHTVDNHVPSSGPFFCVVCEKDCESHRDLRSHVKTHNGRFPYTCFICNKAYSMKRYLKRHMSCHTDFPRHRCPKCGMRFSVKTELETHVRTHVHGGAPFECSQCPRVFNHKGNYKRHLISHLDPHGLHLPKYPCEVCGKRFLNNRTLETHMRVHTGEKPFQCDICSRSFSQQGNLLNHLRIHSNPRSYTCEVCGKRFNQRATLRDHSLLHTGEKPYVCNVCGVAFTFSAALRRHMWTHATDKPFGCEICNARFVGKYDIKRHMKIHTDRPKIKRRRNQSRNDEMGQDISRDETPSETQISNDGQTIFIEHQVLLAQDPTQIRPQEEAEKENVDALFNLIQYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497668;
- 90% Identity
- -
- 80% Identity
- -