Eman010119.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- -
- Assembly
- GCA_963970395.1
- Location
- OZ019969.1:32233249-32245691[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.5 4.7e+02 3.0 0.2 3 17 65 79 63 80 0.86 2 13 0.0011 0.2 13.6 0.2 1 23 288 310 288 310 0.95 3 13 3.1e-05 0.0059 18.4 1.2 1 23 318 340 318 340 0.98 4 13 1.4e-05 0.0026 19.5 0.4 2 23 348 369 347 369 0.97 5 13 4.3e-06 0.00082 21.1 0.7 1 23 375 397 375 397 0.98 6 13 3.3e-05 0.0062 18.3 2.0 1 23 404 426 404 426 0.98 7 13 5.1e-06 0.00097 20.9 0.6 1 23 432 454 432 454 0.96 8 13 1.4e-05 0.0027 19.5 0.2 1 23 460 482 460 482 0.98 9 13 7.3e-07 0.00014 23.5 1.2 1 23 488 511 488 511 0.96 10 13 3.8e-06 0.00072 21.3 0.5 1 23 517 540 517 540 0.96 11 13 5.9e-06 0.0011 20.7 2.8 1 23 546 568 546 568 0.99 12 13 9.4e-05 0.018 16.9 0.4 1 23 574 596 574 596 0.94 13 13 0.00038 0.073 15.0 0.2 1 23 602 626 602 626 0.94
Sequence Information
- Coding Sequence
- ATGACAGCAGATACGATGAAGGATTCCACCCACTGTCTTATATGCAACAGCAAAGTTGGTGTCTCCACACGCAACAGTATTCGCATCTTCAATGAGACTTTTATTACTCCTTCCGAAAAACCTCTCATTGAAACCATCTGTGCCATTCTTGAAAAGGACGTTAATGAGCAAACTGCTCATTCTGTTGtgatatgtaaaaaatgttataagctGTTCACTGAGtATGACGAATTGGAGAACAGAATggctgaaataaaaatggaaatctACAACAACTAtgagaaaacaatgaaaaaagtaTCTCCTAATGTTCAGATGCAGGATGAATATAATGATCACGATTACATTGATAATTCGGATAGTCAAATTGTTGAAGCTTTGAACAGTAAATATGATCAGAAGGAAAGTGAAAGTTCGTCCCCTGTGAAGAACACAAAAACAGAGGTTGGAACTGAAGCAGAAGCTCAAGCAGAAGCTGAAGATGAAGCTCAAGCTGAAGATGAAGCTCAAGCTGAAGCTCAAGCTGACGCTGAAACAGAAGCTGAAGGAGAACAAATGACAGAGTATTTCATAGAAGAAATCGACAAAGTTCAAATGGACGAAGCGGAGTACATAGATGAATCCGAGGTATTAACTGTAAAAGTTGAATCATCAccagaatctgaaaaaaattccgagGCAAAAAGGAGCCAAGCGAAAAAAGCCAAAACTAGTATAAAATTTGAGGAAATTCAGGAGGAAATTGTTACGAGAGAAGGTAGCGAATACACATGCCAATTGTGTACAAACGAGGAGAAAAAGTTCGTGGGCGACGCGAAGGAGATTGTGTCGCACGTAAAAACTGTTCACGATTCGCGTTTGTACATCTGTGATTTGTGTggaatggattttaaaaaaagaaacgaattgtCGGTCCATCTTGACGATCACGTTGCCAAGGAGGAGGGAGATTTTCAGTGCGAAGTTTGCAACAGGATATTCAGCAACTTGCGACTATTTAGAATTCACAAACGAATACATTATCCGCAAGTTAAATCCTGGCCTTGTGAAACTTGCGGAAAGCGTTACAGTTCGAAGAATCTATTGGAAGAGCATACCAACACACACACTGGAATTCGACCGTATGTGTGCGAAACTTGCGGCAAAGATTTTGCCTCGAAGTATACGTATAAGGCGCACGCAAAGACTCACGAGGTTCGGCCGAGACCGTTTGAGTGTTCGCAGTGCAACAAATCGTTTCTGAGCCAACAAAATCTCAACCAACACGAGAGGACACACAACGGGGTCAAGGAATACGTGTGCCACCAATGCGGAAAAGCTTTTGGCTCTCCCCACAATCTCGAAGTTCACAATATCGTCCACACGGGATATAAACCCTACATATGCAGAATGTGCGGCAAAGCATTTGCCCGAAAAGCCGAAATACGCGATCACGAGCGAACTCATACAGGCGAAAAACCCTATCAGTGTGAATTCTGTGGAGCTACTTTCAGTCAACGATCGAATCTCCAATCGCATAAACGCGCGACTCATTACAACGACAAGAGGTACAAGTGCGACGACTGTGGAAAGGGTTTTAAGAGGAGAAGACTCTTGGATTACCACATAAAGGCTGCACACACTGGCGAAAGACCCTACAAATGCGAAACTTGCACAGCGACTTTTGTTTATCCTGAACACTTCAAGAAACACATGCGCATTCACACCGGAGAAAAGCCGTACTTATGCGAGGTTTGCGGAAAAGCATTCAACAGTCGTGACAACAGAAACGCTCATCGATTCATTCACAGCGACAAAAAACCTTACGAGTGTCTGGTTTGTGGCATGGGATTCATGAGAAAACCATTGCTGTACACGCATATGCAGACGCAGGGTCACTTGAACGACACAATCGTTGTGAATCAACCGAGGTTGACGACCGAAGAAGATCAGATCCTTGGACTTCCTGATGGAGATGTAGAATTGCTAATGGAGGAAAATGATACGGAACAGCTTGAAGAAACTGAGTTGTACGTTGCAGAACTCAAAGATCACGTTATCATTCAGCAGGGAGGCGAACACATTTATCAGGAAGAAAGTGTAATAAATATTCCAACAGAAGAGGGTATAGGAGAGGAAGAAGTCGATCATCATATGGTCGTCGATGGACAGatGAACTTCGCGGAAACCGAAGTACTTGAGTGCAAGTCGGAGGACAACGAGCAACAAGTCGAAGAGGTTTACAGTTACGATACGGGTGAAGACGGCGAAACAATCGTTGTTCCAGCGACATCCAAGTACAAAGAGATCGTAGGCGGAGACAAGGTGCGACTTGTACAGATAAGGATACCATCATCGACGGCTGGTGAAGCCAGAAGTTGGCTCAGTCTCGTACAAAACACATAG
- Protein Sequence
- MTADTMKDSTHCLICNSKVGVSTRNSIRIFNETFITPSEKPLIETICAILEKDVNEQTAHSVVICKKCYKLFTEYDELENRMAEIKMEIYNNYEKTMKKVSPNVQMQDEYNDHDYIDNSDSQIVEALNSKYDQKESESSSPVKNTKTEVGTEAEAQAEAEDEAQAEDEAQAEAQADAETEAEGEQMTEYFIEEIDKVQMDEAEYIDESEVLTVKVESSPESEKNSEAKRSQAKKAKTSIKFEEIQEEIVTREGSEYTCQLCTNEEKKFVGDAKEIVSHVKTVHDSRLYICDLCGMDFKKRNELSVHLDDHVAKEEGDFQCEVCNRIFSNLRLFRIHKRIHYPQVKSWPCETCGKRYSSKNLLEEHTNTHTGIRPYVCETCGKDFASKYTYKAHAKTHEVRPRPFECSQCNKSFLSQQNLNQHERTHNGVKEYVCHQCGKAFGSPHNLEVHNIVHTGYKPYICRMCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAAHTGERPYKCETCTATFVYPEHFKKHMRIHTGEKPYLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGMGFMRKPLLYTHMQTQGHLNDTIVVNQPRLTTEEDQILGLPDGDVELLMEENDTEQLEETELYVAELKDHVIIQQGGEHIYQEESVINIPTEEGIGEEEVDHHMVVDGQMNFAETEVLECKSEDNEQQVEEVYSYDTGEDGETIVVPATSKYKEIVGGDKVRLVQIRIPSSTAGEARSWLSLVQNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00414498;
- 90% Identity
- iTF_01497643;
- 80% Identity
- -