Eman012787.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- -
- Assembly
- GCA_963970395.1
- Location
- OZ019970.1:15949719-15952307[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.8e-05 0.0073 18.1 6.4 1 23 345 367 345 367 0.99 2 15 0.0019 0.35 12.8 4.7 1 23 373 396 373 396 0.97 3 15 1e-05 0.002 19.9 0.8 2 23 489 510 488 510 0.97 4 15 4.4e-06 0.00083 21.1 1.6 1 23 516 538 516 538 0.98 5 15 0.0071 1.3 11.0 0.2 1 23 544 566 544 566 0.97 6 15 4.1e-06 0.00078 21.2 1.3 1 23 581 603 581 603 0.98 7 15 7.6e-06 0.0014 20.3 1.2 3 23 611 631 609 631 0.98 8 15 1.3e-05 0.0025 19.5 1.9 1 23 637 659 637 659 0.98 9 15 0.00093 0.18 13.7 0.2 1 23 665 687 665 687 0.99 10 15 7.1e-06 0.0013 20.4 0.3 1 23 693 716 693 716 0.94 11 15 2.1e-05 0.004 18.9 1.3 1 23 722 744 722 744 0.98 12 15 0.00046 0.087 14.7 4.7 1 23 750 772 750 772 0.98 13 15 8.9e-05 0.017 17.0 0.4 1 23 778 801 778 801 0.96 14 15 5.6e-06 0.0011 20.7 0.9 1 23 807 829 807 829 0.97 15 15 4.1e-06 0.00078 21.2 4.5 1 23 835 857 835 857 0.99
Sequence Information
- Coding Sequence
- ATGGATACAGCTAGGACCACAAGTAACGAGTGGATTCCTTCAAAGGTTTTGCTCGATCCAGAGTTGCCTGTGATGCTCAATGCACCTTTTGCCTCTGTGAAACAAGAAAATTACTCTAATGATACCGCCAGAGAGCTAAAAAGAAACACTGAGGAAAAAGAAAGGACAATAATTCCCATTAGTGTCATTAATTCCCCAGAGATCAAGACTGAAACAACAACAATTAATGGTCTCTCTCGTCATATCTCACCCATGAGAATAAATCACAGAGCTCAAATAGACGTCATAGACATGCAGGATGAAGAATCCATTGTCTATAAGCATCTATTAATTTATGAGGAGCAATATTCTAAGTTTGTCATTCTCAGGGCACTAAAAAGCAAAGAGGCAAAAGAAGCGGCTGCCGAGCTTGTGGAAATCGTGACGACGATCGGAGCACCGCGAATTATTCAGAGTGGTAATGGTCGACAATACGCGGAACAAGTTGTACGAGAGATTCGTATCCTGCTGCGAGATTTTTGTGTCGTTCACGGCGATGCCTCGAAGCACGAAGATCAACGTCGCGATTTCAAGAGCTCGCTGAAATCATGGATGACGAAAAATCCTGGAAGACAATGGCACGATGGTCTGAAGATTCTTCAAGTAATCGAGAATACAACGACAAATTCGCGAAACGGCAAAATTCCAAGTCAGCTTTTTTTTGGAAGGAATATTTGCGAAGATCTGCGAAGAACGATAGGCGGAAAAGGATCGACGGGGAATGTCGGCAAGGACGGCGCCTCAGATTCGACGAATTTTCAAGAGCGCGGCTCGGTCACTAATGATCAGAATCCCCTCGAGGTTCCCATTAGCGAAGCTTGCGGAATATCCGCTGAGCAACACCAAGATGACTCTCGATATATCGATAACAGAGAAAATCTCGTTGGAGCGAAAGGAAACGAAAAAACGTTAAATTGTGCAAGTATAAACAGCGAATCGTCGATAACGACAGATGTGGTCGAGGCAAACACCGTTGATAgcgaaaaatacaattttcgatgtaaaatttgtcagaAGCACTACGTGAAATTGGGCCATCTGCGAAATCACATGAAAACCCACACGAGAATAGGAAATTTCGAGTGCACAATTTGCTGCAAATCGTTTCGCCTCTCGAGCTTGTACGAAAAGCACATGCAGAGATTTCACGAAGGGCAAAATATAAATGAGAGTTCAGAGACTTGTGAGCGGCTGGAGATGACGAAAAACGACGATGagaatattgtgaaagatgcgGAGAGAAGAAGAATGAAAATTCGACGACTAGAATCCACGGAGTTTCAAGCGGAGTCGAAAAGTCCGAAGTCGCCGTCGTTGTCAGAATCTGTAGTAAATTCGGGGAataaaacttcgaaaaaatcaatttctctGGCCAAAAGAAAACTTAAAAATTGCTcaacaaaattgaataaaaatccactATTGGAGTGCACGTACTGCAAgcaaatattcaattttccaAGCGTTCTTCAGAGGCACATGCGTTCGCATACAAACGAGAGGCCCTACGTTTGTCAAGTTTGCAACAAAAGTTTCAAGCAGCTTGGACATCTGAGTCAGCACGCGCTTACGCACACCGACTACCGATCCTTCAATTGCACGATTTGTGCTATCAAATTTGATTCCCTCGATGCGCTAAAGCTTCATTCTCAGTCGCACAAAGACGAAACTCTCTACCGTTCGAAAGACACTTATCGTCTATTCGAATGCGATAGTTGCAAGAAGGTTTTCACTACGAAAAGCGTTTTGGAGCGTCACATATTCACGCACAGTCACGAGCGTCAATTCGGATGCAAAGTCTGCGGCAAAAGGTTCAAGCAAGCCGGTCACGTTAAGTCTCACATGTTGGTTCACACGGGCGAAAGAAAATTCGAATGTACCGTTTGCTCGAAACGTTTTAGTCTTTCAAATTCCCTTAAGAAGCACATGTACGTCCACAACGGAGAAAAACCGTATCAATGCGATGTCTGCGGCGCTAGATTTCTCGAGAAACGCAATCTCAACGGACATCTCATGACTCATACGAACGAACGACCGTTTTCTTGTAAAATTTGCGGCAAACGTTACACCCTCGCGGACACTTTGAGGCGTCACATAAGCGCCGCTCACGAGGACGGTCGGACTTATCAGTGCGAAATTTGCGCGAAAATGTTTAAGCAACTGGCGCACCTTTCGGTGCACAAAAAAGTTCACAACGACGAAAGGCCTTTTCAGTGTCATCTTTGCGAAAAGAATTTCAAACACAAAAACGTACTAAAGTCTCATTTGGCGATCCATGCTAATGTCAGACCTTTTGAGTGCGATGCTTGCAAAGCCACTTTCGTGAGAAAGACTAATCTACAGACTCACATCACATCCGCGCACATGAACGAGCGTCCATATGTTTGTACAATTTGCAACAAGCGCTTCAAACAAATCAGTCATCTCAACGGGCATATTGTCGTTCATAGCAATTCTATGCCTTATCAGTGCGACTTTTGTGATCGACGCTGTAACAGActtgacaatttaaaaaaacacatgaGACTGCACACGAAAAGCAGGGTGTAA
- Protein Sequence
- MDTARTTSNEWIPSKVLLDPELPVMLNAPFASVKQENYSNDTARELKRNTEEKERTIIPISVINSPEIKTETTTINGLSRHISPMRINHRAQIDVIDMQDEESIVYKHLLIYEEQYSKFVILRALKSKEAKEAAAELVEIVTTIGAPRIIQSGNGRQYAEQVVREIRILLRDFCVVHGDASKHEDQRRDFKSSLKSWMTKNPGRQWHDGLKILQVIENTTTNSRNGKIPSQLFFGRNICEDLRRTIGGKGSTGNVGKDGASDSTNFQERGSVTNDQNPLEVPISEACGISAEQHQDDSRYIDNRENLVGAKGNEKTLNCASINSESSITTDVVEANTVDSEKYNFRCKICQKHYVKLGHLRNHMKTHTRIGNFECTICCKSFRLSSLYEKHMQRFHEGQNINESSETCERLEMTKNDDENIVKDAERRRMKIRRLESTEFQAESKSPKSPSLSESVVNSGNKTSKKSISLAKRKLKNCSTKLNKNPLLECTYCKQIFNFPSVLQRHMRSHTNERPYVCQVCNKSFKQLGHLSQHALTHTDYRSFNCTICAIKFDSLDALKLHSQSHKDETLYRSKDTYRLFECDSCKKVFTTKSVLERHIFTHSHERQFGCKVCGKRFKQAGHVKSHMLVHTGERKFECTVCSKRFSLSNSLKKHMYVHNGEKPYQCDVCGARFLEKRNLNGHLMTHTNERPFSCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDACKATFVRKTNLQTHITSAHMNERPYVCTICNKRFKQISHLNGHIVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKSRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343336;
- 90% Identity
- -
- 80% Identity
- -