Basic Information

Gene Symbol
snpc-4
Assembly
GCA_963970395.1
Location
OZ019975.1:32810318-32817037[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.1 1.6e+03 0.7 0.0 22 43 238 261 225 264 0.77
2 5 6.7e-09 1e-05 27.0 0.3 3 44 272 315 270 317 0.96
3 5 2.1e-10 3.2e-07 31.8 0.2 3 44 326 371 324 373 0.96
4 5 2.2e-11 3.3e-08 34.9 0.0 1 44 379 423 379 424 0.92
5 5 2.7e-11 4e-08 34.6 0.2 1 41 432 472 432 474 0.97

Sequence Information

Coding Sequence
ATGAGTGAACCGGAGGACGATCGAGTTCTTCTCGACGAAATAAAAGCTCTCGAAGATTTTCTCGCGACTGATGAATTGTCGGAACCTTCGGATCTTCCAAAAAACGTTCCAAAACGACATAACCTTAATGATGCACCTCGTCGTGCTAATTTCCAGTCTCGAGGCTTCGGCGAAGTAACGCCCTATCATGAAGGGGAAAATTCCGTCAACAATCGtgGAAAAGATGCGCAATGTCATCCCGAATCGGCTCTGGAGGCCAATCGGATGCTCATCGAACTCCTTACGGAGTCAAAAAACGAGCTCATGTCGATGCTGGAGAAATGCATCGAAAACAAGACGATCGTAGAGGAGAGAATCAAGGAGCGAGCCAAAAATGCAAGGAGCCAGAAAATCTTGATAGGAAGTGCGGGAATGCCGTACTTTAAAGACGAGAAGCAATACGTAGCTCCACGAAACGAAGACGCACAAGAAAAGACCAGAAAAGGCGAACTTTCCGTCGTTCATTTGCGTTATACAAGTCCATGGTCTGCGAGAGACAGAAATATACTTTGGCGAGCGATTCGCCATGAGGCATCGACCGCTGCGCTTAAAATCGAAGGCGAAACTTCGAACATTGCGAGCTGCAGCAGCGGAGGTACCAATGGATCAACGAGGTTCAATTTACCAAAGAACTTTAAGGCCATGGTAGGACCAATTGGGGAGAGAGAATTTGATTGGATGAAAATTGCTGCCATGGATTTTGATAATCGTCACACACCGGAAGAGTGCAAAGTCATGTGGCAAGTCTTTCTCCATCCCGACATTAACAGATACAGATGGAAGAAAGAAGAAGACGATGGTATCAGCACATTgagcaaaaaatacaaatttcaagACTGGGACAGTCTAGCCAAAGAATTAGGCACAAACAGAAGCGGTTACCAATGTTTTATAAGATACAACACGAACAATCAAGCAACGTTCTTAAAAGAAAGCGCCTGGTCTGCGGAGGAAGACAAACGTCTTCGAGCGTGCGTAGAAAAGTTCAAAATCGGTCATTACATTCCCTGGGGAACGGTAGGAAAATACATGAACGGTAGAAGCAAAATGCAGGTATATTTTCGTTGGAGATACAACGCGGCTCCTCACTTAAAAAAAGGAAGATTCACTCCCGAGGAAGACGCGATTTTGCTCGAGGCCGTGAAAAAATACAGCACAAATTTCGCCAAAATATCGACTTACGTTATGCCAACCAGATCGAGCGTTCAGCTGAGCGATCATTATATAACTCTCTCGCAGAGGGAACAAGGATTACGAAATTCCTGGACAATAAGCGACGACGTACGTGTCGTTAAATTGTACAGAAAATACGGCGCCGATTGGGCTAAAATAGCCGAAAAATTTCCGGGCAAAAATCGAACTCAGCTGCGACATCGACACAAAGCAATCATTCGATACTGGGAAAAAGGCGTTTCGCTTTATGAAATGCATCGATATCCTGAAGAACGAGTGGAATCATATATCGACGACGAAATTGAAGTGATTGAAAGTATGCGCCGGGCAAGAGCGACACTTATGCAAGCCAAATATTGCAAGGAAACTTATGAAGTCGATTTGGAGcttgttaaatattttcaattgatTCCACCCGCCGCTAAACCCGGAAGAAAACAAAAGTATTACAAGGATGAGGAGCTTGAGGATGTTACGAGAAAATTGTACGTTCTTCTTAAAACTCTAAACGTTGATCTCGAGATTCCTGATGAATTGGAGGATCGATCGCTGACAGAAAAAGACAAACAATTGCTGCTCTCTTATAAAGAATATCAGCAGAAGCAGATCGAATACGCTAATTTTCAACACGAAAATCTCAGATATTCAAGAATTTTTAACGACGAAACAGACGAAATGCAGGATATACATTTTAAGCCAATGTGTTCCGGAGATTGCAACAGAAATGAAAGGTTCAGACTGAACAATAGGATTGATTATCAATGTCCTCCGTTCCTCGATTGccaaataaaactcaatttgcAGCTCGAAACACCGACGATTGTCTTGGACTGTATTGGCAATGATTTGAACGAAGAATTTGATTTGccgatgaaaatattttgtggAGGAAAAACCGAAGTTTCCAAGCCAAACGCTGtgagaaaaatttatgttatcggACCTGAAGATTGCTCCAAAGTTTTTGGTGTTTCTACTGCGAATTTAATTCCAAAAATCGGAGATAAATCGAAGCAGAAAAATATCGAGATTAAGAAAAAGAGGCGCAGCATTAGAAAAGGACAAAACTGGGAATCATGCATTTCTGAAGGAATTatttatacacccgaaaaagCTGTTGCTTGCGTTGAACCGAATCATCATACGTTGCTTGGATTGCAACATATTCTTGATGGTCAGGACGAACGTTTGCCGAAATCTTCCGCTAAACAACCTGAGATGACTAGCGAAGAGAGTAAAAATTCGATGGAAACTTTGAAGAAGAGAATGTTTCAATTGTTCAAATATCCTATTGGCTTGTCGCATATTCTACGGCCGGAAATTTACGCGAAACAAGTTACGAAAATTGGAATTGTAGAGAGCGAAGACATCGAAGATGATTCTTGCAGAGTTTCGTCGCCTCCGCCTAAGAAAAAACGATTAGCGAATAAAAAAAGCGTGAAAACcgaataa
Protein Sequence
MSEPEDDRVLLDEIKALEDFLATDELSEPSDLPKNVPKRHNLNDAPRRANFQSRGFGEVTPYHEGENSVNNRGKDAQCHPESALEANRMLIELLTESKNELMSMLEKCIENKTIVEERIKERAKNARSQKILIGSAGMPYFKDEKQYVAPRNEDAQEKTRKGELSVVHLRYTSPWSARDRNILWRAIRHEASTAALKIEGETSNIASCSSGGTNGSTRFNLPKNFKAMVGPIGEREFDWMKIAAMDFDNRHTPEECKVMWQVFLHPDINRYRWKKEEDDGISTLSKKYKFQDWDSLAKELGTNRSGYQCFIRYNTNNQATFLKESAWSAEEDKRLRACVEKFKIGHYIPWGTVGKYMNGRSKMQVYFRWRYNAAPHLKKGRFTPEEDAILLEAVKKYSTNFAKISTYVMPTRSSVQLSDHYITLSQREQGLRNSWTISDDVRVVKLYRKYGADWAKIAEKFPGKNRTQLRHRHKAIIRYWEKGVSLYEMHRYPEERVESYIDDEIEVIESMRRARATLMQAKYCKETYEVDLELVKYFQLIPPAAKPGRKQKYYKDEELEDVTRKLYVLLKTLNVDLEIPDELEDRSLTEKDKQLLLSYKEYQQKQIEYANFQHENLRYSRIFNDETDEMQDIHFKPMCSGDCNRNERFRLNNRIDYQCPPFLDCQIKLNLQLETPTIVLDCIGNDLNEEFDLPMKIFCGGKTEVSKPNAVRKIYVIGPEDCSKVFGVSTANLIPKIGDKSKQKNIEIKKKRRSIRKGQNWESCISEGIIYTPEKAVACVEPNHHTLLGLQHILDGQDERLPKSSAKQPEMTSEESKNSMETLKKRMFQLFKYPIGLSHILRPEIYAKQVTKIGIVESEDIEDDSCRVSSPPPKKKRLANKKSVKTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-