Eman017834.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- clz9
- Assembly
- GCA_963970395.1
- Location
- OZ019972.1:6621781-6623292[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 2.3e-05 25.4 0.1 3 39 30 65 28 71 0.84
Sequence Information
- Coding Sequence
- ATGGgcggaatggaaaaaaattcaaaggggAAACGAGATGCCGAGAAAGACGAAAAgttcaaaagaaaatttttcaaatatcgtGAAGAAAGTGTTGGAAAAGCACTGAAGGCTGTACGAGATGGAATGGCGGTTGCCACGGCGAGCAAAATGTATGAAGTTCCTCGGACTACATTGCGTAATAAACTATCCGGAAGAGCACCGGAAACATCGGGACGAATTGGGCGAGAAGCTGTGCTTGGACACGATACTGAAGAGAGATTGGCACAGTGGCTCTTGCAGACGAGTAAAATGGGATTCCCTATAAATAAGGACTCGCTGTTGTATTCGGTGAAGAAGCTCCTAGAGACGGAACACCTGCCTAATCCCTTCAAAGACAACCTGCCTGGACGGAAATGGTTCGAAGCTTTCCTCCGACGCCATCCACaagtttcgcaaaaaaaagcggAGCGTCTCTGCAAAGCTCGAGCTATTCTTACCGAAGAACGTATTCGACTTTGGTTCGCGGATATAAAAAATCAGCTCGGGGAAAAAGTTGAAATACTTCAAGATCCTCGACGAGTGTTCAATATGGACGAAACAGCGGTTTACCTTTCGCCAAAGGGTGGTCTCGTGCTAGCGGAAAAAGACAAATCGGTGTACGACGTTGCTACTAACGACAAAGAAAATATCACGACGCTGTTCACTGTCAATGCTGCTGGAGAATTCGCGCCGCCGCTAACGGTCTTCAAATATACACGTCTCCCGAAAGCCTGTATCGAGGCGGCACCTCCAAATTGGAAAATCGGGAAAACTGAGAACGGCTGGATGACAACTGAATCCTTCTATGAATACTTCACCAATGTTTTTCATCCTTTTCTGGTTGAAAGTGATATTCCATTGCCCATCGTAGTATTCTTAGACAGTCATGTTTCCCACTTGTCTCTGCAGCTCAGTGTGTTCTGCAAGGAAAATCAGATCGAAATCGGCTGTTTTCCATCTCATGCAACCCATATTCTGCAGCCGCTGGATCTCGCTGTTTTCTTTCCGCTTAAACGAAAGTGGAAGACACTCGTAAGAAGTTGGCGAAACGAGCATGATGGGGGAGACCTCCAAAAACATCAAGTACCTCCATTATTGGCGCGCGTAATCAATGAACATGATTTTACTGACACCATAAAGAGTGGCTTCAAGACGTGCGGGTTGTACCCGTTTGATGATAATgcagtcaattacacaaaatgcATTCAGGAAAACAAAGAACAACCCGGCGATAACAACGTAGAAACGGAAAGGGTTCTATCGGAGCGACCTAATCTCACGCATCGCAATTATGTAGAAAGTAAAATCGATCCTGAATTACTGCGACAATTTGAGAAAAAGAAAGCCTTTAATAAGACTTGGGATGCTGACGACAGGAACGCTGCACTGTACGAATTCTGGTTGAAGGTAATCGGCGATGAaaagaaagagggagagagtgTGATCGTGAACCTCGAAGCACCTGACACCACTCGAAGGAATCTCTGTTGA
- Protein Sequence
- MGGMEKNSKGKRDAEKDEKFKRKFFKYREESVGKALKAVRDGMAVATASKMYEVPRTTLRNKLSGRAPETSGRIGREAVLGHDTEERLAQWLLQTSKMGFPINKDSLLYSVKKLLETEHLPNPFKDNLPGRKWFEAFLRRHPQVSQKKAERLCKARAILTEERIRLWFADIKNQLGEKVEILQDPRRVFNMDETAVYLSPKGGLVLAEKDKSVYDVATNDKENITTLFTVNAAGEFAPPLTVFKYTRLPKACIEAAPPNWKIGKTENGWMTTESFYEYFTNVFHPFLVESDIPLPIVVFLDSHVSHLSLQLSVFCKENQIEIGCFPSHATHILQPLDLAVFFPLKRKWKTLVRSWRNEHDGGDLQKHQVPPLLARVINEHDFTDTIKSGFKTCGLYPFDDNAVNYTKCIQENKEQPGDNNVETERVLSERPNLTHRNYVESKIDPELLRQFEKKKAFNKTWDADDRNAALYEFWLKVIGDEKKEGESVIVNLEAPDTTRRNLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00297472;
- 90% Identity
- -
- 80% Identity
- -