Eman019398.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- -
- Assembly
- GCA_963970395.1
- Location
- OZ019972.1:27168652-27170157[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-11 8.1e-08 33.3 0.0 4 36 22 54 19 58 0.93 2 2 5.1 8.5e+03 -2.0 0.0 25 35 316 326 315 327 0.84
Sequence Information
- Coding Sequence
- ATGGCGCCATCAGGAAAGAAAGGGCCTAAAAAAGCTTACGAAAGGTTTAAATATGAACGACACAATATGGAAGAGGCTGTGAAAGCTGTTCAGGGAGGCATGAAACTCAGCGCTGCAGCATCACAATACGGTGTACCTAAATCAACATTACATACAAAATGCACTGGCAAAGTTCCTGAACAGTGTAAGATGGGACCTAAATCGATACTCACAGAGGCAGAAGAGAATTGCATAGCAAAGTGGATCATAGACAAGGCCAAAGTTGGTTTTCCTATGCACCCAGATGAAGTAAAAGATGCTGTACAACGTATCATGGAAGAAGTTCCACGGGAAAATCCATTTATAGAAAATAGACCAGGCGAAAAATGGATgagcctatttttgaaaaggCATCCGGAAATTCGTAAAAAACATATTGATATTATCTCAAGGACTCGTGATGATTCCACTGCAGAAGGGCTGCATCGGTGGTTTGCTGAAGTAAGGGCTTTTTTGGAAGAGAACAATGCTCTTGATATTCTTGATAGACCTCAAAGTATTTTTAGTGGTGATGAAACATGTATACAAACGTGTCGTAAAAGCGGTTTCATATTAGAAGCAAGAAATGACAAGAATTCCTATGAAGTTTCAAAGGATAATGAAAAAGAGTGCATAACAGTTCACTGTACACTTTCTGCTATTGGCGAGACAATACCACCAATGATCGTATTTCCCTATAATAGGATTCCGGCACACATTGCACAATCAGTCCCGGACGGATGGCGAATTGGACGGTCAAAAAGTGGTTCCATGATTCATGCcacttttcatgaatttgtagtCAAAGTTTTTTATCCATGGTGTGTGGAAAATAAAGTACCATTTCCGGTGCTATATTTCGTTGACGGACATAAATATCACATCAGCTCGGAACTtcaagaattttgttttcagcACAAAATCATTCTCTACTCGTTGCCGCATAATTCCATTCATATGATGCAACCATGTGATTTAGCAATATTTAAACCGTTAAAGGCACATTGGAAAAAAGTAATTAACGAACACAAACTGCAAACGCAGAAACCAATTATGAAATTCCATTTTGCTCCGTTATTCAAAACAGCATTTGACCGACTACAAATAGAAGCGGAAACTATTCAGAAAGCATTTAAAACCTGCGGATTGTGTCCCTTTCATGAAGATGCACTTGATTACAGCAAGCGCAATTCCACCAAGAGAACTAAACCTTATCCGGAACCAGAAAGCCCATCCGTCGATACCGAAGACTATGCTTCCGCGAAGAAGGTCATCGAGCATCTTATTGGATCTGAACAGACTAAATTGTTTATGAACATGAGAAATGCAAATGAAGATGAAGATCCTGTCGATCCTGTATTTAGGTTGTGGAGAATTTGCGCCGATCATGCCGAAGGTATTCATATACTAAAGGACGTAGAAATTATTACCGACACTCCACATGAGGCTCAAGAAAACGATAAATCTGATGTTGGGTGTAATCCTTAA
- Protein Sequence
- MAPSGKKGPKKAYERFKYERHNMEEAVKAVQGGMKLSAAASQYGVPKSTLHTKCTGKVPEQCKMGPKSILTEAEENCIAKWIIDKAKVGFPMHPDEVKDAVQRIMEEVPRENPFIENRPGEKWMSLFLKRHPEIRKKHIDIISRTRDDSTAEGLHRWFAEVRAFLEENNALDILDRPQSIFSGDETCIQTCRKSGFILEARNDKNSYEVSKDNEKECITVHCTLSAIGETIPPMIVFPYNRIPAHIAQSVPDGWRIGRSKSGSMIHATFHEFVVKVFYPWCVENKVPFPVLYFVDGHKYHISSELQEFCFQHKIILYSLPHNSIHMMQPCDLAIFKPLKAHWKKVINEHKLQTQKPIMKFHFAPLFKTAFDRLQIEAETIQKAFKTCGLCPFHEDALDYSKRNSTKRTKPYPEPESPSVDTEDYASAKKVIEHLIGSEQTKLFMNMRNANEDEDPVDPVFRLWRICADHAEGIHILKDVEIITDTPHEAQENDKSDVGCNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -