Eman030071.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- bab1
- Assembly
- GCA_963970395.1
- Location
- OZ019976.1:11244519-11246268[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-13 6.5e-10 40.0 0.0 1 45 375 419 375 419 0.95
Sequence Information
- Coding Sequence
- ATGTCGGGCATGGGGGCTGCCGGAGAACAGCAGTTCTGTCTTAGATGGAACAACCATCAAGCGAACTTCATAGAGGTCTTCGAGGCCCTGTTGGAAGAGGAAACGTTCGCAGACGTGACCTTGGCTGTCGATGGTGTGATTATAAAATGTCACAAGATGGTATTGGCCGCGTGCTCGGCTTACTTCACGAAGCTCTTCTGCGATGTCCCGTGTTCGCATCCCGTTGTCTTCCTCAAGGACGTAAAAGTCAGCGAGGTCAAATCCATACTGGAATACGTTTACAAGGGCGAAGTGAACGTAGCCCGGAACGATTTGGCGCCCATGTTGAAGGTCGCGGAGATGCTGCAGATAAAGGGTCTCATGAACACCGGTTCGCAACTTCCGCCGGTTGAACGTCATTCATCAGAAAGGCACAACAAAGAGAGACCGAACGAGGAAGCCATAAGCACAAGTACGACCAGCAGTCATGGCACCCTCGCTCCGGAACACGGCGTTGGTGCTCCTGGAGGTGGTGGACATTCGTCACCTCCTCATTCCACAAGTTCGCCGTACTATGGATATGGAAAGTCGCCGAATACTCGTGAAAACCGGGCAAGATTTCCACTTCCTGTTTGGGCGCTCGCACAAGGACTTCCGCTGGTCGGTCAGAATCCAACGGTTGTTTCCGCAGCTCTTCATCCCTCTTTGGCTGGCAGACACTCATCCATATACGGAAACTTTTATGAAAATCCCACCAAAGCCTCCACTGCGCataacaaccgcaaaaacaaGATATCGGTCGGCAGTATGATGCGAAATCACGATACGCCGATACTCCGAGGGGTTCTTGGTCAAGTTCACGCCGATAGTTCCCAAGCTGCTCAACATATTCTCACCGACGTACACGAATTGCATTATCGAAGTCACAGCAACGGATCCGCTGACAATGGCTCTGACGGCAGACGCAGCAGTATGGATCTCTCCAATGGGCATCTCGCTCACAGTTCATACGCTACTGGCGCTTCCATGATGGATGAGGTCGAGAAGAAACCCTCGCGTCGATCATTATCTGACGATAAAAAAGCAGCTATCGCCAACTACGTGTCATCACAGAAACCCGAATGGAAGCGTTACAAGCAGTACACAAGAGCTGATATAACGGACGCTATTGACGCTGTAAGGGGCGGCTTGAGCGCACTTCAAGCAGCCCGAAAATTCGGAGTACCATCGAGGACTCTGTACGACAAGGTGAAGAAACTAGGAATAACGTCATCGAGATCTGGCAGACGCTCGACCAACGGCAGCGGTGTCTGCTTTGCCTATGACGTCGGCAGCAATGTAAACGGCAGTATTTATGGCAATATTTCGGAAAATGATCAGGATAACGGCAGTGGCATGGTAGAAAATCCGTCTGCGGTATTGGCCTCGTGTGCGGAGAGTCGCGACAATTCAGTGGATCGTGAAACTATGATGGATCAAACAAGAAGTCCCAGCCCTCCGCTTGCCCTTTGCTATCAGCCACCGCCTCACCAACAGGAAAAGCAGCAGGAGGAACGGGATCAGGAGAGCGATAATGAGGTTGAGGATCTCTCGGTACCTCGTAGACCCGATGTGCGCGTTATTATGCCACCGAGCGTTACGATCAAAGAGGAAGCAtag
- Protein Sequence
- MSGMGAAGEQQFCLRWNNHQANFIEVFEALLEEETFADVTLAVDGVIIKCHKMVLAACSAYFTKLFCDVPCSHPVVFLKDVKVSEVKSILEYVYKGEVNVARNDLAPMLKVAEMLQIKGLMNTGSQLPPVERHSSERHNKERPNEEAISTSTTSSHGTLAPEHGVGAPGGGGHSSPPHSTSSPYYGYGKSPNTRENRARFPLPVWALAQGLPLVGQNPTVVSAALHPSLAGRHSSIYGNFYENPTKASTAHNNRKNKISVGSMMRNHDTPILRGVLGQVHADSSQAAQHILTDVHELHYRSHSNGSADNGSDGRRSSMDLSNGHLAHSSYATGASMMDEVEKKPSRRSLSDDKKAAIANYVSSQKPEWKRYKQYTRADITDAIDAVRGGLSALQAARKFGVPSRTLYDKVKKLGITSSRSGRRSTNGSGVCFAYDVGSNVNGSIYGNISENDQDNGSGMVENPSAVLASCAESRDNSVDRETMMDQTRSPSPPLALCYQPPPHQQEKQQEERDQESDNEVEDLSVPRRPDVRVIMPPSVTIKEEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497318;
- 90% Identity
- iTF_00652950;
- 80% Identity
- iTF_00652950;