Basic Information

Gene Symbol
-
Assembly
GCA_018467065.1
Location
CM031572.1:8142699-8157642[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.012 58 4.9 0.5 11 31 130 150 122 152 0.78
2 17 0.03 1.5e+02 3.6 0.1 12 27 160 175 158 183 0.86
3 17 0.067 3.3e+02 2.5 0.1 12 31 266 285 260 287 0.79
4 17 0.013 65 4.8 0.1 12 31 304 323 297 325 0.83
5 17 0.013 65 4.8 0.1 12 31 357 376 350 378 0.83
6 17 0.013 65 4.8 0.1 12 31 395 414 388 416 0.83
7 17 0.013 65 4.8 0.1 12 31 433 452 426 454 0.83
8 17 0.013 65 4.8 0.1 12 31 471 490 464 492 0.83
9 17 0.013 65 4.8 0.1 12 31 547 566 540 568 0.83
10 17 0.014 68 4.7 0.1 12 31 597 616 591 618 0.83
11 17 0.0043 21 6.3 0.2 12 35 635 658 628 659 0.84
12 17 0.013 65 4.8 0.1 12 31 688 707 681 709 0.83
13 17 0.013 65 4.8 0.1 12 31 726 745 719 747 0.83
14 17 0.013 65 4.8 0.1 12 31 779 798 772 800 0.83
15 17 0.013 65 4.8 0.1 12 31 817 836 810 838 0.83
16 17 0.013 65 4.8 0.1 12 31 855 874 848 876 0.83
17 17 0.011 56 5.0 0.1 12 31 893 912 886 916 0.83

Sequence Information

Coding Sequence
ATGGAAAGGAGTATGATATGCAAGAGGGTGACTGACAAAATAAGAACAGACACAATACGGGAAAGTACAAAGACAAAAGAGATCACACTAGCAATTAAGAAACTAAAGTGGAGATGGGCAGGTCACACAGTTAGAAGCAAAGATAAATGGTCAAGAACGTACAATGATCAGCTATCGGCCCTGCGTAGCGACCTGCGCACTTGCAAGCGCAAGACGGCGCTGCAACAGAAACAGATTGCGGAACAACAGAAGCAGATTGCCGAGCAGCAGAAGCAAACGTTAGAATATGCTAACCGCCTTGACGATTATGACAAGAAGAATGAAGAGACTAGCCGCAAATTTCAGACACTTCTGCAGGAGCTGAATAAGTGCAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGGCGGCTCGAGCCCAACGAGTTGGCGCAGGTAATGATGAGGAGTCACACAAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGTAATGATGAGAGTCACACAAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCTGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGTAATGATGAGAGTCCACACAAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGcagagcgtagttgctctgcacaccgaGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGTAATGATGAGAGTCACACAAACTGCTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGTAATGATGAGAGTCAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTACCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCAGAGCCCAACGAGTTGGCGCAGGTAATGATGAGAGTCACACAAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACAGAGTTGGCGCAGGTAATGATGAGAGTCACACAAACTGTGTGATATGGTTGTCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCCAACGAGTTGGCGCAGGAGCTGAACAACAAGACGGAGCTGCAGTACTGGCGCTCGCGCTCGCCCGCCGTGCCGCCGCTGTGCGCCGAGTGCGGCGCCGAGCTGCGGCTCGAGCCAACGAGTTGGCGCAGGTAA
Protein Sequence
MERSMICKRVTDKIRTDTIRESTKTKEITLAIKKLKWRWAGHTVRSKDKWSRTYNDQLSALRSDLRTCKRKTALQQKQIAEQQKQIAEQQKQTLEYANRLDDYDKKNEETSRKFQTLLQELNKCKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQYWRSRSPAVPPLCAECGAELAARAQRVGAGNDEESHKLCDMVVAGAEQQDGAAVLALALARRAAAVRRVRRRAAARAQRVGAGNDESHTNCVIWLSQELNNKTELQYWRSRSPAVLPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQVMMRVHTNCVIWLSQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQQSVVALHTECGAELRLEPNELAQVMMRVTQTAVIWLSQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQVMMRVNCVIWLSQELNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLRAQRVGAGNDESHTNCVIWLSQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNRVGAGNDESHTNCVIWLSQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPNELAQELNNKTELQYWRSRSPAVPPLCAECGAELRLEPTSWRR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-