Basic Information

Insect: Ephestia elutella
Gene Symbol: -
Assembly: GCA_018467065.1
Location: JAEMBS010000155.1:15674-23326[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.018 2.2 10.4 2.9 1 23 83 106 83 106 0.98

2 18 6.8 8.4e+02 2.3 4.1 1 23 181 203 181 203 0.96

3 18 0.004 0.49 12.5 0.7 2 23 209 230 208 230 0.97

4 18 0.27 34 6.7 3.4 2 22 498 518 497 518 0.95

5 18 4.6 5.6e+02 2.8 1.0 1 23 616 638 616 638 0.82

6 18 0.79 97 5.2 0.3 2 23 773 794 772 794 0.96

7 18 0.45 56 6.0 0.7 2 23 867 888 866 888 0.96

8 18 0.046 5.7 9.1 0.5 1 23 896 918 896 918 0.97

9 18 0.16 20 7.4 3.4 1 23 954 976 954 976 0.95

10 18 3.4e-05 0.0042 19.0 2.0 1 23 985 1007 985 1007 0.99

11 18 0.07 8.6 8.6 1.6 1 23 1090 1112 1090 1112 0.99

12 18 6.8 8.3e+02 2.3 0.8 1 19 1168 1186 1168 1190 0.90

13 18 0.052 6.4 9.0 0.4 1 23 1285 1307 1285 1307 0.92

14 18 0.0098 1.2 11.2 1.0 1 23 1313 1335 1313 1335 0.95

15 18 0.0089 1.1 11.4 2.6 1 23 1425 1447 1425 1447 0.97

16 18 0.00022 0.027 16.4 1.4 1 23 1453 1475 1453 1475 0.99

17 18 0.41 51 6.1 2.1 1 23 1566 1588 1566 1588 0.96

18 18 0.0037 0.46 12.6 3.7 1 23 1599 1621 1599 1621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.018	2.2	10.4	2.9	1	23	83	106	83	106	0.98
2	18	6.8	8.4e+02	2.3	4.1	1	23	181	203	181	203	0.96
3	18	0.004	0.49	12.5	0.7	2	23	209	230	208	230	0.97
4	18	0.27	34	6.7	3.4	2	22	498	518	497	518	0.95
5	18	4.6	5.6e+02	2.8	1.0	1	23	616	638	616	638	0.82
6	18	0.79	97	5.2	0.3	2	23	773	794	772	794	0.96
7	18	0.45	56	6.0	0.7	2	23	867	888	866	888	0.96
8	18	0.046	5.7	9.1	0.5	1	23	896	918	896	918	0.97
9	18	0.16	20	7.4	3.4	1	23	954	976	954	976	0.95
10	18	3.4e-05	0.0042	19.0	2.0	1	23	985	1007	985	1007	0.99
11	18	0.07	8.6	8.6	1.6	1	23	1090	1112	1090	1112	0.99
12	18	6.8	8.3e+02	2.3	0.8	1	19	1168	1186	1168	1190	0.90
13	18	0.052	6.4	9.0	0.4	1	23	1285	1307	1285	1307	0.92
14	18	0.0098	1.2	11.2	1.0	1	23	1313	1335	1313	1335	0.95
15	18	0.0089	1.1	11.4	2.6	1	23	1425	1447	1425	1447	0.97
16	18	0.00022	0.027	16.4	1.4	1	23	1453	1475	1453	1475	0.99
17	18	0.41	51	6.1	2.1	1	23	1566	1588	1566	1588	0.96
18	18	0.0037	0.46	12.6	3.7	1	23	1599	1621	1599	1621	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCAGCCGAGCTCACAAGTCGGCGAGGTCGCGTCTATCGTTCGCCCCCTTGAAGGTCGCTCGTATGGCGACGCCTCTTCGGATGCCTCCTCCGACGCTGCCGAAGAGGAGTTACCGCAGTGCAAAATAAGACGTAACTACAACTGCGCAAAGTGCAAGTTTTACACACAAAATCCGCGAGTTTTTCTTTTACATGTTCGTGAAGTGCATtttgaaagatttaaaatataCGTTTGCCCGTATTGTGTTTACGCCTCTAGACATCATCAAAAACTTTTGAGACATTTAAAAATGGTGCACGACAACCGCGGTTCGGCTATGAAGTTGGAACCTGAGCTGCCTCCTGCCATTCCGAACAATGAAGAGCGCATGGAAGATCTCTTGGAAGAAGTGGAGGAGTGTGACGATGGAGATATGGACACAGAAGATGGACAAGCCGATTCTATGTACCGCTCCACAGATGTCGAAATGGACGTCAGTAAATCAACAGCTGATGGACCGTCAAAGaacaagggagattattttaattgtgataaatgCAACTACGTGACCCATATCAAGGCCAGATTCACAAAGCATGTCAAATACCATTCGATACCTAGGATCAAATGTAGTATTTGCGAATTCCGCACACCATACAAATGGAATCTGGACCGGCACATGAAGAATCACGGCGGCACCGGCAGTTTCAACTGCTGCATGTGCAACTTCACGGCGGACATAAAGCAAAGTCTGACGGCGCACGAAATGAATCACCACAGTCGTCCGCTGGACCAGTCGGCGGGGAGACGCGGCCGCAACCGTGTGGGTGCCAGCGACGTGTCGGCCAGCGCGGTGTCAGTCGTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGTTCCTCGCACTCGGAAATGATGGGTATGCAGTACATAGAGAGGGATACGATAAGTTGCAACAGCGACTCGAATGACGCGTCGACGTCCGAGGTGGCTGCCAAGAAGGATAACTCGCAGTTGGCACAAGACGCGCAACATTCGCCTAATGCTTCAATGGACGACGCCAAGAGTCAAAAACAGAACAGAAAGATACCCAGGCCGATACCTCAGCTAATACCACTAAATGCTTCCACTCCGAACCAGGCTAAATCGTCCGGAGAACCACCCTCAaagaaatttaaagaaaatccCTCTAACGAGTCTAATGACTCTAACTCCGACAGTAAACTTGATGTGCTTCCGGCTGATATTACTTTAATTCCAGTATCTAATACATCTGCCAAGGAAACTGTTGTCCGAAAGAAAAATGAATCTTTCTTTGATAAATTGAAAGAAAGGATATTGACTGAAACTGGAGAGGAAGGTTCACTTAACTGTAAAAATTGTGGATTTGTAAGCAAATGTCTCTCTGAACATTCGgtacatgaaaaaaattgtaCCGTCCAATCCAATCGCGCCGCTGTCAATACATTGCTACCAAATTCAAGTTCAACGCGATGCCAAAATTGTAGACACAGATGCAAATCTAGTGCAGACCTGTATATCCATATGCAGACATGTAGAAAGAATGAAAAGCATGGCGATCAGTCGATGGAATTAAAAAATCAAGAGAGCAATGATACTTCCTCTTCCAACCAAGATCGAGATGCAGAGCCGCATCCTAtggaaaatgttgtttttgtaTGGAATAATATAAATCACGATTCAAATAATTTCGAAACTCCGCTTGGAATAAATATTAACGATGATTCTACCCTTCCAATGTTACACAAAACGTTGGACAGTGATATCGTGGATGACAATGAAAGTATGAATCTTTCGCCGAGTCAGGCTGTTGGAAAAAGAGTTTTTAAATGCCCTCATTGCCCGTTCTGGGCTTCGACAGCGTCAAGATTCCACGTCCATATTGTTGGCCACTTAAATAAAAAACCATTTGAATGTTCACTCTGCAAATACAAGTCAAATTGGCGTTGGGATATTACAAAGCATATTAAACTTAAGTCTGCCAGAGATCCAGAACACAACGAAGCAAAAGTTCTAATGACTGATGAAACAGGCAGGAGGAACTATACAAAATATAGCAAGTTTCTAGCAATGTCAGTTTTGAATGAATACGGTGAAAATGAATTTCACTACATCGATCAAAATGCTTCAGCTGATCCGTCTATAGATGGTCATGACTCACTCAATGATATAAATGACATGAATGCGTCGTACGAAATGCAGCCGCTTAACTTGCAAACTCAGCATTATCAGCAAAAATATGACTTTATGGATGGCAGAATCGTTGATGCGAAGAAACCTAAGAAAACACTGTGGAAgtgcaaaaaatgcaattacaAAGATCCATCAAAAGAAGCATTATTAGAGCACGTTCGGGAGCATGCCAAGGCAGAAAGTGTTaataaccaaaataaaaaactggAAAATCTACCAGATCCAGCGGATTTAGCATATCGTTGTGGCCATTGCAATCAACTGTCCAATTGGAAGCATGTTATACAGAGGCACTGTCGTTTGAAGCACGATGGAATCATCAAGGTGATCACTACAATAAAACCAAAGCCAGAAACATCTTCTACAGCTGAAGTCACTGGAGATACTTGCACAAAATGTCCATTTAGATCCGCAAACAGAAAAGTTCTAATAATGCATCTAAAGCAACACCAGCCTTCAGATGATTCTATCTTCAAATGTTATTTCTGCCCGTATTTTGTCAAAGATGAACAAGAATTAATCCAACATCTACTGCTGCATGGAATAACAGAACCAGAGGAATATATTGCCAAAGCTATGGGAAGTAGGTCACCGTTACCAGACCCTGTCCTCTTACCAAGCACATCGGGGACATCCAACAAGCGACACAAGTGCACAGAATGCCCCTACGAAACAAATAGTAAATCACAGTACATGTATCATGAACAGTTTCACCGTGCTCCAAATGAAACCCGAGAATACAAATGCCCGGAATGTAATTACAGCGTGTCTAAAAGGCATTTACTAAATCAGCATTTAAGAGTACATGGAATTATTACGAAGAAATCTGAGTCTGAAGCGGAATTAGAAGCGATGGTATCCGAGCCTAACAAAACTGAAAAGTCACAAGATGATTTTACGCTGTTGGAAGAGATCCCTTATGTGTGGGTATCAGCCAAAAATGAATTCCACAAAATGTACAAGTGTCGGTTTTGTTCATATGTAAATTCACAGAAATGCAAAATACCCAATCACGAAAAAATCCATTGCATTGAAAATAGTGAAATTACTGTGTATAAATGTTGGGAGTGTAAATTCACGTGTGACAACGCAGGAAGATTAGCCGAACATTCCAAAACACATGGCGAAATTTACGGTCGAATCTACTGTCCAGTTGAACCTGAAGTTCCTGATGAAGAACAAATTGCCAAATTACGTAAAGTCATAGAAACCGAGAAAACAAGTGCGCCGGATGAATTACAAAAGGAAGATGTGATCTCCACTGAAAGCAAAGAAATAAAGACATTATACTTCTGCCAAAAATGTCCGTCGAGATTCTTTGCGGAAGAAGATTTAAGAGTTCACGATAATAATCATAATGACAACACTACTAACAAATGTAAAAGTTGTGACTTTTCGGCGCCCGATGAAGAAGAGTCAGAGATTCATTTGACTGTTCACTCGGACGAGTATCACACCAAAACTAAAATGTTGAAGTTTATACATAATATGCATCCAGCTCATACACAACCTCGACTAGAGCTCGTACATTGTCCGACTACGTCTGATATTACTTGGATCGTTACAACGTCAAACAAAAACTTTGACCACGAGCCTAGTATTAGAAAATCATGCGATAGCAAACATCCATCCAAACAATATCTTTGTAAAGAATGTCCAGCAAAATTCTTCAAAAGCTCGGCTCTCAGCTACCACTTGGGCCTACATGGCAGTGATGGAGAGCACAGGtgcaaaaaatgtaattatgcTGTTAAAAACATAGGAAACTTAGCGAAACACGAATTGCTCCATGATACTGCAGAGAATAAGCAATCTGGCGAATACGATTCCGGTGATGATAtggattataaaaatattcctttgTCTGGAACGGATTTGTTTCAAAGAAAAACTGAAGCTCAAAAACGTGTTTTGACTGATAAAGATAAACTTGTAAAGCCTAATGACCATTTCCCACCAGTACTACAGGCGGATCCACAATTTGGCTACCTTATGCATGGTAATCCTGAATTTATATATCCTACGTATTTAAAGAACGGAAGGCAAAAAGAAAAGCGTTACAAGTGTCACAAATGCCCTTCAGCTTTTGAAAAAAGAGAGCAGTATAAGATACACTTATCATTACATGGATCCAAGCAGAGATATAAATGTGAATTGTGTGACTACTCTGTAAAGTATTACGCAAACTACGTCCAACATATGAGAAAACATCAAATGAATGACGAGGCGCAAGCTGAAAGAAAGAAAGGCATCAGTGGTTTTACAGAAACAGGGATCCAAGAAACTAAACAAGACGAGAGTGGTGATAATATAAAACTAGCAATTAAAACAATGCCGAGGATAACAGCTAAAAGCGACTTTCAGCAGTTCTCGATAAGCGATCAACAAACTCTTCGCCTGCTTCAAAGAAGACGTTCTATAAATAGTTCTGGAAAGGATCCAAATGCAAATGAAACTTCACCGCCGTCGAACCGAAAATTGCACATGTGCCTATTATGTCCGTACACGAACCAACGACAGGATGCGCTTACAAACCATTACAGGAGACACGACGACACTGACGTGCTCAATGCAGGAACACACAAATGTTCTTACTGCGACTTGGTGGTGGTTCAATCACACTTCCTACGAGAACATCTTAAAACTCATTTTAGTTATCAGAAAACAATAACTCCGGACGGTTATGCCGCCAACAAAGATGTCAGTTTTACAATAACTCAAATAGATGACGATAACTTGTCTTCTGATCTCAAGTTAGATATACGTAATAAGATCTACCCATGCAGTAAAGATGAGAAAATATATGTCAAGATAAGTAGTGGGGAACTTATGGTGGAGTAA
Protein Sequence: MLQQMSSQPSSQVGEVASIVRPLEGRSYGDASSDASSDAAEEELPQCKIRRNYNCAKCKFYTQNPRVFLLHVREVHFERFKIYVCPYCVYASRHHQKLLRHLKMVHDNRGSAMKLEPELPPAIPNNEERMEDLLEEVEECDDGDMDTEDGQADSMYRSTDVEMDVSKSTADGPSKNKGDYFNCDKCNYVTHIKARFTKHVKYHSIPRIKCSICEFRTPYKWNLDRHMKNHGGTGSFNCCMCNFTADIKQSLTAHEMNHHSRPLDQSAGRRGRNRVGASDVSASAVSVVPKEEEGSGDSRSSHSEMMGMQYIERDTISCNSDSNDASTSEVAAKKDNSQLAQDAQHSPNASMDDAKSQKQNRKIPRPIPQLIPLNASTPNQAKSSGEPPSKKFKENPSNESNDSNSDSKLDVLPADITLIPVSNTSAKETVVRKKNESFFDKLKERILTETGEEGSLNCKNCGFVSKCLSEHSVHEKNCTVQSNRAAVNTLLPNSSSTRCQNCRHRCKSSADLYIHMQTCRKNEKHGDQSMELKNQESNDTSSSNQDRDAEPHPMENVVFVWNNINHDSNNFETPLGININDDSTLPMLHKTLDSDIVDDNESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYTKYSKFLAMSVLNEYGENEFHYIDQNASADPSIDGHDSLNDINDMNASYEMQPLNLQTQHYQQKYDFMDGRIVDAKKPKKTLWKCKKCNYKDPSKEALLEHVREHAKAESVNNQNKKLENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTIKPKPETSSTAEVTGDTCTKCPFRSANRKVLIMHLKQHQPSDDSIFKCYFCPYFVKDEQELIQHLLLHGITEPEEYIAKAMGSRSPLPDPVLLPSTSGTSNKRHKCTECPYETNSKSQYMYHEQFHRAPNETREYKCPECNYSVSKRHLLNQHLRVHGIITKKSESEAELEAMVSEPNKTEKSQDDFTLLEEIPYVWVSAKNEFHKMYKCRFCSYVNSQKCKIPNHEKIHCIENSEITVYKCWECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEPEVPDEEQIAKLRKVIETEKTSAPDELQKEDVISTESKEIKTLYFCQKCPSRFFAEEDLRVHDNNHNDNTTNKCKSCDFSAPDEEESEIHLTVHSDEYHTKTKMLKFIHNMHPAHTQPRLELVHCPTTSDITWIVTTSNKNFDHEPSIRKSCDSKHPSKQYLCKECPAKFFKSSALSYHLGLHGSDGEHRCKKCNYAVKNIGNLAKHELLHDTAENKQSGEYDSGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGISGFTETGIQETKQDESGDNIKLAIKTMPRITAKSDFQQFSISDQQTLRLLQRRRSINSSGKDPNANETSPPSNRKLHMCLLCPYTNQRQDALTNHYRRHDDTDVLNAGTHKCSYCDLVVVQSHFLREHLKTHFSYQKTITPDGYAANKDVSFTITQIDDDNLSSDLKLDIRNKIYPCSKDEKIYVKISSGELMVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00073360; iTF_01221109;
90% Identity: iTF_01221109;
80% Identity: -