Eelu015295.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031574.1:5697474-5723904[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.29 35 6.6 0.2 1 23 266 289 266 289 0.93 2 34 5.5 6.8e+02 2.6 0.2 1 11 384 394 384 398 0.89 3 34 5.5 6.8e+02 2.6 0.2 1 11 420 430 420 434 0.89 4 34 5.5 6.8e+02 2.6 0.2 1 11 456 466 456 470 0.89 5 34 5.5 6.8e+02 2.6 0.2 1 11 492 502 492 506 0.89 6 34 5.5 6.8e+02 2.6 0.2 1 11 528 538 528 542 0.89 7 34 5.5 6.8e+02 2.6 0.2 1 11 564 574 564 578 0.89 8 34 5.5 6.8e+02 2.6 0.2 1 11 600 610 600 614 0.89 9 34 5.5 6.8e+02 2.6 0.2 1 11 636 646 636 650 0.89 10 34 5.5 6.8e+02 2.6 0.2 1 11 672 682 672 686 0.89 11 34 5.5 6.8e+02 2.6 0.2 1 11 708 718 708 722 0.89 12 34 5.5 6.8e+02 2.6 0.2 1 11 744 754 744 758 0.89 13 34 5.5 6.8e+02 2.6 0.2 1 11 780 790 780 794 0.89 14 34 5.5 6.8e+02 2.6 0.2 1 11 816 826 816 830 0.89 15 34 5.5 6.8e+02 2.6 0.2 1 11 852 862 852 866 0.89 16 34 1.7 2.1e+02 4.2 0.5 1 12 888 899 888 903 0.92 17 34 5.5 6.8e+02 2.6 0.2 1 11 928 938 928 942 0.89 18 34 5.5 6.8e+02 2.6 0.2 1 11 964 974 964 978 0.89 19 34 5.5 6.8e+02 2.6 0.2 1 11 1000 1010 1000 1014 0.89 20 34 5.5 6.8e+02 2.6 0.2 1 11 1036 1046 1036 1050 0.89 21 34 5.5 6.8e+02 2.6 0.2 1 11 1072 1082 1072 1086 0.89 22 34 5.5 6.8e+02 2.6 0.2 1 11 1108 1118 1108 1122 0.89 23 34 5.5 6.8e+02 2.6 0.2 1 11 1144 1154 1144 1158 0.89 24 34 5.5 6.8e+02 2.6 0.2 1 11 1180 1190 1180 1194 0.89 25 34 5.5 6.8e+02 2.6 0.2 1 11 1216 1226 1216 1230 0.89 26 34 5.5 6.8e+02 2.6 0.2 1 11 1252 1262 1252 1266 0.89 27 34 0.01 1.2 11.2 1.3 1 23 1288 1311 1288 1311 0.96 28 34 9.6e-05 0.012 17.6 3.1 2 23 1316 1337 1315 1337 0.97 29 34 0.24 29 6.9 1.0 2 23 1345 1365 1345 1365 0.96 30 34 0.00054 0.067 15.2 0.8 1 21 1371 1391 1371 1396 0.94 31 34 0.0032 0.4 12.8 0.3 1 23 1404 1427 1404 1427 0.94 32 34 0.00042 0.052 15.5 0.1 1 23 1433 1456 1433 1456 0.97 33 34 7.5e-06 0.00093 21.0 0.7 1 23 1466 1488 1466 1488 0.94 34 34 0.00019 0.023 16.7 1.1 2 23 1495 1517 1494 1517 0.96
Sequence Information
- Coding Sequence
- ATGGAACAAGACGTGGATAATGATTACAAAACTGTGTGTAGTGCGTGTCTTAGCAGCGATCGAGATTTGTATTCACTTAGCAACTTCCAGCAGGTTTACCAAATATTCCGCTTAATTATGTACGATTTCGCGGGCGACCGGCTCGGCGATGCCCTGGTTGACATAGAGCACCTGATCTGCTGGGAGTGCCTGGCTATCATGAAGAGGCTGGCTCGCTTCAAACGGCAAGTCCACAGCGCTCAGGAGCATCTGAGAGTGCTGGCCATGAGCCGCTCGCAAGAGAGTATGGACCACACCTACATGTCTCAGTCGCTATCCTCGCTCGAGTTGACAACAAAAGTGGAGTACGACAAGATCTATGTAGACTATTACTCTCAGGAATGGCCGGAGCAGTTTAGCCTGTCCATAACCACTGCTGAGGAGGTCAAGAGAGAAAACTATGATGTCGCTCAGGTGGTCAGAGACAATATCCATTTGGATATAGATGACCATATGTTGGAAGTGCCAGAAATAGTGCTGGAGAATCCTGTAACGGGTGTGATGTCTCACATAGTGGTGGAGACTGACGCACTGGTCTCTCGCAGCAGCTGCGTACAGTCCGACAGCTTGCTCACTGCTCAGCCGCTGTCGACGCCAGAAATAGGCACGATGATAACAGTACTCCCCAAAATGACGACCACGGTTAAACAGGAGACGGTCAGCAGAGGCGGGTACACCACGGAGTATCTCTCGCAGGAGGAGATGTTGGCTTCCAGAGAGGAGGCCCGTCAGAAAGTGACATACGCCAGTTCTGTGTACAAGTGTGAGCTGTGCGTAGTCGGGTTTTACACGCAACAGCAGGTCAAAGACCATTTCATGGCCGCGCACAGAGCGAAACCAGGTAAATCCGCATGCAAGATATGCTACGTATACATGGAGGATTCCGAGCTGCCTGCCCACTCGGACTCGCATTATGTGCGACACACGTGCAGCGCGTGCGGCCACCGCGAGCACAGTGCGAGGCTCATGCAGCTGCACGTGGACAGCCACGCTAAGATGAGGGATGCTGTGCTCCAGGGGAAGAGCCGCAAGAAGAAGTCAGAGAAACAGAAGCCGCCGCCGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAAAACATTCACAGTTTGGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAATTTGAGCCGCAAGAACACAGAGAAACAGAAGCCCGGGGACCTTCGCAAGCTGCTGTCTAAGACCACCATCGAGGGCTACCAGTGTCTGGAGTGCGATATGTTCTTCAAGAACTCGCGAGCTCGTAAGAACCACGTGGCCCGCTACCACAGAGAGGGGCTACAGTGCGACCACTGCAAGAAGCGATTCGTGAACAGAACCACGCTGGCCACGCATTTGAGACTCCACGAAGGCCCATTGCCCAGGGAGGAATGCCCCATATGCCACAAGATGGTGCGCTCCATACAAATCAAGTACCACATACAGCGGCACCAGAACAAGTCGCGATACGAGTGTGGAGAGTGCAGCAAGGTGTTTTCACATCTCGCTACATACCAGGCACATCTCAAATACAGTAGAGCGCATGCGAGCGACCAAGTGTTCAAGTTCCCGTGTCCGATGTGCAACAAGGGGTATCCGACCAAAGAGGCGATGCAGGACCACTTCAACTACCAACATTTAGGGAAAACGTCGCATAAATGTCCCGTATGCGATAAGCCTATTGCGTCCCGAGCTAACGTGGAGAAGCACATAATGCGAGTGCACGGTGAGAAGAAGGATAAGCCGAGGAACCACGTCTGCAACGTCTGCGGGAAAAGCTTCACGgacaAGAAAGCTTTGACCCAACACGAAGTGATCCACTCAGGCGAGCGCCCCCTGGTGTGCGAACTGTGTAATCAAACCTTCAAGCAAAAAGCATCCTTATATACACATAGGAAGAGAGTCCATAAGGTGTTCCCTGCTAAGAGAGTTGTTGAGTTTATGGATACTAAGGGGGAAAGTTAG
- Protein Sequence
- MEQDVDNDYKTVCSACLSSDRDLYSLSNFQQVYQIFRLIMYDFAGDRLGDALVDIEHLICWECLAIMKRLARFKRQVHSAQEHLRVLAMSRSQESMDHTYMSQSLSSLELTTKVEYDKIYVDYYSQEWPEQFSLSITTAEEVKRENYDVAQVVRDNIHLDIDDHMLEVPEIVLENPVTGVMSHIVVETDALVSRSSCVQSDSLLTAQPLSTPEIGTMITVLPKMTTTVKQETVSRGGYTTEYLSQEEMLASREEARQKVTYASSVYKCELCVVGFYTQQQVKDHFMAAHRAKPGKSACKICYVYMEDSELPAHSDSHYVRHTCSACGHREHSARLMQLHVDSHAKMRDAVLQGKSRKKKSEKQKPPPKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFKTFTVWSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFNLSRKNTEKQKPGDLRKLLSKTTIEGYQCLECDMFFKNSRARKNHVARYHREGLQCDHCKKRFVNRTTLATHLRLHEGPLPREECPICHKMVRSIQIKYHIQRHQNKSRYECGECSKVFSHLATYQAHLKYSRAHASDQVFKFPCPMCNKGYPTKEAMQDHFNYQHLGKTSHKCPVCDKPIASRANVEKHIMRVHGEKKDKPRNHVCNVCGKSFTDKKALTQHEVIHSGERPLVCELCNQTFKQKASLYTHRKRVHKVFPAKRVVEFMDTKGES*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -