Basic Information

Insect: Ephestia elutella
Gene Symbol: Bcl11a
Assembly: GCA_018467065.1
Location: CM031579.1:7047192-7055592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0054 0.66 12.1 1.8 2 23 80 101 79 101 0.96

2 12 0.012 1.5 11.0 0.7 3 23 109 130 107 130 0.94

3 12 1.8 2.3e+02 4.1 0.2 2 21 138 157 137 160 0.81

4 12 0.0053 0.66 12.1 3.7 1 21 166 186 166 189 0.90

5 12 9.3e-06 0.0011 20.7 1.2 3 23 197 217 196 217 0.99

6 12 0.008 0.99 11.5 0.4 1 20 223 242 223 244 0.94

7 12 0.013 1.6 10.8 1.5 3 19 264 280 263 285 0.92

8 12 0.0045 0.55 12.3 2.4 1 23 601 623 601 623 0.98

9 12 0.0015 0.18 13.8 1.1 1 23 630 653 630 653 0.90

10 12 0.04 4.9 9.3 0.4 1 23 661 684 661 684 0.94

11 12 0.0015 0.19 13.8 4.0 2 23 691 714 690 714 0.93

12 12 1.9e-05 0.0023 19.8 1.5 1 22 720 741 720 741 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0054	0.66	12.1	1.8	2	23	80	101	79	101	0.96
2	12	0.012	1.5	11.0	0.7	3	23	109	130	107	130	0.94
3	12	1.8	2.3e+02	4.1	0.2	2	21	138	157	137	160	0.81
4	12	0.0053	0.66	12.1	3.7	1	21	166	186	166	189	0.90
5	12	9.3e-06	0.0011	20.7	1.2	3	23	197	217	196	217	0.99
6	12	0.008	0.99	11.5	0.4	1	20	223	242	223	244	0.94
7	12	0.013	1.6	10.8	1.5	3	19	264	280	263	285	0.92
8	12	0.0045	0.55	12.3	2.4	1	23	601	623	601	623	0.98
9	12	0.0015	0.18	13.8	1.1	1	23	630	653	630	653	0.90
10	12	0.04	4.9	9.3	0.4	1	23	661	684	661	684	0.94
11	12	0.0015	0.19	13.8	4.0	2	23	691	714	690	714	0.93
12	12	1.9e-05	0.0023	19.8	1.5	1	22	720	741	720	741	0.95

Sequence Information

Coding Sequence: ATGGAGTCGATTAAAGTCGAATTAAGTGTACCATGTTATTACAGTTTATTGTTCACAGAATCTGAATCTGCCGAATCGTCCTATAATAAGACTAAATCACAAGATGGTGTGTATGATGAGTTGGGAGCAGGGCTTCCAAGTCACGGCTCCCTTCTGGGCCCAGACGACGTGTTGGCGCAGTTCCTCACCGAGGATGAGTTGTTCGAGGAGCCTGATCTGAATGGACCCACCACCCTGCACTGTGAAATTTgcagtaaaaagtttgacaatgCCAAGAAATATTATGGTCATTTGAGGGTCCATTCCAAGGACAACCTTTGGATTTGTGagAAATGCCCTGACCAAAGATTTTCTACCAAGCAGCAGCTCATGAAACACAGCCTCACACACAAACCCCTGGAACGCATGTGGCGTTGCCCGCAGTGCACCCTGTCCTTTGAGGCACTGTGGCGGATGCAGCAACACTTATTTGCTAAACATCGAATTCACAGGCCACACAAATGTGATAAATGTGAGATGTCCTTCAATAAACCCTGCGATTTAAAGAAACATAAAGTTGCAGTACATGATTGTGTCAAAAAGCATGGCTGTACCGTTTGCAGTGCGCAGTTCAAGGACAAGTCAAATTTAAAAAGGCACATGTTGcgccacactggagagaaaccattccattGTCCTGGCTGTGGGAGCAGGTTTCAACAGGTGGCTTCGTTGAACCGACATAAAGCGAAGTGTGCCCTTAATAAAAATAGCAATGAAATAGGAGACAAATCTGTGCGGAAGAATTACTGCCGGGTGTGTGGAATGACCTTCAAGTACAAAAGTGCATTGCTGGAGCATTGCGTtagACAACATAATAACAATGCCAGTGATGCTGACAAAGCAGAAAAATCTAATCAGTTACAAGCGGACACAAACAGAACTGTTGATAATATTGTTGATGATATCCTATCCGCGGAAGATGACTACATGACCATGTCCACACAAAATGAAATACTTAACGTTTACAACAATCCAGCCGAGGTCGACACTAACACAGATAATCTCATGCAAATAGAATTCCTCAAAGAAATGAATCAATTACATATACTTGATGATGAACTGTTCTATAATGATATTGATTTAGATAGCTTTCACAGCAATCAAATATTTAACActacaaataatacaaatatagattataataatgaaaGAAATTCTGAAATCCTTTTTGATTATACCGAGGCAGGCAAGAGTGTAGATCAGGATATAATGAATGCTCTGTATCATGTGAAAGGTGAACATTTGCCCGATGAATTGCTAAATGTAGCCGAAACTAATAGTTTTAATGAGAAGCAGCCAGAAACAGTGAATCCTGAAACAGTGAACCCTCCAGTTTCTGTCAACGAGTGTGCTACAATATTCGAAAGTGATGTAGATTTGGAATCCAGTGCTCACTTAGCAGCAAATTTAAGTCAATTAATTGGTGAGAACAGTGTACAGTATATATCGACGGAAGACGATGATACATTTATTATAAGTCTAAATAGTGAAATCGACGCTGAACAATTAAGTGATATGCTAAATATAGGACTAGCAGGTGATAATCAAAAAGATAAAGTAGAAGAAACTCAACAAGTAATAAAGAAAGAAATTGATAATATAGAAATTGCAGACAGTTATGCTGATATTGTGGTAGAAATTACAGACCTTGATAATGATCCAGAAGAGGAACCAAAGGATGTAAACGATTACTGTATAGATAAAGACAAAGAGAGTAAAACAAAGGAACCTGTAGCCAAAACGAAAAAGACTGTACTTTTTGTTTGTCGCACGTGTAATAAAATCTTCCATAAGGGGGATAACTACAGATCTCATATAGCGACGCACAACCCGTCGCTGCGTCGCCACGTGTGTAGCGTGTGCGGCGCCCGCTTCGGCTACCGCTCGACCCTCAACAAGCACTTCCTGGCGCGCCACCGCCccgccgtgctgcgcgcgcacgcCTGCCGGCTGTGCGACAAGCAGTACAAGGCCGCTTGGATGCTAAAGGACCACTTGGCCCGGGACCACGAGAGGCGAGCGCCGCACGCGTGCGATCACAAGGATTGCGGCAAGCGGTTCTTCAAGAAGTCCGATCTCGTCGTACATAAGAGGCTGCACACAGGCGAGCGGCCGTACTCGTGCGACATCTGCCGCATGTCGTTCCCGCAGCGCTCGCACCTCAAGCGGCACGAGCGGAAGGTCGACTGCACCAAGAGGTTGGTACGCTCCACAGATAACGTCTCTTGTTGTTTGTGA
Protein Sequence: MESIKVELSVPCYYSLLFTESESAESSYNKTKSQDGVYDELGAGLPSHGSLLGPDDVLAQFLTEDELFEEPDLNGPTTLHCEICSKKFDNAKKYYGHLRVHSKDNLWICEKCPDQRFSTKQQLMKHSLTHKPLERMWRCPQCTLSFEALWRMQQHLFAKHRIHRPHKCDKCEMSFNKPCDLKKHKVAVHDCVKKHGCTVCSAQFKDKSNLKRHMLRHTGEKPFHCPGCGSRFQQVASLNRHKAKCALNKNSNEIGDKSVRKNYCRVCGMTFKYKSALLEHCVRQHNNNASDADKAEKSNQLQADTNRTVDNIVDDILSAEDDYMTMSTQNEILNVYNNPAEVDTNTDNLMQIEFLKEMNQLHILDDELFYNDIDLDSFHSNQIFNTTNNTNIDYNNERNSEILFDYTEAGKSVDQDIMNALYHVKGEHLPDELLNVAETNSFNEKQPETVNPETVNPPVSVNECATIFESDVDLESSAHLAANLSQLIGENSVQYISTEDDDTFIISLNSEIDAEQLSDMLNIGLAGDNQKDKVEETQQVIKKEIDNIEIADSYADIVVEITDLDNDPEEEPKDVNDYCIDKDKESKTKEPVAKTKKTVLFVCRTCNKIFHKGDNYRSHIATHNPSLRRHVCSVCGARFGYRSTLNKHFLARHRPAVLRAHACRLCDKQYKAAWMLKDHLARDHERRAPHACDHKDCGKRFFKKSDLVVHKRLHTGERPYSCDICRMSFPQRSHLKRHERKVDCTKRLVRSTDNVSCCL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -