Basic Information

Insect: Ephestia elutella
Gene Symbol: -
Assembly: GCA_018467065.1
Location: CM031574.1:10707080-10731942[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0009 0.11 14.5 0.3 3 23 368 388 367 388 0.97

2 7 8.3e-06 0.001 20.9 0.6 1 23 391 413 391 413 0.97

3 7 1.1e-05 0.0014 20.5 6.4 1 23 419 441 419 441 0.99

4 7 7.1e-07 8.7e-05 24.3 4.5 1 23 447 469 447 469 0.99

5 7 1.2e-06 0.00015 23.5 2.4 1 23 475 497 475 497 0.99

6 7 1.7e-05 0.0021 20.0 0.6 1 23 513 535 513 535 0.98

7 7 4.3e-06 0.00053 21.8 3.5 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0009	0.11	14.5	0.3	3	23	368	388	367	388	0.97
2	7	8.3e-06	0.001	20.9	0.6	1	23	391	413	391	413	0.97
3	7	1.1e-05	0.0014	20.5	6.4	1	23	419	441	419	441	0.99
4	7	7.1e-07	8.7e-05	24.3	4.5	1	23	447	469	447	469	0.99
5	7	1.2e-06	0.00015	23.5	2.4	1	23	475	497	475	497	0.99
6	7	1.7e-05	0.0021	20.0	0.6	1	23	513	535	513	535	0.98
7	7	4.3e-06	0.00053	21.8	3.5	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGGATCGAGAACAGTGCATTTCTTGTCTTCGAAGTATAAGTCGAAGCAATAACAGTGTAAGAAGATCCTACCCTTTGACTACGCAGCACTTCCAGCAACATCCATTTCTGATTGATTATTTGGCTGAAGttagaaatattattgagATATCCAGTGAAGACCGGATTTGTAAACCTTGTTTTCAACAAGCAAAACGCTATATTCAACGAGGCGAGTTGGACACACAACGTGAACCAGTCGCAGCTGAGGGTGATGTTCAATCCGTAGCTGACGAACCAAGAAGATCTCAGCCCGATCCTGAGCCAGCGGATAGTGACCGTGAGATTGTTGACATCGAATCCGTACCTGACAGCTCTGAACGAGAACAAATGGTGCCAGTGGGACAGTTGCTGGACAATATGAAGCCGGTAGTAGCATGTTACATCTGCCTCGCTCAACTCAGGAGGTGCCGTTCATTCATGGAGAAGTCGGTTAAAGCGGATGAAGTGCTAAATGGCATTTTGATGAACAATACGCTGACTATGAAGTCTGTTGCCCGCATCGACCGTAACTCTTACAATCTATGCCATACTCTGTCCATTAAAGTGACATCAGAGGATCAAGAAGTGGATGAAGGGAAGATTAAGAAGGAGTTAGAGTTTGAGTTTGCAGGGGCAGAGGAAAACCAAGTTGAGGCCACCTTTGAGGAACAtactgACTTTGCTCCACTGAACGAGCCAGTAGTGCACATAGATGAGAAAGCGTTTGAACAACCAGTTGATGCCGAGTTCTTAGAAGTTACGTATATGAAAGAGGAGAAGGAAGAAATTGAACCGCCAGTATCAGACGCAGACGACAATCGCGAAGCTGATTCAGAGGACGATATTCCATTGCGACCGGTTTCAGTTAAAAGTGTTAAAACCAACAAGAGGAAAAGGGATGGAGATAGCGATTGGAAACCTGCCAAAAAGGTGGCATCTGAAAAAGCACCGGCTGCTAAAAAAGAACCGACTACTAAAAAGGAACCAGGGAAGCAGAAGAAACGTGTCAGACTCATAAAGAAACGAAAGCTCGATGACCACGACAGAGTTCGTAAAATCACTTTCAAAAGAGCACGCGCGTGCCGGATTTGTCAAACTAAATTTGCAACAGAAGATGAGTTCCAAGCTCACTTAAAAGAACACAGACCTTACTCCTGCGACATTTGTCAAAAGAGATTCAGAACGAACCCACTCTTAAAGCAACATTTAGTTATACATAGCGGCGAGAAACATTTTCAGTGTTACGAATGCGGTACTCAATTCAGTCGCCCGCACCATCTGAGGAATCATTTCAGAACGCACACGGGCGAGGTGCCTTACGAATGCAACGTCTGCCACCGTAGATTCAATAATTCCAGTAATCTTAGACAACATTTAAAGAGACACACCGGCGAGAAACCTTATCAATGTGATGTGTGCCAGCGGAAATTTGCTCAGAAAAATACCTTGCAGAAGCATTTGAAGACCCACGCTCCTGGTAGATGTAATGATATACAAAATACTAGAGAGAAACCTTACAAATGTGCTGAGTGCGGCGCTGGTTTTGTCCGTATCTATCATTTGAAACGACATTTGACTATACATACAGGCGAGAAACCATtcgaatgtaatgtttgttatAGGAAATTTAATAGGAAAAGTACGCTGACAACGCATTTGAAAACGCACACGATCGAGCCTAAACCGTACGACTTTATATTGTGA
Protein Sequence: MDREQCISCLRSISRSNNSVRRSYPLTTQHFQQHPFLIDYLAEVRNIIEISSEDRICKPCFQQAKRYIQRGELDTQREPVAAEGDVQSVADEPRRSQPDPEPADSDREIVDIESVPDSSEREQMVPVGQLLDNMKPVVACYICLAQLRRCRSFMEKSVKADEVLNGILMNNTLTMKSVARIDRNSYNLCHTLSIKVTSEDQEVDEGKIKKELEFEFAGAEENQVEATFEEHTDFAPLNEPVVHIDEKAFEQPVDAEFLEVTYMKEEKEEIEPPVSDADDNREADSEDDIPLRPVSVKSVKTNKRKRDGDSDWKPAKKVASEKAPAAKKEPTTKKEPGKQKKRVRLIKKRKLDDHDRVRKITFKRARACRICQTKFATEDEFQAHLKEHRPYSCDICQKRFRTNPLLKQHLVIHSGEKHFQCYECGTQFSRPHHLRNHFRTHTGEVPYECNVCHRRFNNSSNLRQHLKRHTGEKPYQCDVCQRKFAQKNTLQKHLKTHAPGRCNDIQNTREKPYKCAECGAGFVRIYHLKRHLTIHTGEKPFECNVCYRKFNRKSTLTTHLKTHTIEPKPYDFIL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -