Eelu044108.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- zfy1
- Assembly
- GCA_018467065.1
- Location
- CM031594.1:9967248-9970078[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.2 25 7.1 8.3 3 23 176 197 174 197 0.95 2 18 3.1e-05 0.0038 19.1 1.0 1 23 206 229 206 229 0.97 3 18 0.0068 0.84 11.7 0.9 2 23 242 264 242 264 0.97 4 18 0.00018 0.022 16.7 0.8 1 23 273 296 273 296 0.97 5 18 8.4e-05 0.01 17.7 1.9 1 23 308 331 308 331 0.96 6 18 0.00033 0.041 15.9 0.9 2 23 355 377 354 377 0.97 7 18 0.0017 0.21 13.6 1.2 2 23 387 409 386 409 0.96 8 18 0.12 15 7.8 2.8 3 20 415 432 413 437 0.88 9 18 0.00013 0.015 17.2 0.0 2 23 439 461 438 461 0.96 10 18 0.0015 0.19 13.8 1.1 3 23 471 492 470 492 0.96 11 18 0.00013 0.015 17.2 2.9 1 23 497 520 497 520 0.94 12 18 0.0015 0.19 13.8 2.1 3 23 533 554 531 554 0.96 13 18 0.0028 0.34 13.0 4.3 1 23 575 598 570 599 0.95 14 18 0.83 1e+02 5.2 0.2 2 23 605 626 604 626 0.90 15 18 0.015 1.9 10.6 1.8 2 23 631 652 631 652 0.98 16 18 3.6 4.4e+02 3.2 2.3 3 23 660 682 658 682 0.91 17 18 0.017 2 10.5 0.1 1 23 718 740 718 740 0.97 18 18 0.24 30 6.9 2.0 1 23 746 769 746 769 0.96
Sequence Information
- Coding Sequence
- ATGTCAACAAATGAAGACGTCAAAGTTAAACTTGAAAATGATATTAAAATCAAGGAAGAAAGGAAAGATCCTACATGCTTCTTGCCCGACGAGCCGATGACGTACGAaattaagaaaaagaagaagaaaaaaaagaaaaagaggaACAAAGAGCGAGATCCGTTCAGAGATTTGGCTGTGAAGAATGATGAGCTCACGCTGGAGATGCAATTGGACCCGGAGGTTAATATAAAAGTGGAGAATATTGAAGTAGAGTTAGATTTCAATGATTTCGCAAATAACACTGGTCTGATGGTGGAAGGGCCACAAAGTGAAGAAAGCCAAGAACCAGCAGTCAAAATCGAAGACCAAAACCATGAGGCAGTTCTGTTGACTTTTGAGAGTGTAGTCAATAAAACACTACTTGAATACAGTGAAAACCTCAAATATGATGACGCAGGGAACGTCATAGGCTTTGAACAGCAAGATACATCAGTGTTGGGATACAGCCAGGGAATGGCTATGGCAACCGCGCCCACACATTTATGCAAAGTATGCCATCTAGTCTTTCAATCGCACAAAACTCTACGAATGCACCAGAAAAGAAAACATAAAGCGTATAGAAAATACTTTCAACACGTTTGTGATTATTGTGGCATGTCGTATGAACAAAAAAACAGTCTAGTCGCTCATATTAAGAGGAAACACGGACCTGATGCTACACCAGATGACAGGGAAGAGAGGACTTGTGATGTTTGTGCTCTAGTCTTCAAGGGGAACACACGGTTACGAATGCACATGAGAAGAAAACACGGTTCGTTCCAAGATTCATTCAAGTACAGCTGTGAGCAATGTGGGCTCACATATGATAAGCAAAGAAGCTTAATCGTACACCAACAAAGGAAGCATTCTGTCATTCAAAAACCAGTCTTAAACCAATGGTTCAACTGTCCTTTTTGCCCAAAAATTTTTACGAGACGTGAAACGTATTCGAGACATGTTCAAAGGAAACATCAAATTTTGGACAAAGATGAAATTAAAGAAGAGTTTGTTAATGTTAAGAATGAAGAAACTGGTGAGATTACTTGTAAACAGTGCCCATTGGTTTTCTCTTCAGTCAATTTCTTGAAGTTACACATGAGAAGGAAGCATAACGCTTTGACAGAGGACTTTAGACTTAAATGTAGGATATGTAATTTATCATATGATAAGATAGAGAGTCTCAAAAGGCATGTAAGAAGGAAACACGGTAAAAATTCGCATTGTGAAGTGTGCAATAAACAATTCGATAATAAAGAGGCGTATTTGAATCACTCACATGTGAAAACTCACTCGGAATGTGGAATTTGTGGACTGATATTCGCTTCAGAGGGTAATTTAGGTAAACATATGCGGTTGACACACAAAATTGATACGCCGAAACATGTATTCTGTAATTTGTGTAACGAAGGATTCTTTGATAAACGCCAACTGAAGTCACATTTACTGAAAGTGCATTTAAAAGTGTCATACACTTGTACGTATTGCAGTAAGGTGTTCAAGGCGAAAGAAAGTTACCGGAGGCACATTTTGTTTAAGCACCCGGAaagtaatagcatgaaaaatcAGGTGCAAAACTGTGAGCACTGTTCGGCTACTTTTCCTGACGAATTTGAACTCTGTCGTCATATAAATAGCGAACATCGAAACAAAGAAATGAAAGAAGAGTTAGTATTGGTCAAAGAGGAAAACTGTGATAAATCGTTTCAGTGTACAAAATGCCCGGAATCGTACACAGTTTGGGAGCAATTGAGGTTACATCACGAACAAAACCATCATATGCCAGAAGAAACCCAATGTCAAGTGTGCGGAGAAATGGTGCCAGGGAACTCTTTAAagaaacatattaaaaatagcCATGTCGAAGAACCACAGTGTAAATATTGTGAGTTCAAAACGAATAACCGAGCGAGTATGACACAGCATATTTTAAGGCACAAAAATATCACAACATTACACTGTGACTACAATGGTTGTCGATATAAAACGTATTACGAAGGTGCTATGCAAAGACACAAGAGGAAGCATGCCGAGATTGGAGTCAAACTTCAATGTACTAAGTGTCCGTTCCAAAcgatgaataaatatattttgaagtATCATGAAGAAGCTCATACGACAGGGAAGAAGCGTTATGTATGTGATCAGTGTGATTATGCAACGATATTGCCTGCGAATTTGGTGCAGCATAAGTATAAGCATTCTGCTGTAAAGAGATTTAAATGTGAAGTGTGTCCATTTGCCACAAAGTACAATACGTCGTTAAGATTTCATGTGAAGAAGAAACATTGTGATCTCCCGTCGCTCagttga
- Protein Sequence
- MSTNEDVKVKLENDIKIKEERKDPTCFLPDEPMTYEIKKKKKKKKKKRNKERDPFRDLAVKNDELTLEMQLDPEVNIKVENIEVELDFNDFANNTGLMVEGPQSEESQEPAVKIEDQNHEAVLLTFESVVNKTLLEYSENLKYDDAGNVIGFEQQDTSVLGYSQGMAMATAPTHLCKVCHLVFQSHKTLRMHQKRKHKAYRKYFQHVCDYCGMSYEQKNSLVAHIKRKHGPDATPDDREERTCDVCALVFKGNTRLRMHMRRKHGSFQDSFKYSCEQCGLTYDKQRSLIVHQQRKHSVIQKPVLNQWFNCPFCPKIFTRRETYSRHVQRKHQILDKDEIKEEFVNVKNEETGEITCKQCPLVFSSVNFLKLHMRRKHNALTEDFRLKCRICNLSYDKIESLKRHVRRKHGKNSHCEVCNKQFDNKEAYLNHSHVKTHSECGICGLIFASEGNLGKHMRLTHKIDTPKHVFCNLCNEGFFDKRQLKSHLLKVHLKVSYTCTYCSKVFKAKESYRRHILFKHPESNSMKNQVQNCEHCSATFPDEFELCRHINSEHRNKEMKEELVLVKEENCDKSFQCTKCPESYTVWEQLRLHHEQNHHMPEETQCQVCGEMVPGNSLKKHIKNSHVEEPQCKYCEFKTNNRASMTQHILRHKNITTLHCDYNGCRYKTYYEGAMQRHKRKHAEIGVKLQCTKCPFQTMNKYILKYHEEAHTTGKKRYVCDQCDYATILPANLVQHKYKHSAVKRFKCEVCPFATKYNTSLRFHVKKKHCDLPSLS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073068;
- 90% Identity
- iTF_00651990;
- 80% Identity
- -