Eelu036227.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031587.1:6572709-6578010[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.022 2.7 10.1 2.2 1 23 50 72 50 72 0.98 2 30 0.93 1.1e+02 5.0 0.0 3 23 101 122 100 122 0.92 3 30 0.087 11 8.3 1.2 2 23 143 165 142 166 0.94 4 30 6.6e-05 0.0081 18.1 4.0 1 23 170 193 170 193 0.96 5 30 0.0067 0.83 11.8 5.2 1 23 197 220 197 220 0.95 6 30 0.24 29 6.9 1.3 2 23 223 245 222 245 0.95 7 30 0.00033 0.041 15.9 0.8 1 23 309 332 309 332 0.94 8 30 3.3 4e+02 3.3 0.0 2 23 361 383 360 383 0.95 9 30 0.00029 0.036 16.0 0.2 1 23 405 428 405 428 0.96 10 30 0.00015 0.018 17.0 4.0 3 23 435 455 433 456 0.94 11 30 0.0004 0.05 15.6 0.8 1 23 461 484 461 484 0.94 12 30 0.0028 0.34 13.0 0.4 3 23 491 512 490 512 0.97 13 30 0.0031 0.39 12.8 1.6 1 23 516 539 516 539 0.97 14 30 0.79 97 5.2 1.0 2 23 546 567 545 567 0.95 15 30 0.037 4.5 9.4 2.5 1 23 573 595 573 595 0.97 16 30 0.042 5.2 9.3 3.4 1 23 637 659 637 659 0.95 17 30 0.018 2.2 10.4 0.0 3 23 688 709 686 709 0.91 18 30 0.01 1.3 11.2 2.8 2 23 730 752 729 752 0.96 19 30 0.016 2 10.6 0.4 2 23 758 780 757 780 0.95 20 30 0.002 0.25 13.4 2.4 1 23 785 808 785 808 0.97 21 30 0.058 7.2 8.8 4.0 3 23 812 833 811 833 0.94 22 30 0.00052 0.064 15.2 0.9 2 22 840 860 839 860 0.96 23 30 0.0081 1 11.5 1.9 1 23 915 938 915 938 0.95 24 30 0.11 13 8.0 0.1 3 23 1012 1034 1011 1034 0.95 25 30 0.0013 0.16 14.0 0.4 3 23 1041 1062 1039 1062 0.95 26 30 0.0087 1.1 11.4 0.3 1 20 1067 1086 1067 1090 0.91 27 30 0.029 3.5 9.8 0.3 2 23 1096 1118 1095 1118 0.90 28 30 0.17 20 7.4 3.9 2 23 1123 1145 1122 1145 0.96 29 30 0.018 2.2 10.4 1.6 2 23 1152 1173 1151 1173 0.96 30 30 0.014 1.7 10.8 1.3 1 23 1179 1201 1179 1201 0.97
Sequence Information
- Coding Sequence
- ATGTACAAGTACATCTATCGCGTTCTAACATACGCATTTCATGAAAATGGGCCGGCAAAAGTGTTGAATGCTAACGTAAAGAGAAGACAAAATTTACTCACATTATTCAACAATACCTCTTTGATACCATTCAAATGGCGGGCCAGATACATGTGTTTTTACTGCGGGCAACACCTGCCCGACTCCGCAAAAGTCAGAAAACATACGAAATCTCACGGACCGTGCACAGACAAAGACCGTGCTTTAAAACTTGTCTATAATTGCGACGTTGATGTCAAAATCGATGTCTCGATCGTCGCCTGCGATATATGTGATACTACTCTAAACAACATCGAAGACGTTATAAATCATCTGACTCTTCAACATGATTTGCCCTATCACAGAGACGTAGAAATGACTATCTCGTGTTATCGATTAGTAGACCTACAATGTTTATATTGCGATCAGTCGTTCGGGGTTTTTAACAAACTAGTGACTCATGTCAATTCTAATCATCATCCTTACAACTTCTCATGTCACGAATGCAACCAACAGTTTAGTACGAAGAGAGATCTGCAATCACATTTGAGATTTGATCATAAAACAAACTTCAGTTGTAATATATGCAAGCAATGTTTTGTTAATTTTGCGGAATtgcataaacataaacaaaacgATCACACTTTAGTTTGTAACCTTTGCTTAGCAACCTTTAAATCTGAAAGTGAAAGACTGCATCATTTGACAACTAATCATGCCTTAGATACCAATATTGAAAGTACAAAAAAACGTTCAAAAAAACCCGCTTCAAAACGTAAGGTTGCTGAAAATTCGAAACTAAAAGATAATGATCATAAAAAAGCATCAGTTATTGACATAAGGAATAACGTAGCCTGTATTCTCAACATGTCAACTGCAGTTCCCTTTAAGTTTTTCCTACATCATTTTCGATGTTTCTATTGTTCGAAAGACTTTCCAGATAGCGATTTACTGAAGCAACACACTATTCTTGAGCATCCTCACTGCGATACGAGAGTTCGAAGCTTGAGCCTACGCAATAGGAAAgacggtgttaaaattaaagtGGACGTGTCCGAATTAACTTGCAAACTGTGTTTAGTACCGATCAACGATTTGGACACGCTCGTAGATCATATAATAACAGAACATAGAGCGGAGTACGATAAGTCTGTGGACAATTATTTGGAGTCGTACAAATTGATCAAAGACAATTACCCCTGTCCATCTTGCCCAGAAGTGTTTAAATATTTCGGGAATCTGCTTAGACACGTGAGCAGCTTTCACgcagataataaaataatctgcGTGCATTGTGGCATGTGTTTCCGGACCGATCCAAACTTGAGAGCCCACATGAACCGCCATCATAAGCCGCACAATCACAAGTGCACAACTTGCGATGCAAGCTTTCCAACGAATGACATGCTCCAACTGCATCTCGGAAAGTTGCACGGCACCAAAATAGCAATCTGTGACTTGTGCTCTGAGCAGTTTTCTTCTAGAAACGCGATGAGACGTCACCAAATAACCGCGCATGGAGTAGGTCACAAGTGCGATTATTGCGGCAAGTTGTTCGCTAAGAACTCTGTAAAAGAAGAGCATATTAGGAGGCTGCACTTAAAAGAGAAGAATGTGAGTTGTCTGTTGTGTACGGAGAGGTTCTTCGACATGTTTCGGCTGAAGATGCACATGGTGAAACATGCTGGCGAAAGGAACTTCCATTGTGATATTTGCGAAAAGAAATTCTTGTGGAAGAAGAACTTGAGGGCTCACATGACTATGCATGTTAAAAAAGCTCATTATGACGCGCCCGCGCGCAGAGAAGCCCGCGCATCTGAAATCAGGAGGACTAATTTACAAATATTGTTCAACAACACCACAATCTTCCCATTCAAATGGCGTAGCAATTTTCTCTGTTTCTATTGTGGCAACACTTACAAAGAATACACGGAGTTCAAAAAACACACCAAATCGCACGGGCAATGCACCGCGACGGACCCTTCGTTTAAAATCATTAATGGCAAATACATTGAAATCAAAATAGACGTGTCTGATATCAATTGTAACATATGCGATGAACCGTTCAATAATCTAGACgaaatcatagaacatattattGGAAAACATAACTTGAAATACGATACGGGTGTGCATATTCCGTATCAAGCGTATAGGTTGCAAGATTTGAAATGCTTGCATTGTGATCTGCAATTCAGTTATTTTGGCTACTTGATACACCACGTGAACACTTTGCATCCGCGGGACAATTTAGTATGTGTCGAGTGCGGGGCtagttttaacaaaaataactatTTGATGTTTCACATGAGGAATTTCCACCGTAAACAAGGCTATACTTGTGATCAATGTCAGTTGAAATTTGATTCGTACCATTTGCTACGAAGTCATCTACAAAGCGCGCACTTGAGGAATTGTAAAAACTGCGATTTCTGTTGTGATTCTCGCGTTCTATTACAAAAACATATCCAAGCTGAACATCCTGAAGATGGTAACGTAAAATGTTCCTATTGCGGTAGGAAATGTCGCAGTACGGATGGCTTGGCTGTGCATATGAGGAAATGCCGAGTTAAACTTGAGAACCAGAAAAATGATAGTTTATTACCTCAGAATATAACTGTGAACGTGAAGCCTAAGAAAAATAGCAATCTAATGCAAATAAGGCAAAATGTACAAACCGTATTAAACATGTCCACTGCCGTTCCCTTTAGTTTTTTTAACAGATTTTCCTGTTTCTATTGCTCGAAGAAGTTTGCTGAATTCGATTATCTGAAAGAGCATACTAACTTAGAACACCCGGTATGTGATGTCAAAGCGAAATCTATGATGACGATGAAAGGGAAGAATCTACGGGTTAAAGTTGATATTAGTGCCCTATCCTGCAAAGTATGTTCACAGCCCATGTCAGCCCTGGACGTGTTGATAGACCATCTGATAGCCGAGCACAAAGTGCAATACGATAAATCGCTAAATGATTGTATAGAGCCGTACAAGATAGACAAAGATGGCGTCGCTTGCCCTCTGTGCCCTCAACAAGTGTTCAGTTACTTTGGAAGTCTGCTGAAACACATAAACAGTGCGCATAATGACAATAATATCATTTGCGTTTTTTGCGGCATGTCTTTTAGGAGTGAAACGAATATGCGCTCGCACATATCTCGGTTGCACAAACGAGAAGGGTACAAATGTTTAGTCTGCAATTTAGACTTCAATTCTAGAGACGCTTTACAGTCGCATTCTGGTAACGTCCACGGCACCAAGATCTCGAAGTGTCCGGAATGTACGCAGGCTTTCTCCTCCAAAAATATCATGAGGAGACACCTGATAGATGTGCACGGTACAGGGCAGAAGTGCGTTCATTGCGGGAAGTTATTCCCTAAAAAATGCTTGATGCTCGATCATGTGCGGAGCACGCATTTGAAAGAGAAGAATGTCCAGTGTAATATGTGTCAGCAGAAGTTTTTCAACGGACGTCTTCTGAAAAAACACTTGGTCAAACATTTTGGCGAACGCAACTTTCATTGCGACATTTGCGGCAAGCAGTTTCTGTGGAAGAAAAATCTCATTGTCCATATGTCTTCTCATATCGAAAATTGCCATCCCAAAATGCAAACTTAG
- Protein Sequence
- MYKYIYRVLTYAFHENGPAKVLNANVKRRQNLLTLFNNTSLIPFKWRARYMCFYCGQHLPDSAKVRKHTKSHGPCTDKDRALKLVYNCDVDVKIDVSIVACDICDTTLNNIEDVINHLTLQHDLPYHRDVEMTISCYRLVDLQCLYCDQSFGVFNKLVTHVNSNHHPYNFSCHECNQQFSTKRDLQSHLRFDHKTNFSCNICKQCFVNFAELHKHKQNDHTLVCNLCLATFKSESERLHHLTTNHALDTNIESTKKRSKKPASKRKVAENSKLKDNDHKKASVIDIRNNVACILNMSTAVPFKFFLHHFRCFYCSKDFPDSDLLKQHTILEHPHCDTRVRSLSLRNRKDGVKIKVDVSELTCKLCLVPINDLDTLVDHIITEHRAEYDKSVDNYLESYKLIKDNYPCPSCPEVFKYFGNLLRHVSSFHADNKIICVHCGMCFRTDPNLRAHMNRHHKPHNHKCTTCDASFPTNDMLQLHLGKLHGTKIAICDLCSEQFSSRNAMRRHQITAHGVGHKCDYCGKLFAKNSVKEEHIRRLHLKEKNVSCLLCTERFFDMFRLKMHMVKHAGERNFHCDICEKKFLWKKNLRAHMTMHVKKAHYDAPARREARASEIRRTNLQILFNNTTIFPFKWRSNFLCFYCGNTYKEYTEFKKHTKSHGQCTATDPSFKIINGKYIEIKIDVSDINCNICDEPFNNLDEIIEHIIGKHNLKYDTGVHIPYQAYRLQDLKCLHCDLQFSYFGYLIHHVNTLHPRDNLVCVECGASFNKNNYLMFHMRNFHRKQGYTCDQCQLKFDSYHLLRSHLQSAHLRNCKNCDFCCDSRVLLQKHIQAEHPEDGNVKCSYCGRKCRSTDGLAVHMRKCRVKLENQKNDSLLPQNITVNVKPKKNSNLMQIRQNVQTVLNMSTAVPFSFFNRFSCFYCSKKFAEFDYLKEHTNLEHPVCDVKAKSMMTMKGKNLRVKVDISALSCKVCSQPMSALDVLIDHLIAEHKVQYDKSLNDCIEPYKIDKDGVACPLCPQQVFSYFGSLLKHINSAHNDNNIICVFCGMSFRSETNMRSHISRLHKREGYKCLVCNLDFNSRDALQSHSGNVHGTKISKCPECTQAFSSKNIMRRHLIDVHGTGQKCVHCGKLFPKKCLMLDHVRSTHLKEKNVQCNMCQQKFFNGRLLKKHLVKHFGERNFHCDICGKQFLWKKNLIVHMSSHIENCHPKMQT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -