Basic Information

Insect: Ephestia elutella
Gene Symbol: clz9
Assembly: GCA_018467065.1
Location: CM031576.1:11999571-12002321[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-07 0.00018 22.7 0.0 1 40 8 46 8 50 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-07	0.00018	22.7	0.0	1	40	8	46	8	50	0.86

Sequence Information

Coding Sequence: ATGGCGCCGAAAAAGGACTATACCCCTGAGCAGATGGGGCAAGCTATAGAAGCTGTTCGGCAGGGAGAGAAGATAGCTACGGCTGCAAAGAGGTTTGGAGTGCCGCGTATTAccctttataataaaatatcggGCAAAAGTCCTTTGGAATGTGCTATGGGGCCACAAACAGTACTTTCAAAATCAGAAGaagatattttagtaaaatGGTTGCTTGTGATGAGCGAAAGACATTTTCCAGTAAATCGAGACTTATTAATGGAAAGTGTGCAAAGAATTATTGTCGAACAGGGGAGACCTAATCCCTTTACTAATAATAAGCCAGGAAAAAAGTGGTTCCAATCCTTTTTAAAAAGACATCCGGATATCGTTGAAAAGACTGCACAAAATCTCACGAAATCAAGAGATAATGTATGCGAAGAAGATCTACGAAATTGGTTTTCTGAAATCAGCTTTTATTTAGAACAAAAAGGTTTGAAAGACATTTTGCAAGATCCAAGTCGAATTTTCAACACAGATGAAAGTGCATTCTTTTTATCACCAAAAGCAGGCCGGGTGCTTTGCCAGCGGGGTGAAAAACACCTTTATAATTTTTGTGGAGATGAAAAAGAAAACCTTACTGTTCTTGTAACAGCAAATGCCGCGGGACAACTTGCTCCCCCTATGATTGTCTTTAAATATGAAAGAGTACCGGCGCACATATCAGCTAGCGTCCCCGGTGATTGGGGTATAGGAAAATCAGAATCGGGCTGGATGTGCGGAAGCACATTTTATGAATTCatcacaaatatttttgatCCTTGGCTAAAACAGGAAAATATTCAAAAGCCTGTACTCTTTTTCTTAGACGGCCATAAATCACACCTAACGTTGCATTTATCGAATTATTGTTCAGAGAATGGGATAGAGATAATAGCTTTGTACCCAAATTCGACGCATATATTGCAACCAATGGATTTGGCAGTATTTCGACCCTTAAAGGTAGCTTGGCGAAAAGAAGTTTCAAAATGGCAGCTAGATCACCTTGGTCAAACTTTAAAAAAGGAAAATTTTGCCCCAGTGCTTCGAAATGCACTAGCTACAATTTCAAAAGAATGTATTCAAAGCGGGTTTAGAGCTGGAGGTTTGTACCCATTTGGACCGGATTATATTGATATGAGCAAAATAAAGAGTAAAAATATAACTCAAAAAGAGCTTGACCCAAAACAAATAgagtttattaaatatttagattCAGAAATAGTAAAGGTTTTTTCAGCACAAAAGTTAGAATTGTTCAATAAACTATATTACAAGGACAGAGACACTTTACAACAGGTTTTACATCCAGAAGATGAGTCTTTATACGTGATTTGGgccaaaaataaacatttgagtCAGAGCGCCATTCAAGTAGATCCGACATCACAGACTGATAATGCTGAAGCCTCTAATGAATCGCAGCCTTCGACATCTGATATTGACAATATTATAGCTTTAAACACAGTCAATGAAAAGTCTACTGACGACCGTATAAGCTCAAAGCCACAAGAGAATCTTTTGGAAACTGTATTAGGAGAAGATATTACATATAGCCAGAGCGTTATCGAAGTGACACCGACATCTCCGACTGATAGTGCTGTAGCTTCCAATGAAGTGCAGCCTTCGACATCAGACATTGGCAATGTTGAAGCTTCCAGTCCAATAAATGAAATGTCTACTGACGACCATATAAGCTCGAGGCCACAAGAGAACCCTTTGAAAACTGTATTGGTTAAAATTGTTCCATATAGCGAGAGCGTTATCGAAGTGACGCCGACATCTCAAACTGATAGTAATATAGCTTCCAGTGAAGTACAGCCCTCAACATCAGGCATTGGCAATGTTATATCTTCTATCCCAATAAATGAAAAGTCTACTGACGACCGTACAAGATCAACGCCACAAAAGCACCCTTTGGAAACTGTATTAGGTGTAGTTATTCCATCCCcgtttaaaaataatcttttttggCCTGAAGAAAACGTAAAGGAAAAGAAAAGACATAAAAGAGAGAAGGTACCCTATGCGGTAACAAGTAGTGCTTGGCAAGCGTATCATATTAGAAAAAGCGcagaaaaacaaaaacaaacagaggaaaaagaaaaaagagcTAAGGAAAGACAAGCAAAGAAGATTTTGAAggaaatcaatttaaaacagaaaagtaaagtaaataagaagaaaaaacataaggAAGAAGATGCTACTTCAGATGATACAGATTTAGAAATACCCTATGCTGATAGTGATGATAGTTACAACGAACTACAAGATAATGATAGTACAGAAGAGAATGAAGAAAAAGCTAAACTTGTTCAGTCTAGGCGACGTAAAAGCTGTGGGTCGACGCAAAGGGGGAAGATAACAAAACGGATCCGAAAAGGTTATATGCAGGGTTCTTCTGAAAGCGACACAGAATCCGACGATAAACCTATTAGCCAATTGAAAGTACCATCAAAGCCTTCCTTTAAAACTGGACAGTTCGTAATAGTCAAATACGAAGGAGAATACTTCCCTGGTAAAATAGAAGCTGTTGATGGTAACCAATATGAAATTAGTACAATGGTGTTGTCAATGGGAAATTCTTTTCGATGGCCAGACAAACCGGATAAGATATGGTACAATATGGCTTCTGTTGTAGAATCTATAAGTATACCTTCACCTTTGAACAAGAGGGGATTCTTTAAAATTAAGGAAATGGAGAAATATTTACCCGATTTGTACCTATAA
Protein Sequence: MAPKKDYTPEQMGQAIEAVRQGEKIATAAKRFGVPRITLYNKISGKSPLECAMGPQTVLSKSEEDILVKWLLVMSERHFPVNRDLLMESVQRIIVEQGRPNPFTNNKPGKKWFQSFLKRHPDIVEKTAQNLTKSRDNVCEEDLRNWFSEISFYLEQKGLKDILQDPSRIFNTDESAFFLSPKAGRVLCQRGEKHLYNFCGDEKENLTVLVTANAAGQLAPPMIVFKYERVPAHISASVPGDWGIGKSESGWMCGSTFYEFITNIFDPWLKQENIQKPVLFFLDGHKSHLTLHLSNYCSENGIEIIALYPNSTHILQPMDLAVFRPLKVAWRKEVSKWQLDHLGQTLKKENFAPVLRNALATISKECIQSGFRAGGLYPFGPDYIDMSKIKSKNITQKELDPKQIEFIKYLDSEIVKVFSAQKLELFNKLYYKDRDTLQQVLHPEDESLYVIWAKNKHLSQSAIQVDPTSQTDNAEASNESQPSTSDIDNIIALNTVNEKSTDDRISSKPQENLLETVLGEDITYSQSVIEVTPTSPTDSAVASNEVQPSTSDIGNVEASSPINEMSTDDHISSRPQENPLKTVLVKIVPYSESVIEVTPTSQTDSNIASSEVQPSTSGIGNVISSIPINEKSTDDRTRSTPQKHPLETVLGVVIPSPFKNNLFWPEENVKEKKRHKREKVPYAVTSSAWQAYHIRKSAEKQKQTEEKEKRAKERQAKKILKEINLKQKSKVNKKKKHKEEDATSDDTDLEIPYADSDDSYNELQDNDSTEENEEKAKLVQSRRRKSCGSTQRGKITKRIRKGYMQGSSESDTESDDKPISQLKVPSKPSFKTGQFVIVKYEGEYFPGKIEAVDGNQYEISTMVLSMGNSFRWPDKPDKIWYNMASVVESISIPSPLNKRGFFKIKEMEKYLPDLYL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00888211; iTF_00888212; iTF_00888213;
90% Identity: -
80% Identity: -