Eelu020087.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031577.1:7348321-7349151[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-09 6.5e-06 27.3 0.0 17 38 1 22 1 27 0.86
Sequence Information
- Coding Sequence
- ATGGGCTACAGAAAAGCCGCTTCTGAATACGGAGTACCTCAGACTACTTTGGAGCGATATGTTAAGAAAATGAAAGAAGATGGTGAAGTTACAATTGGTGTACCTTTGGGCCCTAAAAAACCTATATTTACAACAAAAGAAGAAGACGAGATTATGGCATATCTAAAACATATGGAAGAACGTCTTTTTGTGCTGACAACTCTCGATCTGAGACGTCTAGCATATCAACTGGCTGTGAGAAATGGTAAGGCGCACAATTTTAATACTGACAAGCAGATGGCAGGGGTTGATTGGCTCAAAGGTTTCTTAAGGCATCATCCAGATTTATCCATTCGTAAGCCCGAAGCTACTTCAGCAGCTAGAGCAATGGGTTTTAATAAAGTGGCCGTTAGTAAATTCTACCAGTTGCTTGGAGAGATTTATGACAAGCATAAATTAACTCCTGGCAAATATAATTGTGACGGAACTGGTATCTCCGTTGTATCTAAAACCAAGAGCAAAATATTGGCCATGAAAGGACAAAAACAAGTAGGCTCATTATCATCTGCAGAACGCGGCCAGACTATTACAGTAGAAATATGTTTTAACGCTGCTGAAACCTACATGCCTCCACTGATGATTTTTCCGAGAAAACGAATGAAACCAGAATTATTAGATCACGCCCCACCAGGTACTGAAGGTGTTTGCAATGCTCGAGGCTGGATAACTACTGAAATATTTTTGACTTGGTTCAAAAAGTTCATCAGATTCTCCGGAGCTACTCCTACTAATCATGTGTTGCTGCTTCTAGATGGGCATGTAAGTCACACTCAAAATTTTGGAAGTAATTGA
- Protein Sequence
- MGYRKAASEYGVPQTTLERYVKKMKEDGEVTIGVPLGPKKPIFTTKEEDEIMAYLKHMEERLFVLTTLDLRRLAYQLAVRNGKAHNFNTDKQMAGVDWLKGFLRHHPDLSIRKPEATSAARAMGFNKVAVSKFYQLLGEIYDKHKLTPGKYNCDGTGISVVSKTKSKILAMKGQKQVGSLSSAERGQTITVEICFNAAETYMPPLMIFPRKRMKPELLDHAPPGTEGVCNARGWITTEIFLTWFKKFIRFSGATPTNHVLLLLDGHVSHTQNFGSN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00120409;
- 90% Identity
- iTF_00801721;
- 80% Identity
- -