Eelu047545.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- clz9
- Assembly
- GCA_018467065.1
- Location
- JAEMBS010000559.1:14768-21154[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-09 3.7e-06 28.1 0.0 1 43 14 56 14 57 0.93 2 2 0.94 9.8e+02 1.1 0.0 26 37 727 738 725 742 0.80
Sequence Information
- Coding Sequence
- ATGCcgaataaatatacaaaaaagaaGAAACCGTTATATACGCAGGAAGATATAAATCAAGCGCTTCAGGAagttaaaaataatcaattgtCGATGTATGCTGCTGCAAAGAAGTATAGGATCCCCACAACAACTCTTTACGATAGGATTAAATGTAATTACAGCACAAATATTGTAGGCAGACCATCAGCCATTAACTGGGAAACCGAAAAGCGATTGGCTGATGCAATTCGTATTATGGAGAAGTGGGGCTATGGCCTGTCAAGAAGCGAAGTACTGAATTTAGTTGCAgaatttgtaaaacaaaataagttgaAAACCACTTTTACAAACAATAGACCGGGAAAAGACTGGTTTATATCCTTTAGAAAAAAACATAACCTATCTATTAAGCAGCCTCAGCCGGTTGAATATGTCAGAAAACAAATGACGGACCCATTTGTAATTTCTGAATATTTTGAATTACTAGAAAACACCCTTACAACATTGAACCTTCATGAAAGCCCGCACTTAATTTGGAATTTGGACGAAACGTCTATGTCTCTGGATCCGACTAAAACCAAAGTGGTTGGCGCTATCAACAAAGCTTCTTCCAGGACCACATTTGGTACTGGAAAGGAAAACATAACCGTTCTGACGGCTGTAAGCGCTGCTGGCCGTAAAATATCTCCCTTAATTGTTTATAAGGGCAAAAACGTATGGGACACATGGATGGCAAAGGCTCTTGGTGATGAACGCCCAGTTTTGATAATTTATGACGGACACTCTACCCATGTGGATGTAAAAGTTATTGAATTGGCCGTTGAAAACAATGTAACTATCCTTAAACTGCCACCTCATACGTCCCACTTACTACAACCATTGGACGTGGCAGTTTTCAAATCTTTGAAAAGCAAATGGGATGCCAATTTAGTGGAATGGCAGCGCCATAATGTTGGTATCAAGATGCCAAAGAATATCTTTGCTGAAACTTTTGCTGCAACTTGGCAAGAAACCAATCCAGATATAATTAAAAGTGGTTTTAAAAAATCAGGAATATACCCATTTAACTCTCAAGTTATACCGGAAAAGAAATATGACCCCGCTGCctacaaaagatacaaaagaaaaaaaaaagagcaGCCAAAAATGCCGAAGTCTCTTAAACACGTATGCGTTGAAGTGATTAATAAAGCATTCGAAAATGTAGATCTAAAagcattttctcaaaaaataagtaatttagAGAAAGAGGTTGTATTTTTGTCTAATCTTAATAAAACAGATGTTCAAAATCAACGTTTTATAGCAAACCAGACATTTTGTCTTCCAAATTGTTTAGAGAGCAAACATACTCAAAGAAAAGAAaaggagaaaataaatataatttcggACCAAAAGATTAGTTTTGAAGAACTTTTGCTAGATAGGATACGTCAAGATAAGAAAGAAAAAGTGCTAAAAAAGAAGCGGGTAGCTTCAGGCGCAGAAGTCATTACTTTATCAATAGCTAAAAAACTTTTAGAAGAAAAGGAGgagaagaaaaaagaaaagaaaatgttatctcaaaaacaaaattttaaagcaAAAGGAAAACTGAAAGGGGAAAAATGTCTTTATCTTGCAAAACCTGGTCCATCAGGCAtagaaaaaaaagataagaagataaaatctaaaaacaaaagaaacacaAAACGAGTAGATTCAGACAACTCTTCAATGTCAGATATAATGAGTATTTACAGTGATAACGACTGCGTTGATTACGAgtatttggatgaaatttggaacgAAGAAGACGACGTTTTTGAAAGGGATAATCATAGTGAGCAGAAAATTCTGTCTAATATTGAAAATGATGAAAATGCTAATAGTAAAGAAGACTCTGTTATCaacttaaataaacaaaaaggaaAAGGCAAAGGCAAAAAAACAAAGACTGGAAAGGAAAATCAGTATTTAGAGAAAGATCTGCTTAAGTCAGAAAATGATAAGACTGATAGAGTGGACCGAGAAAATTGTCAGGTTACGGAGAATTATAAGACTGCTAAAAAAACTGATATTTACAACAAGACTGAAGTGGGCACCAAAgacaaaaaacaatataaaatgattaaaattaaGACTGAGAAAATAATGGATGATATTGATACAAACATGGAAATGGATAAGGGAGATGGTTGTGATATACATGAAGATTATGACATAAATGATTCCGTACTTGTGAGGTATTTTATCAGAAAGAAATGGGTCTATTACATTGGATTTGTTCAGGATAAGATAAAGAAAGAAGACACCAACTACTTTACTATAAATTTTCTCAAAACAATGAAAAAGACCCATGCACCACATCTGACGAAATGGCAAACAGAGTATCAAACGAGCAACTGGAGGAGTTGTTGGATTTCCCTTGCGGAACATCCTTCAATTGCAAAAGGAGTGGGGCTTGGAGCAAGGTCTAAAGAAGCAGTAGATAAACAGTGGAGTGACCTTGCTAATAAGCTCAATTCCTATGGCTCTGGATCAACTAAATCTGGAGAACGATGGAAAAAGTACTGGGCTGACTTGAAACACAAAAGCAAGACCGAGCTGGCTAAACGGAGGCAGGATGCTCTGGGTACAGGTGGTGATGCTAGTAGCCAAGATGATCTGTCCGAGGTTGACAAGAAAGTCTTGGCTATTATTGGGAAACAGGCTGTGTTATGGTGA
- Protein Sequence
- MPNKYTKKKKPLYTQEDINQALQEVKNNQLSMYAAAKKYRIPTTTLYDRIKCNYSTNIVGRPSAINWETEKRLADAIRIMEKWGYGLSRSEVLNLVAEFVKQNKLKTTFTNNRPGKDWFISFRKKHNLSIKQPQPVEYVRKQMTDPFVISEYFELLENTLTTLNLHESPHLIWNLDETSMSLDPTKTKVVGAINKASSRTTFGTGKENITVLTAVSAAGRKISPLIVYKGKNVWDTWMAKALGDERPVLIIYDGHSTHVDVKVIELAVENNVTILKLPPHTSHLLQPLDVAVFKSLKSKWDANLVEWQRHNVGIKMPKNIFAETFAATWQETNPDIIKSGFKKSGIYPFNSQVIPEKKYDPAAYKRYKRKKKEQPKMPKSLKHVCVEVINKAFENVDLKAFSQKISNLEKEVVFLSNLNKTDVQNQRFIANQTFCLPNCLESKHTQRKEKEKINIISDQKISFEELLLDRIRQDKKEKVLKKKRVASGAEVITLSIAKKLLEEKEEKKKEKKMLSQKQNFKAKGKLKGEKCLYLAKPGPSGIEKKDKKIKSKNKRNTKRVDSDNSSMSDIMSIYSDNDCVDYEYLDEIWNEEDDVFERDNHSEQKILSNIENDENANSKEDSVINLNKQKGKGKGKKTKTGKENQYLEKDLLKSENDKTDRVDRENCQVTENYKTAKKTDIYNKTEVGTKDKKQYKMIKIKTEKIMDDIDTNMEMDKGDGCDIHEDYDINDSVLVRYFIRKKWVYYIGFVQDKIKKEDTNYFTINFLKTMKKTHAPHLTKWQTEYQTSNWRSCWISLAEHPSIAKGVGLGARSKEAVDKQWSDLANKLNSYGSGSTKSGERWKKYWADLKHKSKTELAKRRQDALGTGGDASSQDDLSEVDKKVLAIIGKQAVLW*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -