Eelu020331.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ephestia elutella
Gene Symbol
clz9
Assembly
GCA_018467065.1
Location
CM031577.1:8673600-8680169[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-09 1.5e-06 29.4 0.0 2 43 339 380 338 381 0.94
2 2 1.3 1.3e+03 0.7 0.0 26 37 1083 1094 1081 1098 0.80

Sequence Information

Coding Sequence
ATGTACTCAATGGTCGAAACCGGCGACGAAGTCGAGTTCGCTCGACAGTCCCCTCCGACTCAAAATTATGCTCCACCTCCACCGTCGTCGCAAGAGGAAACAAGACCCAAgCGTAAACGATCAGCGCGTGCAACTCTGGCCCAATTAGAGACTATTGTGGCTAAAATAGAGGTTCAGCCCTTTTTAGCCACAAAAAGATTTGGCGGCATGTCGGGCCGTGAAAATTATGATCACGCCTGGAAGGAGGTCGCCAATGatctaaataaaatgaaaaatgggGCGTCTAACACTGCAGATCACGGGTTGCTTCAAGAGTATGAACCCATGATAATGGCTTTGGAACACTCGAGCATGGACATAACTACAGATATGGTAAAAACCAAACTTCTGCAAGACAAGCGATGGAAAGGGAACGCTGGTGGTAGCGATGGCTGCTTATTTACACGGAATCGTGGTAATGAAAAGGCCAGTTCCCGAGGCGAGAAGAAAAATGCCTCAAATACATCAAAACACGCTAGTACCTCGTCAAGTACGAACAAGTTGTGGTGTTGGAAGTGTCGTTCTAAAGGACATGTCAAGAAGGATTGTCCTCAATTGGACCGTAATGGAGCGACGTCGACTTCTATGGTGCTGTCTGCACTTAACACTGACAGTGATAGTTCGTGGATAATTGATTCTGGAGCGACAGATAATATGTCGGGATGCCAAGAATGGTTTCAAACTCTTAATGAGTCGCCGACTAAGGAGGTGTGTGTTGCTAATGGCAAGAAGCTAGAGAACTGTGATACTGGATCCACAACTGCAGCAGCAACAACAGAGATTCAGCTTGCTGCTGCAGCAGAAGATAATACATACCTTGTGATGATAGATATGTGGTTGGATCCAGTGGAAGGATCATCACAAGTGGTGCTGCACATCGGGAAAGGCCTACCAGTGCTGAGCAGGAACGGCAGGAAGAAATTCCTGCAACCCATGGTGcaACCAGAAGCAGAGAGTCAGGAAGGAGACCACAACGAAGAAGATATAAATCAAGCGCTTCAGGAAGTTACAAATAATCAATTGTCGATGTATGCTGCTGCAAAGAAGTATAGGATCCCCACAACAACTCTTTACGATAGGATTAAATGTAATTACAGCACAAATATTGTAGGCAGACCATCAGCCATTAACTGGGAAACCGAAAAGCGATTGGCTGATGCAATTCGTATTATGGAGAAGTGGGGCTGTGGCCTGTCAAGAAGCGAAGTACTGAATTTAGTTGCAgaatttgtaaaacaaaataagttgaAAACCCCTTTTACAAACAATAGACCGGGAAAAGACTGGTTTATATCCTCTAGAAAAAAACATAACCTATCTATTAAGCAGCCTCAGCCGGTTGAATATGTCAGAAAACAAATGACGGACCCATTTGTAATTTCTGAATATTTTGAATTACTAGAAAACACCCTTATAACATTGAACCTTCATGAAAGCCCGCACTTAATTTGGAATTTGGACGAAACGTCTATGTCTCTGAATCCGACTAAAACCAAAGTGGTTGGCGCTATCAACAAAGCTTCTTCCAGGACCACATTTGGTACTGGAAAGGAAAACATAACCGTTCTGACGGCTGTAAGCGCTGCTGGCCGTAAAATATCTCCCTTAATTGTTTATAAGGGTAAAAACGTATGGGACACATGGATGGCAAAGGgtaattatgattttgaattatcATATGCCGCCAGTAAAAAAGGATGGATGGAAACTGAAATCTTCTACAcatatatgcaaaatatacttaTACCAGCTCTTGGTGATGAACGCCCAGTTTTGATAATTTCTGACGGACACTCTACCCATGTGGATGTAAAAGTTATTGAATTGGCCGTTGAAAACAATGTAACTATCCTTAAACTGTCACCCCATACGTCCCACTTACTACAACCATTGGACGTGGCAGTTTTCAAATCTTTGAAAAGCAAATGGGATGCCAATTTAGTGGAATGGCAGCGCCATAATGTTGGTATCAAGATGCCAAAGAATATCTTTGCTGAAACTTTTGCTGCAACTTGGCAAGAAACCAATCCAGATATAATTAAAAGTGGTTTTAAAAAATCAGGAATATACACATTTAACTCTCAAGTTATACCGGAAGAGAAATATGACCCCGCTgcctacaaaaaatacaaagagaaaaaaaaagagcAGCCAAAAATGCCGAAGTCTCTTAAACAAGTATGCGTTGAAGTGATTAATAAAGCATTCGAAAATGTAGATCTAAAagcattttctcaaaaaataagtaatttagAGGAAGAGGTTGTATTTTGGTCTAATCTTAATAAAACAGATATTCAAAATCAACGTTTTATAGCAAACCCGACATTTTGTCTTCCAAATTGTTTAGAGAGCAAACATACTCAAAGAAAAGAAaaggagaaaataaatataatttcggACCAAAAGATTAGTTTTGAAGAACTTTTGCTAGATAGGATACGTCAAGATAAGAAAGAAAAAGTGCTAAAAAAGAAGCGGGTGGCTTCAGGCGCAGAAGTCATTACTTTATCAATAGCTAAAAAACTTTTAGAAGAAAAGGAGgagaagaaaaaagaaaagaaaatgttatctcaaaaacaaaattttaaagcaAAAGGAAAACTGAAAGGGAAAAAATGTCTTTATCTTGCAAAACCTGGTCCATCAGGCAtagaaaaaaaagataagaagataaaatctaaaaacaaaagaaacacaAAACGACTAGATTCAGACAACTCTTCAATGTCAGATATAATGAGTATTTACAGTGATAACGACTGCGTTGATTACGAgtatttggatgaaatttggaacgAAGAAGACGACGTTTTTGAAAGGGATAATCATAGTGAGCAGAAAATTATGTCTAATATTGAAAATGATGAAAATGCTAAAAGTAAAGAAGACTCTGTTATCaacttaaataaacaaaaaggaaAAGGCAAAGGCAAAAAAACAAAGACTGGAAAGGAAAATCAGTATTTAGAGAAAGAACTGCTTAAGTCAGAAAATGATAAGACTGATAGAGTGGACCGAGAAAATTGTCAGGTTACGGAGAATTATAAGACTGCTAAAAAAACTGATATTTACAACAAGACTGAAGTGGGCACCAAAgacaaaaaacaatataaaatgattaaaattaaGACTCAGAAAATAATGGATGATATTGATACAAACATGGAAATGGATAAGGGAGATGGTTGTGATATACATGAAGATTATGACATAAATGATTCCGTACTTGTGAGGTATTTTATCAGAAAGAAATGGGTCTATTACATTGGAATTGTTCAGGATAAGATAATGAAAGAAGACACCAACTACTTTACTATAAATTTtctcaaaacaataaaaaagacCCATGCACCACATCTGACGTTcgtgaaaacaaaaaaagaagaTAAAGATTTGTTACCacatattttaatagtaaagaaaattattttgaaaaaacatAATGATAAAGAATTTACTTTGatggatgataatgatgaagtATTTTTCACATAG
Protein Sequence
MYSMVETGDEVEFARQSPPTQNYAPPPPSSQEETRPKRKRSARATLAQLETIVAKIEVQPFLATKRFGGMSGRENYDHAWKEVANDLNKMKNGASNTADHGLLQEYEPMIMALEHSSMDITTDMVKTKLLQDKRWKGNAGGSDGCLFTRNRGNEKASSRGEKKNASNTSKHASTSSSTNKLWCWKCRSKGHVKKDCPQLDRNGATSTSMVLSALNTDSDSSWIIDSGATDNMSGCQEWFQTLNESPTKEVCVANGKKLENCDTGSTTAAATTEIQLAAAAEDNTYLVMIDMWLDPVEGSSQVVLHIGKGLPVLSRNGRKKFLQPMVQPEAESQEGDHNEEDINQALQEVTNNQLSMYAAAKKYRIPTTTLYDRIKCNYSTNIVGRPSAINWETEKRLADAIRIMEKWGCGLSRSEVLNLVAEFVKQNKLKTPFTNNRPGKDWFISSRKKHNLSIKQPQPVEYVRKQMTDPFVISEYFELLENTLITLNLHESPHLIWNLDETSMSLNPTKTKVVGAINKASSRTTFGTGKENITVLTAVSAAGRKISPLIVYKGKNVWDTWMAKGNYDFELSYAASKKGWMETEIFYTYMQNILIPALGDERPVLIISDGHSTHVDVKVIELAVENNVTILKLSPHTSHLLQPLDVAVFKSLKSKWDANLVEWQRHNVGIKMPKNIFAETFAATWQETNPDIIKSGFKKSGIYTFNSQVIPEEKYDPAAYKKYKEKKKEQPKMPKSLKQVCVEVINKAFENVDLKAFSQKISNLEEEVVFWSNLNKTDIQNQRFIANPTFCLPNCLESKHTQRKEKEKINIISDQKISFEELLLDRIRQDKKEKVLKKKRVASGAEVITLSIAKKLLEEKEEKKKEKKMLSQKQNFKAKGKLKGKKCLYLAKPGPSGIEKKDKKIKSKNKRNTKRLDSDNSSMSDIMSIYSDNDCVDYEYLDEIWNEEDDVFERDNHSEQKIMSNIENDENAKSKEDSVINLNKQKGKGKGKKTKTGKENQYLEKELLKSENDKTDRVDRENCQVTENYKTAKKTDIYNKTEVGTKDKKQYKMIKIKTQKIMDDIDTNMEMDKGDGCDIHEDYDINDSVLVRYFIRKKWVYYIGIVQDKIMKEDTNYFTINFLKTIKKTHAPHLTFVKTKKEDKDLLPHILIVKKIILKKHNDKEFTLMDDNDEVFFT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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