Eelu008967.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031570.1:3636386-3636877[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-12 3e-09 38.0 0.0 2 37 16 51 15 55 0.94 2 2 1.9 2e+03 0.1 0.0 14 23 137 146 131 148 0.74
Sequence Information
- Coding Sequence
- ATGGGTCGGCGCTACCAAAGAAAGACATCCAGAGGATCGTGGACAGCTGAAGCTCTAGATGAGGCGATGTCAAAGGTCTCCAGTAAAGAATTAGGAATCAACCAAGCCAGCAGGGAGTATGGCATTCCTAGTCGGACCCTAAGAAGACATCTTACATCAGGCAAATGTAAAGGGCCATTAGGTAGATGTCCGGAGCTAGGGGTCAAATATGAAAAGAAACTCGTCAGCCATATTCAAGCTCTTGAAAAGGTTGGATTTTCTCCTAACAAAGACGACGTTCAGAGTTTGGCTTATGCCTTAgctgaaaaaattaaattagaacATAGATTTTCACAAGAGAGAAAAAGAGCTGGTGATGACTGGTTCTATGCCTTTATGCGCCGTAATAAAGAAATTGTATTACGTAAGTCTGAAGGTTTGTCTTTAGCTCGTGCACAAGGAATGAACCGCAAAGATGTTGAAGATTACTTTAATGTGTTGAAACCTTATTGA
- Protein Sequence
- MGRRYQRKTSRGSWTAEALDEAMSKVSSKELGINQASREYGIPSRTLRRHLTSGKCKGPLGRCPELGVKYEKKLVSHIQALEKVGFSPNKDDVQSLAYALAEKIKLEHRFSQERKRAGDDWFYAFMRRNKEIVLRKSEGLSLARAQGMNRKDVEDYFNVLKPY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651665;
- 90% Identity
- -
- 80% Identity
- -