Eelu000191.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- lolal
- Assembly
- GCA_018467065.1
- Location
- CM031564.1:2602586-2609807[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-16 9.7e-13 49.1 0.0 1 42 321 363 321 366 0.94
Sequence Information
- Coding Sequence
- ATGTCACAGCAGTACAGCCTGCGGTGGAACAACCACCAGCCTAACTTCATATCCACATTTACTACCTTGCTGACCACCAGAACACTGGTGGACGTGACCCTCGCTGCTGAGGGCAAGCAGTTACAGGCTCACAAGATTGTCTTGTCCGCTTGTAGCACTTATTTCCAATCACTATTCGTGGACAACCCGTCGCGGCACCCCATCGTTATTTTGAAGGATGTCACCTTCGCAGACCTCCGCACCATGGTAGACTTCATGTATTATGGCGAAGTCAATGTCACTGAGGAACAGTTGCCACAGGTACTGGAGACGGCCAAGCTGTTAAAGATCAAAGGCCTGACAGAGATGCCGGACTCCACGTCGCTGACGCGTGCGCAGGGCTCCTCCGACTTCCAGCCCGGGGACTCCATCGACTCGCAGAGGCACTCCGCGTCGCCCGCGCACGACCACAATAACAAACGGAAGAGacgaaggaaaagtTCGTCCGGGTCGACGCCAGTGGAGCTGATTCCGGAAGACGGACGCGCCGACGAGTCCGCTCAGATGGACCTGGTCCGCGGGGACACCATCACGCTTAGCAGCCTGCCGCAGCAACGGCAGAGGCGGGACTTCGATGACAGGACCTTGGATAATACGCAACAGGCAACAGAGCCCCATAACCTAAACGTGGAGCCAATCCAAATGGACGCCAACCCCGCCGCCATGACACAAGGAGGTCAGTGGAGTATGATGGAGCACACGTACCCGCGGTATAACGCGTGCGTGGGCGCAGGCCTGCAGCAGGACTCCGGGATGTACATGAATAATGTGATGGGGGGTCACGTGACCGATATGAATGCGTACGGACAGACCCTGGGCGTGCCCGGCCCCTCGCCCGGGCCCAGCTGCGTGCCCGAACAGCAACAGACGCCCCAACAACAACAGATGATACAAAAACGAAGGCGGACCACAAACCCCCAGTCGGAAGAGAAATTCCAACGCGCGTTAGACGCCGTCCGCTTCGGCGGGATCGGATTCTGCAAAGCGGCTCGCCTTTTCGGCGTGAATAACCGAACGCTTTGGCTAGAGTATAAGAAAAAGGGATACCCTAACAACCGACCGAGCATCCGCAGTCGAATCAAGCGAGAACACGCCACTCCGCCTCTAGAACACAAGGATGATAACCAGCAACCAGAGCAGCAAATGGCGCTGCTCTGCCCCCCGCATCCGGTTCCGGTCGGGTTCATCGACAGCCGCCCGTTAGACTTCCCCCTCCAGGGGGTGCCGCACAACTCCCCCCTGAACATTTTAGGGGTTAACTTCAACTCGATACAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISTFTTLLTTRTLVDVTLAAEGKQLQAHKIVLSACSTYFQSLFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLETAKLLKIKGLTEMPDSTSLTRAQGSSDFQPGDSIDSQRHSASPAHDHNNKRKRRRKSSSGSTPVELIPEDGRADESAQMDLVRGDTITLSSLPQQRQRRDFDDRTLDNTQQATEPHNLNVEPIQMDANPAAMTQGGQWSMMEHTYPRYNACVGAGLQQDSGMYMNNVMGGHVTDMNAYGQTLGVPGPSPGPSCVPEQQQTPQQQQMIQKRRRTTNPQSEEKFQRALDAVRFGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIRSRIKREHATPPLEHKDDNQQPEQQMALLCPPHPVPVGFIDSRPLDFPLQGVPHNSPLNILGVNFNSIQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640201;
- 90% Identity
- iTF_00651874; iTF_00640201; iTF_01302217; iTF_01302515; iTF_00072948; iTF_00072662; iTF_00640536; iTF_00720473; iTF_00720143; iTF_00011867; iTF_00012132; iTF_00012864; iTF_00013198;
- 80% Identity
- iTF_00651874;