Edan011862.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- nfxl1
- Assembly
- GCA_000507165.2
- Location
- KZ497597.1:960310-968471[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00023 4.2 7.5 6.9 9 18 388 397 387 398 0.93 2 10 1.4e-10 2.6e-06 27.3 13.6 1 19 407 425 407 425 0.99 3 10 0.29 5.2e+03 -2.4 1.2 5 10 453 458 453 458 0.92 4 10 8.2e-05 1.5 8.9 11.1 9 19 473 483 471 483 0.91 5 10 0.0037 67 3.7 8.7 3 12 494 503 486 503 0.79 6 10 0.32 5.7e+03 -2.5 3.0 14 18 534 538 534 539 0.90 7 10 1 1.8e+04 -5.5 3.2 6 10 568 572 565 572 0.83 8 10 0.00013 2.4 8.3 14.4 3 19 581 597 580 597 0.92 9 10 1 1.8e+04 -5.3 1.9 9 13 603 607 602 607 0.72 10 10 2.7e-07 0.0048 16.9 12.3 1 16 647 661 647 667 0.92
Sequence Information
- Coding Sequence
- ATGGAGCCTGATCGTGGCAAGAATAAACCTAAAAATGCTTGGAACGTTCCAAATCCTAAGGTAAATCCAAGCTCTGGATCAAAGCCCCGTGGACAAGCTACAGGACAACATAgcaaagagaaagagagagcagAGGCTGAGAGACGCTTTCAAGCAGCTAAAGCAAAATTGGAACAGTCAGTCCATAAACACCTTAGTGCAGAGCAAGACGCTAATTCTTCAGATGAAGAGGACCTTCAGAGTGAAAATATATTAGGGTCTGTATTGCAATCCTATACCAAGTCAGCAGGTGGATTGGTAGATTTAGGGCGTACTCAACAATTCTTAGAAGACGCATTCCAGTCTGGAGCAGCCACTTGCTTAATTTGTATATCCTCTGTAAAGAGAGCTGATGCTATATGGAGTTGTGAAAAGTGCTACTGTTTCTTCCATTTACCATGTATACAAAGATGGGCTGCTGACTCTGTTGCTCAACAAAAACGCTCTATAGAAGATTTAGCTCCATATGATAAGCCCCCAGAACTCTTTTGGGGCTGGAATATGAACCGAGTGAAACACCACAACGATACATCTGCTTCTGTGGACAAGTGGAGGATCCACCTTTTCATCTATGGCTGGTACCTCATTCATGTGGCGAGACTTGCGGCAAGCCTCTGCTACCAAAATGTGGCCACAAGTGTTTGCTGCTTTGTCATCCAGGTCCCTGTCCACCATGTCCACAAATGGTCCGTTGCAGTTGCCATTGTGGGAAGAGCACAGCTCAGCAACGAAGATGTTCGGATCAAAAATGGTCTTGTGGAACAAGTTGCAAGAAAGCTCTTGGTTGTGCCAAGCACTTCTGTTCAGAAATTTGTCATGACGGCCCATGCCAGCCTTGCCCTCGCACCAGTAAACAGCATTGTGCATGCAGGGCTCAAGTCAGGGAGCAACCTTGTGCTTTGCCTGCCTGGCAGTGTGGAACTGTTTGTGGACGTCGCTTGTCATGCGGTCACCACACATGTGCAAAAGTATGCCATCCAGCAGGAGAGTGTGGAAACTGTCCTCTCTCAGAATCGCGCACTTGTCCCTGTGGGAAGGTCTCCCATCCAAGTCTGCCTTGCACCTCTGATGCCCCTACGTGTGGAGACACTTGTGGCAAGATGCTGGCCTGTGGCGCCCATACTTTGCTGTGATGGACAATGTCCACCTTGTGAAAAGATCTGTGGCAAAATGCTGGGTTGTGGAAAGCACAAATGCAATGCCATTTGTCACACTGGGCCCTGCTATCCTTGTCCTCTGACAGAAATCTTGGCCTGTCCTTGTGGCGACACCAGACTGGTACTGCCATGTGGCAGGAGGAAACACTTGAAACCACCAAAATGCAACAAACCATGCAGGGTTCCTACTGAATGCCATCATCCTTCAAGAGTGCCTCATAAGTGTCACCCTGGTGATTGTCCTCCCTGTAAGCAAACTTGTGGCAAAGTCCATGTATCTTGTAAGCACACCTGTCCAGCTCCCTGCCATTCAGCAGTATGGGTGACTACAGTTCTCAATGCAGATAAGCCTTTGGCAGGTCCTTGGGAAAAGAGAGAAACTATACAAGAGATGAAAGACCTACCTTGCCCAAGTTGTATGGTCATGAGACAGCGGACTGGCCATGTCATCAAGGTGTCCCTAGTTCGTGTGGACGTCCCTGTGGCTGGCGAGAACTGCAGTGTTTGTGAATCCACGTGTACTCTGCCTCGGCCTCAAGGATGCACTCACACCTGTCTGTCTGCCTGTCACCCCAGTCCTTGCAAGCCTTGTCAACAAGCAGTCAAGTTGAAGTGCCACTGCGGACTGAATCAGTTGCACCGTCCATGTGTGCAGTGGACCAAAGCTCAGTCAGTGGAGGACTCCAAACAAGAGATAGAAAAATTGCTCAGCTGTGGTAACCAGTGTCCTAAAAATCATGACTGTGGTCATCGGTGCAGAGAGGTTTGTCACTCTGGGGAGTGTCCTGATCCTCAGTTGTGCCAGCGCAAAGTGAAAGTAACTTGTCCATGTAAGCGACTCCGCAAGGAGTTCACATGCGAGGCTGTCCGCTCCAACAAAGCTGAGGTGTCTTGCGATGATGTTTGCAGAGCCAAGCAGAGAGAAGACAAATTGTTGAGGGAACAACAGGAGCAGCAACATCGGCAGGAGCTGGAGCGCAAGGAACAAGAAGAGTTGGAGAAATTTGAGAAGTGGCAACAAGGCAAGAAGAAACACCGAGAGAGACGAAGACGTTTCAGTGATACCAATGAGCCAACGCTTTGGCAAAAATATGGGAAAATTTGTATTGCAGTAGTTGCATTGGCACTGGTTTTAGGTTTTGCATACAACATTATATCAGAttaa
- Protein Sequence
- MEPDRGKNKPKNAWNVPNPKVNPSSGSKPRGQATGQHSKEKERAEAERRFQAAKAKLEQSVHKHLSAEQDANSSDEEDLQSENILGSVLQSYTKSAGGLVDLGRTQQFLEDAFQSGAATCLICISSVKRADAIWSCEKCYCFFHLPCIQRWAADSVAQQKRSIEDLAPYDKPPELFWGWNMNRVKHHNDTSASVDKWRIHLFIYGWYLIHVARLAASLCYQNVATSVCCFVIQVPVHHVHKWSVAVAIVGRAQLSNEDVRIKNGLVEQVARKLLVVPSTSVQKFVMTAHASLALAPVNSIVHAGLKSGSNLVLCLPGSVELFVDVACHAVTTHVQKYAIQQESVETVLSQNRALVPVGRSPIQVCLAPLMPLRVETLVARCWPVAPILCCDGQCPPCEKICGKMLGCGKHKCNAICHTGPCYPCPLTEILACPCGDTRLVLPCGRRKHLKPPKCNKPCRVPTECHHPSRVPHKCHPGDCPPCKQTCGKVHVSCKHTCPAPCHSAVWVTTVLNADKPLAGPWEKRETIQEMKDLPCPSCMVMRQRTGHVIKVSLVRVDVPVAGENCSVCESTCTLPRPQGCTHTCLSACHPSPCKPCQQAVKLKCHCGLNQLHRPCVQWTKAQSVEDSKQEIEKLLSCGNQCPKNHDCGHRCREVCHSGECPDPQLCQRKVKVTCPCKRLRKEFTCEAVRSNKAEVSCDDVCRAKQREDKLLREQQEQQHRQELERKEQEELEKFEKWQQGKKKHRERRRRFSDTNEPTLWQKYGKICIAVVALALVLGFAYNIISD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -