Edan012114.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- pnr
- Assembly
- GCA_000507165.2
- Location
- KZ497641.1:504-15743[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 10 1.8e+04 -5.7 3.4 20 26 12 18 10 18 0.78 2 2 1.2e-17 2.2e-14 52.8 3.6 1 35 377 410 377 411 0.98
Sequence Information
- Coding Sequence
- ATGTGTAGTATAccatcaaaattttatgaattatgtCGACTATGTTTATCTTGTGATGGAGTAAAACTGTCTATATTCGATGGCGAAGGCTCGCAGCGCAACTttccattgaaaataatgacGTGTCTATCTATCTTGgtcaatgAACAAGACCTGCTGCCATCCTTGATTTGTCATCGCTGCGTTTACAAACTTGACGTGCTCTATGATTTCCGAGAGGTTTCTAGGAAGTCTGATATCATCCTCAAGCAATATCTCAACTATACACAGCAATTTTCACATGTCTCACAGGAAGGGGACCAGCCAGATGTGAGTTCTGGAGGGGAAGAGGACGAGGGCATAGAAGGGGAAGCTCTGAGCTACGTCAAGGTGGAGAGCGCGGGCGAGCCTGAGCTCAGCGATGGCGAGGGCAGGAGGAGCAGACACGATGAAGAGGAGGACGACGACGAAGAACGAACTGCCATGGAGGAATGCGAGTCTGGACCTGAGGACGCAGACAACGAAGGGGCACTGCAAATAGTCTCGGGCAGCGAACACGACGACGACGAGGTTTCCAACACAAATAGCTCACAAGATGAACAGCGCCGACTGTCCCGTCCATGTTCTGACGACCGAAATAGAGAATCAGGAGAGCCTGATAGTGCCTCAGAAGCTGCCTTGAGAGCAGAAAAAATTACTAAGGAGTTCCAGAGAAATCCTACTTGGCTGCAGGATTTAAGATCCTACTTGCCGGGAAGTCGAGGAACAAGCAATGAAGACTTAAGCTCTGAGTCCAACAACCCTCAGCCTTGTGACTTACGTACTTTCATTTCGCGGTCCCACCTCAGCTCAAGCTCTTCCTCAATCTCACGTCCTGCCACGAGCTCTGGGCTTGAGGTGCGCAGAGCAGACGGCACACTGCTGGCTCCTCAAGCCACCATGTCCGTGGCTGAGATCCTTGCCCTGCATGCCTCACGCAACCAGCAGAGAAACGCCAAAGCCACTACCGAGGCCAACCCTGAGCCTTCAGATGCCTTAAGTCACATCCAAACAGAGCCACACTTCCTGGCACAGCTGGCAACTCCTCGCGCTCCACCTTGGAATCCATTTAAGAAGCAGCCGAGTCTTGCCAAACGTGTTGACCTTTGTTGTACCAACTGTGGAACCAAAACCACCACAATTTGGCGACGCAATGCTGATGGTGATATGGTGTGCAATGCTTGCGGCCTCTACTTTAAGCTTCATGGAGTCAACCGGCCAGTAACAATGCGGCGAGACACGATTCATACCCGCAGGCGACGTCCCAAGAGGCAACGCACTCGTGGTGGAGCCGCCCCTAACAGTATCGAGAACAATGGCTTGGCAGCCACTGCGAGTCCTCCTGATGCTGAGGAGGCCACACAGTCAGCTATGAAGGGTGTCTCCTACCTCCCCATCTTGCCTAAGCCGGTACAAGAGTCAGCAGGATCTCCAGCAGAGAGCTCAGCCGCAGCCCTCGCCCTCGTCACCGTCAAGACGGAGCTGCAGTCAGAGGAAGAGGAGCTGCGTGCAGCAGGAGAGGCAGACGAGGGTCCTCTCAACTTAGCGAGCACCACTTCCCCTCTGTGA
- Protein Sequence
- MCSIPSKFYELCRLCLSCDGVKLSIFDGEGSQRNFPLKIMTCLSILVNEQDLLPSLICHRCVYKLDVLYDFREVSRKSDIILKQYLNYTQQFSHVSQEGDQPDVSSGGEEDEGIEGEALSYVKVESAGEPELSDGEGRRSRHDEEEDDDEERTAMEECESGPEDADNEGALQIVSGSEHDDDEVSNTNSSQDEQRRLSRPCSDDRNRESGEPDSASEAALRAEKITKEFQRNPTWLQDLRSYLPGSRGTSNEDLSSESNNPQPCDLRTFISRSHLSSSSSSISRPATSSGLEVRRADGTLLAPQATMSVAEILALHASRNQQRNAKATTEANPEPSDALSHIQTEPHFLAQLATPRAPPWNPFKKQPSLAKRVDLCCTNCGTKTTTIWRRNADGDMVCNACGLYFKLHGVNRPVTMRRDTIHTRRRRPKRQRTRGGAAPNSIENNGLAATASPPDAEEATQSAMKGVSYLPILPKPVQESAGSPAESSAAALALVTVKTELQSEEEELRAAGEADEGPLNLASTTSPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -