Edan002281.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- pnr
- Assembly
- GCA_000507165.2
- Location
- KZ498195.1:57852-76486[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 5.6e+03 -3.0 0.0 10 18 49 57 46 59 0.79 2 3 2.4e-17 4.3e-14 51.8 4.4 1 34 432 464 432 466 0.97 3 3 1.8e-18 3.3e-15 55.4 6.7 1 35 489 522 489 523 0.97
Sequence Information
- Coding Sequence
- ATGGATTGCGGTACCGGAAACCCAACACCTGAAGACACTTCCGGCGGCGTGACTGCAGACTCCGTGGAGAACGAAACCAACAAAATTCTAACTGCACCATCAGAAAACCACGAGGACCATGAAGGAGAATCAGGCGAGACCATCACATTATGGAAAGCAGACCCAGATAGCAGTGACAAAACAGAGACCATTTTAGCCACATCTGCGATAGAAACAAACGATCAAACACCAAATTCACCTCAAACTGTAATTACCTCAACTGCTTCGCGACATAGAAACGTGATTCGTGCTGTCGTCGTTGAAGACGATGGACATCAGTCTCCTGCAAGGCAATTCCACAACAATTACACTCCACCGTTACAGCAGAACAATGGAGAACTGGAGGACCATGGACAGCCTGTATATCAGAATCAACAAGTGTACAGCACACCAAATCCTTCCCCACCCTCGCAAAGTTACCATCTAGAACAACAGGGTCAACATATGAGTCCGTACATGCACAACGTGGAGCAACCACCAGCTCAGACAGGCACCCCTCCCCATTCATCCGGTGTTGTAGTACAGAACATGCACCACATCCAACCTCCACCACTACTCACATACGAAGCCCTCAAGTATGAGGAAGAGCATCTACAGAGTGGTGCTCCTAGTCCCCCGTCACAACAAACAACCCTACTGAGCAACAACACTTATGCTACTCTAGAGCCAGTACATCTACAACCACCCTCATATTCCCCACCTAATGGTAGTCAATATATCAACGCACCAGTTACCACCAATCCAAGTTATTACTTCAGTTATGGTAAATCATCTAATGATCCTGTTTACGTGAAAGCTGATCTCAATCTAAGCTCGTCAACATCCAAACTATTGCATCCTCAATACGATCCACCTCTGGTCTATGAAGATTCACCACAATATTCAACATACAACACTCGTTCCATCACGGACAGTTATTGGTTACCAAACAACGGATCTACCATGGTGGATTATGGTGCCACTTCTACCCCTCCAGGTGTAGGAGGATATACTACGGGAGGATCGTCACATCATCACTCCCATCACCTCACGTTGGCCTCGCAATCGTTGACTTTACCGGGTGAGGCGACCTTGGAAATGCGACCTCCCAGTGTGACAGGCACGGGAGGATGTGGGACAACAAATAATTTCACTGGACACATGACTGGACAGCCTGGCACTGGACACTCCACGCATCAATGGATTAATACAGGAACCATTCATGAGCAGGATCTCTACGATCCAGCTGAAGCCGCGATGATGGAAGGTAAAGAATGCGTGAACTGCGGTGCCAGTAACACCCCACTGTGGCGTCGTGATGACACGGGGCACTATTTGTGCAACGCTTGTGGTCTCTACACTAAGATGAACGGCATGAATCGTCCCCCAGCCAGACAGCAGCAGAAAAAGTCCTCAgggaCTGGAAGTCGACGCACGGGTGTGACTTGTGCCAACTGTAACACCACCACGACGACACTTTGGCGTCGTAACAACAGTGGAGAACCCGTCTGCAACGCTTGTGGCCTTTACTTCAAACTGCACAACGTAAATCGGCCTTTGAGTATGAAGAAAGAAGGTATACAGACGCGTAAACGGAAACCTAAGAGCGGTGGTAGTTCTGGAGTGGGCTCGAGCAAAGGAGATTCGAGACATTCTGCGCACCACGCCGGATGTGAGTGTCCCAGCTGTATCTGa
- Protein Sequence
- MDCGTGNPTPEDTSGGVTADSVENETNKILTAPSENHEDHEGESGETITLWKADPDSSDKTETILATSAIETNDQTPNSPQTVITSTASRHRNVIRAVVVEDDGHQSPARQFHNNYTPPLQQNNGELEDHGQPVYQNQQVYSTPNPSPPSQSYHLEQQGQHMSPYMHNVEQPPAQTGTPPHSSGVVVQNMHHIQPPPLLTYEALKYEEEHLQSGAPSPPSQQTTLLSNNTYATLEPVHLQPPSYSPPNGSQYINAPVTTNPSYYFSYGKSSNDPVYVKADLNLSSSTSKLLHPQYDPPLVYEDSPQYSTYNTRSITDSYWLPNNGSTMVDYGATSTPPGVGGYTTGGSSHHHSHHLTLASQSLTLPGEATLEMRPPSVTGTGGCGTTNNFTGHMTGQPGTGHSTHQWINTGTIHEQDLYDPAEAAMMEGKECVNCGASNTPLWRRDDTGHYLCNACGLYTKMNGMNRPPARQQQKKSSGTGSRRTGVTCANCNTTTTTLWRRNNSGEPVCNACGLYFKLHNVNRPLSMKKEGIQTRKRKPKSGGSSGVGSSKGDSRHSAHHAGCECPSCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -