Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ498061.1:143387-155974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.48 32 5.2 0.2 2 23 423 444 422 444 0.89

2 9 4.9 3.3e+02 2.1 2.3 3 23 458 478 457 478 0.86

3 9 0.00024 0.016 15.6 1.8 1 23 541 566 541 566 0.93

4 9 0.14 9.1 7.0 1.1 2 23 637 659 636 659 0.96

5 9 0.0093 0.63 10.6 0.2 1 23 665 688 665 688 0.94

6 9 0.00049 0.033 14.6 0.2 2 23 694 714 693 714 0.95

7 9 0.009 0.61 10.7 0.1 2 23 735 757 734 757 0.94

8 9 0.39 26 5.5 1.9 1 23 767 790 767 790 0.89

9 9 1.8 1.2e+02 3.5 0.3 2 23 795 815 794 815 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.48	32	5.2	0.2	2	23	423	444	422	444	0.89
2	9	4.9	3.3e+02	2.1	2.3	3	23	458	478	457	478	0.86
3	9	0.00024	0.016	15.6	1.8	1	23	541	566	541	566	0.93
4	9	0.14	9.1	7.0	1.1	2	23	637	659	636	659	0.96
5	9	0.0093	0.63	10.6	0.2	1	23	665	688	665	688	0.94
6	9	0.00049	0.033	14.6	0.2	2	23	694	714	693	714	0.95
7	9	0.009	0.61	10.7	0.1	2	23	735	757	734	757	0.94
8	9	0.39	26	5.5	1.9	1	23	767	790	767	790	0.89
9	9	1.8	1.2e+02	3.5	0.3	2	23	795	815	794	815	0.71

Sequence Information

Coding Sequence: atgatctttcatttggctatctcagattttttcaccggggttctccattatgttcATTATGCTGACTCTTGTTGTTTTATTATCATTGAAGATAACGAGGCGCAAGTGGCAAGTGATACCAATGTCAGTGACGAAGCTGTTAGTGAGCAAGTAGATGTAGAACCTGAAGCTGAGAGACCAGTGTTGATACCCGAATGCTTTCAGACCATGGCAACATCCAGATTTgGTTATAATAAACAGGGTGAGATGCTAGGACGTTCGAAGAACTCGGCTGTTCCAAGTGTTCGCAATGTAGGAAACACTTGGTCTCATACCGATATTGCATCACAGTCACCTCTCCATCTTCAGGATCAGATTTTGGACACTACTGACGACATGGACAGTTTTTACTCTCGATGTCTGCTGTGCACTTGCAGACCCGATGCAACTCcacatgtaaaaattttctctGACGCCGGCAATGAACTGAAACTAGCTGAGAAACTCAACATATACCTTAACATTCAGATTGAGCCTGAGCTGCCACAGAGGGTGTGTCAAAGTTGCTTGGAGAAATTAGAGGTGACCAATGAACTGGCACTGTGCAGTCAACGAGCGAGGATTATATTGCTGCAGATCAAGCAACACGGTGAAAATTTTGACTCTGAGGTGGAGCCAGATATCAACTTTTCAGAGAATGAACCTGAATTGGACTCTTACCTACCAGCCATGGACTCTCCTACCATTAACAAGAAACATACCATAGACATCAGACCCAATGTAATACCTATTGATCAGGAAGAATCGTACTTTCCAATGGAACAGGAAGATTCGAACTCCAACATTTCAGCCGAGGACCAACCAACAAATGAGGTTGAGGAACCGACACGCATTACAATTAATGAATCTACCAACAAATCTGCTGTAGCAGAGAAACCAGGGCTGTTTGGATGCGTAGGGGACTTAGCAGAGGATGGCCCAGGCCCAGCCGATGAGGACTTCATCAAATGTTCTGAATGCTCCCAGACCATCTTTAAAGGCTACATGGATTTCCACGTGAAAACACACCATGGACAATTAATGCCAATATCATCATCAGTTGTCAGAAAACCCTTTCAGCGTAGAGCGGGATTCACAAGAGAGGCTCTATTGGACGTGATAGAGTGCAGCTTCTGCCAGTTGAAACTCAGTAGTCAAGTGATGGACCTCCACGTGTCCCTGCGACACACAAGGAAAACTTATCAGAAGACACCAGAAATGCAAGAAAAAGGCCTGAATCGCTTGATACAGTGTCCTTCATGCCCCTGTATGTTCTACCCTGAAAGTATGCAAGAACACATTGCAGACAATCATCCACCAAAACACAACCCAGACCTGGAAAAGATAAGAATGTGTTCCTATTGTGGCAGGAAGATAAGATACTGTGACATGGATCAGCACATAAAATCCAATCATGGTGTCAATGCATGGAGAAAATGTATACATTGTAAGAAACGAGTCAGGAACACTGATACTGACATTGAAGCACACTTGTTCCAAGAACATCATGGTGGTAGATTGTTGGCTTGTATAAAATGCGATGAAAGATATGCAAAGACTGGGGAAGAACAGGCACACATGCAAACTTTTCTCAGCTGCAAGTATAAATGTCCTCTCCAGACTTGCAGTAAAACCTTTGTAACATCGTCATCATTTAAGGATCATGTTCTTTTCTTTCATCCTAAAATTGAGGAGGAATTGCAAGATGAAATCAATAGAGAGATTTACGAAATTTTTAGAGTTGATAAAGATACAGATAAAATCCAGGATGAAGAAAAATCTGAAGATGTTGACATACAAATAGAAGAAATTTCTGATCAGAAGAACATTCCTCCAGAAAAACCACTCCCAATGTTTGGAACCAGACGTAATAATTATGGTGGTCCTGTGAAGTGTGACATCTGTGAGAACTTGGTGAGACATAAATGGTACTTGATCAAGCACAAAAACAAAGTCCACAATATGAACTTAACCTACGATTGTGTGGAGTGTGGAAAGAAGTATCCAACTgtggataaaatatttaaccatCTGAAAGGTATGCACGTGGAAAAGAATAAAGTGTGTGATATTTGTGGTAAAGCATTCACAAAGGCAAGATACTGGGCACACATGAAATGGCATGAACGTTTTCCAAATGGGCCACCACAACGTAACTTTTTAGACAGACCACTTGACCCAGTACGTTGTGGTATGTGCAATCGTCCAGCAAGAAGCAAGTATGCTCTGTTGACTCACATCAATGCTGAACATCTCGATGTGGTGAAGGAACGTTTGCCTTTCCATTGTGAACCGTGTGACAGAGAGTTTGCAAACTTCGAATATTtaatgcaacataattatagtaaacaTTTGCCCAAGATAGTGTGCACCTATTGTGGTAAACTTATTACCCAGAACAGAATGTCCATGCACCTTAAAATACATGAACCAGATAGAGGTTCTGACTACAAGGGTAAGAAAAGAGGTAGAAAACCTTCCAAAGCAGTCAAATGA
Protein Sequence: MIFHLAISDFFTGVLHYVHYADSCCFIIIEDNEAQVASDTNVSDEAVSEQVDVEPEAERPVLIPECFQTMATSRFGYNKQGEMLGRSKNSAVPSVRNVGNTWSHTDIASQSPLHLQDQILDTTDDMDSFYSRCLLCTCRPDATPHVKIFSDAGNELKLAEKLNIYLNIQIEPELPQRVCQSCLEKLEVTNELALCSQRARIILLQIKQHGENFDSEVEPDINFSENEPELDSYLPAMDSPTINKKHTIDIRPNVIPIDQEESYFPMEQEDSNSNISAEDQPTNEVEEPTRITINESTNKSAVAEKPGLFGCVGDLAEDGPGPADEDFIKCSECSQTIFKGYMDFHVKTHHGQLMPISSSVVRKPFQRRAGFTREALLDVIECSFCQLKLSSQVMDLHVSLRHTRKTYQKTPEMQEKGLNRLIQCPSCPCMFYPESMQEHIADNHPPKHNPDLEKIRMCSYCGRKIRYCDMDQHIKSNHGVNAWRKCIHCKKRVRNTDTDIEAHLFQEHHGGRLLACIKCDERYAKTGEEQAHMQTFLSCKYKCPLQTCSKTFVTSSSFKDHVLFFHPKIEEELQDEINREIYEIFRVDKDTDKIQDEEKSEDVDIQIEEISDQKNIPPEKPLPMFGTRRNNYGGPVKCDICENLVRHKWYLIKHKNKVHNMNLTYDCVECGKKYPTVDKIFNHLKGMHVEKNKVCDICGKAFTKARYWAHMKWHERFPNGPPQRNFLDRPLDPVRCGMCNRPARSKYALLTHINAEHLDVVKERLPFHCEPCDREFANFEYLMQHNYSKHLPKIVCTYCGKLITQNRMSMHLKIHEPDRGSDYKGKKRGRKPSKAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -