Edan000334.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- -
- Assembly
- GCA_000507165.2
- Location
- KZ497813.1:44557-59703[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.3 2.9e+02 2.2 0.3 1 9 32 40 32 42 0.91 2 13 0.0044 0.3 11.7 0.5 2 23 1142 1163 1141 1163 0.96 3 13 0.00011 0.0072 16.7 0.2 1 23 1194 1217 1194 1217 0.97 4 13 0.014 0.97 10.0 4.1 1 23 1223 1246 1223 1246 0.96 5 13 0.0037 0.25 11.9 0.8 1 23 1252 1275 1252 1275 0.89 6 13 0.0065 0.44 11.1 4.1 1 23 1283 1306 1283 1306 0.96 7 13 8.3 5.6e+02 1.3 6.0 3 23 1341 1362 1339 1362 0.92 8 13 0.13 8.9 7.0 4.7 2 23 1372 1394 1371 1394 0.90 9 13 2.4 1.6e+02 3.1 2.4 2 23 1411 1433 1410 1433 0.89 10 13 0.28 19 6.0 1.7 3 23 1439 1459 1437 1459 0.96 11 13 0.17 12 6.6 0.0 1 23 1481 1504 1481 1504 0.88 12 13 5.2 3.5e+02 2.0 0.5 1 23 1510 1532 1510 1532 0.91 13 13 3.8e-06 0.00026 21.3 1.1 2 23 1540 1561 1540 1561 0.97
Sequence Information
- Coding Sequence
- ATGGCCGCTGTAGATGCGGCTGAGTCGCGAGGAGACACAGACAGTAGTTCggaagaagaagaggaggaggaagacGAGAAGATGCTAAAATCTCATCAGTGCCGGATTTGCGGCAAAGTCGGCGACAAAGGGATTCCGATGCTGTTGCCGCAGCGAGACAAGCTCAGAGAATGGATCAGAAAATATCTCAGCGTGGAGACAATACAAGACTGGATCACGTTTCATGCACAATGCCAGAAAACACAGAGACTTAACTTCCCTGTGCCTAAGAATGCAGATGCTGTTGACCCTCTTGCTGTACAGCCTGCTCCTGTACAGCCTGCTCCTGTACAGCCTGCTCCTGTACAGCCTGTTCCTGTACAGCCTCCACACGTGAATGGTGATGCTGCAAAGTCAAAACAGCCGGAACAGCCCTCACCTGTCCAGGGCGAACAGCCTGATGCTGAAAAGGCAGTGAAGTCCAAACAGCCTGAAAAACCTGCCGCTGTACAGCCTGAACAGCATTCCTCTGCAAAGTACAAAAAGCCAGAAAAACCTCGTGAACAGCCTTGCTCTGAGAAATCAAAGCAGTCTGAACAGCCTTCGTCTGATAAATTTGAACAGCCTTCCTCTGCAAAGCATAAACAGGCACCAGTTGAAAAACCCACTGCCACCCCTGATTCTTCTGACAACGAAGTTGTTTCCAACTCTGAGGATGAAATGTCACCACCGAAGCAGCAAGTGGCTTCAGATTCAGACAGTCCAGTAGTTAAACGCACCAACAGGAACAGAATTATCTCGTCAAGCGAGGAGGACAGTCCCAACAAATCCAAACCTATCAAGAACGTCAACTTGTCCTTGACTGCAAGGACTCGTCTGAACAAACGGCCAGTGTCCCCCGACGAAACAGTCCCTAGCAAGAAGTTTGCAGGAGATCTGAGACTCAGTGGGCCCGTGATACAGCTGAAGAGGCTGGAATTGGACGTAAATTCCTCGCCCATCATCCTCAGTCCAAGCTCGTCGAGTTCTACGATTGCTGCCCCCTCTCCTGCAATAATGAGGAGACCAACGAGTTCCACCAAGAAGCGGAAACGAAGAAGTTGGTCTAACAAATCGTCGTCTGGCGAGTCTGAAAGTTCAGGACCTGCGACTACCAACAATGCGGCGAGACCAGCAGAGAACACTTCACTTTTACGTGGTTCAAACTTCTCTCATCCCTCTGCTGTCGCCCCACCGACAACTGTCCCTGTCGCTCCTCCTACAGCCGTCATCTCCCCAGTCATATCTCAACCCAGCCCTGTGCACAATGCTCCCAGAATGGCCGGAAGTCCATCGACAAACAACAACGGTCCACAGATCCTCAACAGTTTTAGTCTGGCACAGCCGACGGTGCAACCACCTGTTCGACACTTCATTGTTACCACCAATCAGTTTCAGGAACCTACTGTGCATCAGGTCATTGCCCCCTCTCAGGTCAGGAATCAGCAGCAAGCAACTGTGGCTACAACACAATTGGCTCAAAATCAACAGCAAATGAGACCTGTGGTTCAAGCAACAGTACCAACAACTCAGTTAGCTCCAAATCAACAGCAAGCAAGACCTGTGCCTCAAGCAACAGTGCCAACAACTCAGTTAGCTCCAAATAAACAACAAACAAGACCTGTGGCTCAAGCAGCTGTATCTACAAGCCAATTGGCTCAAAATGAGACTAGACCTGCAACTCAAAACCAACAGCCAACAAGACCTGTGTCTCAAACAACTCAGAACCAGCAGCCAGCTCAGGTGACAAATGTGTCTGCCAGAGACCAGGCAACACCTTCAAAAAGCATCAAGAATGTTGACTATGAGACAGCACTGAGCATCAGAAATCACCCCAAGTTCAACATCTTAACTGCGGAACACAAAGCCAAAGTGATGGAAGTTTTGGCCAACCCTCCCAAGGTTTCCCAGCAATCACCTGAAGTTATAGATCTGGACGATGATGACCCTCCTCCTACCACGGTTCCAAGTCTGACTAGCAAGGAGCTCATCTACTTGGGTCAAACCTCTGCAGTGCAGAAACCTGCAGAAGTGCAGCAGCCCAACTTGAGTGATTCATCCAAAAATCCTACAGAGTACACTTCGGCATTGAAAGCACTGAAATCTCTAGCCGAGTCATCCATTAGAGATCACATTGCTGAAACCCCTGAAAAGAGTCCTGAAACTGCAGTGAGACCTGCTGAAGCTGCAGTGAGACCTGCTGCAACTGTACCTGCTGAAGTGGCACCTACCAAGGAACCGGAATTCCTGCAACCTCCACCTCCAAAACCTGCCAAGGAGAATGCATTGATGTACCAGCAAAGCATACCAAATTACATTCAAAATGTGCAAAATCACCCTCAAAATGCCCATGATCAGGCATTGATGTACTCACACAATGTCTCCAATTACAATCAAAATGCACAGAGTCATCAAAGACCACCTCAGAATGCATTGATGTACCCACAAAATGTCTCAAATCACCCTCAAAATGCACATAGTCATCAAAATCACCCTCAGAATGCATTGATGTACTCGCCCAACGTCTCCAATTACAATCAAAATGCACCGAGTCATCAAAGACCACCTCAGAATGCACTGACTTACCCACTTAGCACTAATCCTACATCGTTGCCTCCTCACCAATCAACAGCGACTTTACACACTGCAGACCCTCCAACGAGAATCAATTTACCAGCAGCCAGTGAGAGCTCGATAGAAGCTGTTGCAAACAGTTCTCAAAACATATGGTCCATTGTCGAGAGCATCATAGAAGAGGAGACGTTGCGGGAGGCAAATTCAACTCGGCATGGTCTTGTAGAGAAGCTTGTGACTGAGAAACTAGCCCACGACAACGGGGAGACTTTACAAAAATCAAGTCACCAGGGGTTGACAGAGTTTATTGACAAACTAGGTCACAACGTTTTGATTGAGCCCGTATCCCCAGAAGTAAATAATAACCAAGCAGAAATTTCCATCACACCGATTGAGCCCATATCCCCAGAAGTAAATAATAACCAATCGGAAATTTCCATCACACCGATTGAGCCAGTCACAGAACCGTTGAAGCAAAAACGTAGGCGTCACCAGTCTGAAAActctctcaatcatgaatttgaATCTGTGAGCCACCTGACTATTCCAGACGAGGCTGCTACAAGTCACCAATCTGTAGATCACCATGACGAGCCAGCTAAAAAGTCACGGAAACGCCATCAATCCGAGAAAAGCAGTAAGAAAGCAAAAGAAATTGCATCGAGGAGAAGTAGTAGTGACGCCCATGTTGCTTACACCTCGCGACGACAAAGCGTGGAGGAGAAGTTACCCGACATGCCCCTGCTGAACGGTGACGATCCACGGGATGCAAACGATGACGATCAAGAAAACAATTTGAGCTCGATGTTTGAAACCCAAGAGATGACGATCCAATGCGTAAAGTGTGACCAGTACTTCACGGACTACAACGAACTGTTGGCTCACCACGAAGTGCACACTCAGTCTGAAATGTCATCGCAAGAACTGTCCAACTCTCAGATCTTGGAAGATATCAAGAACACGTTGAGTAGAACGGAGGTGGAAGATTATAGCTGCAGCTATTGCCGCAAAGTTTTTGGCAATCCGAGTGAAATGGAGGGTCACATCAGCACGTCCCACCTCGGGGTGAACATTTATCAGTGCATTCACTGCCCTAACCGCTTTAGTACCAAGAACAGGCTCAATAAGCACATGATGCAGAAGCACACGGGCAAGTACAGCTACGATTGCAACAACTGCGACAAGATCTTCATGACCAAGCTGGAGTTACTGAGACACAATTCTCAAAATCATCCCATGCCCAAGAAACCGTTGTACCATTGCACAGTGTGTCAGAAAGCGTTCAAAACCCACACAGGCGTGGAGAAGCATAGAGAAAAGGAGCATGGGATTGTGTCGGAGAACATTCCAGTCCTTGCCAATACCATCTCTGACCAGGCCATGAGGAATGTGTTTGACATGGTGAACCCTCAGCAAGGTCCTGTATGCTGCAAACACTGTACTGGAGAGTTCAACACTGTGGAGGAACTGAAATCACACTGCAGAAAAGCTCATAAACATTTGACTAGAAACAAAACTGTCAGTTGCAATTTTTGCagtgaaaaattcaaaaccaaGGAAGACCTGGACAAACACTGCAAGAAGACACACAAAAACGTGTCTGTTTTCGCCATCGTCAAGCCCAACAAACACACCATCAGTTGTAAATATTGCAGCGACAAGTTCAAAGACACGGAAGAACTCTACGTTCACTGCAAACGAATTCACAGACAGTTATGGTTCTGCAACGAGTGTCGTTTCTCAGCCAGCAAGGAGACCCAGCTGAAAACTCACAAACTGAAGCATGAATCATCCAGATTGGCAGAGGAGTTCCAAAAGTCGATGGAGGAAAGAGAGAAAGAGTGTTCGTTCCCTTGTCCTTACTGCAACTTAGATTTTGTTGACGATGATCAACGAGCAGCTCATTCCAACGAAGCACATGCCCAAGACTTGCCCTATCCGTGTGACGTTTGCCCCATGAGGCACACAACAGAAGAGTTGTACAATTTACATGCGTTCAGTCACGAGCCACCCAAATCTGCTCCTTCCTGCAATATATGTGACAAGACATTCAGTAAAACCTCTCTGTTGCAAGACCACATGAAGTGGCACGATGATTGTCAGGGCTGA
- Protein Sequence
- MAAVDAAESRGDTDSSSEEEEEEEDEKMLKSHQCRICGKVGDKGIPMLLPQRDKLREWIRKYLSVETIQDWITFHAQCQKTQRLNFPVPKNADAVDPLAVQPAPVQPAPVQPAPVQPVPVQPPHVNGDAAKSKQPEQPSPVQGEQPDAEKAVKSKQPEKPAAVQPEQHSSAKYKKPEKPREQPCSEKSKQSEQPSSDKFEQPSSAKHKQAPVEKPTATPDSSDNEVVSNSEDEMSPPKQQVASDSDSPVVKRTNRNRIISSSEEDSPNKSKPIKNVNLSLTARTRLNKRPVSPDETVPSKKFAGDLRLSGPVIQLKRLELDVNSSPIILSPSSSSSTIAAPSPAIMRRPTSSTKKRKRRSWSNKSSSGESESSGPATTNNAARPAENTSLLRGSNFSHPSAVAPPTTVPVAPPTAVISPVISQPSPVHNAPRMAGSPSTNNNGPQILNSFSLAQPTVQPPVRHFIVTTNQFQEPTVHQVIAPSQVRNQQQATVATTQLAQNQQQMRPVVQATVPTTQLAPNQQQARPVPQATVPTTQLAPNKQQTRPVAQAAVSTSQLAQNETRPATQNQQPTRPVSQTTQNQQPAQVTNVSARDQATPSKSIKNVDYETALSIRNHPKFNILTAEHKAKVMEVLANPPKVSQQSPEVIDLDDDDPPPTTVPSLTSKELIYLGQTSAVQKPAEVQQPNLSDSSKNPTEYTSALKALKSLAESSIRDHIAETPEKSPETAVRPAEAAVRPAATVPAEVAPTKEPEFLQPPPPKPAKENALMYQQSIPNYIQNVQNHPQNAHDQALMYSHNVSNYNQNAQSHQRPPQNALMYPQNVSNHPQNAHSHQNHPQNALMYSPNVSNYNQNAPSHQRPPQNALTYPLSTNPTSLPPHQSTATLHTADPPTRINLPAASESSIEAVANSSQNIWSIVESIIEEETLREANSTRHGLVEKLVTEKLAHDNGETLQKSSHQGLTEFIDKLGHNVLIEPVSPEVNNNQAEISITPIEPISPEVNNNQSEISITPIEPVTEPLKQKRRRHQSENSLNHEFESVSHLTIPDEAATSHQSVDHHDEPAKKSRKRHQSEKSSKKAKEIASRRSSSDAHVAYTSRRQSVEEKLPDMPLLNGDDPRDANDDDQENNLSSMFETQEMTIQCVKCDQYFTDYNELLAHHEVHTQSEMSSQELSNSQILEDIKNTLSRTEVEDYSCSYCRKVFGNPSEMEGHISTSHLGVNIYQCIHCPNRFSTKNRLNKHMMQKHTGKYSYDCNNCDKIFMTKLELLRHNSQNHPMPKKPLYHCTVCQKAFKTHTGVEKHREKEHGIVSENIPVLANTISDQAMRNVFDMVNPQQGPVCCKHCTGEFNTVEELKSHCRKAHKHLTRNKTVSCNFCSEKFKTKEDLDKHCKKTHKNVSVFAIVKPNKHTISCKYCSDKFKDTEELYVHCKRIHRQLWFCNECRFSASKETQLKTHKLKHESSRLAEEFQKSMEEREKECSFPCPYCNLDFVDDDQRAAHSNEAHAQDLPYPCDVCPMRHTTEELYNLHAFSHEPPKSAPSCNICDKTFSKTSLLQDHMKWHDDCQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -