Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ497692.1:1301500-1307836[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1 68 4.2 1.4 1 23 199 222 199 222 0.92

2 14 0.0038 0.26 11.8 0.9 2 23 228 250 227 251 0.92

3 14 0.0046 0.31 11.6 0.7 2 23 332 354 331 354 0.94

4 14 0.00053 0.036 14.5 3.6 1 23 360 382 360 382 0.96

5 14 0.0019 0.13 12.8 3.1 3 23 390 411 388 411 0.95

6 14 0.01 0.69 10.5 5.5 1 23 442 464 442 464 0.97

7 14 0.078 5.3 7.7 5.5 2 23 470 492 469 492 0.96

8 14 1.6 1.1e+02 3.6 1.7 1 22 498 521 498 522 0.85

9 14 0.092 6.2 7.5 2.5 3 23 543 563 542 563 0.98

10 14 3.1e-05 0.0021 18.4 0.5 2 23 571 592 570 592 0.96

11 14 0.00086 0.058 13.9 0.2 2 23 629 650 628 650 0.93

12 14 0.00021 0.014 15.8 1.8 1 23 656 679 656 679 0.93

13 14 0.0018 0.12 12.9 4.8 1 23 684 707 684 707 0.92

14 14 0.32 22 5.8 3.0 1 23 713 736 713 737 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1	68	4.2	1.4	1	23	199	222	199	222	0.92
2	14	0.0038	0.26	11.8	0.9	2	23	228	250	227	251	0.92
3	14	0.0046	0.31	11.6	0.7	2	23	332	354	331	354	0.94
4	14	0.00053	0.036	14.5	3.6	1	23	360	382	360	382	0.96
5	14	0.0019	0.13	12.8	3.1	3	23	390	411	388	411	0.95
6	14	0.01	0.69	10.5	5.5	1	23	442	464	442	464	0.97
7	14	0.078	5.3	7.7	5.5	2	23	470	492	469	492	0.96
8	14	1.6	1.1e+02	3.6	1.7	1	22	498	521	498	522	0.85
9	14	0.092	6.2	7.5	2.5	3	23	543	563	542	563	0.98
10	14	3.1e-05	0.0021	18.4	0.5	2	23	571	592	570	592	0.96
11	14	0.00086	0.058	13.9	0.2	2	23	629	650	628	650	0.93
12	14	0.00021	0.014	15.8	1.8	1	23	656	679	656	679	0.93
13	14	0.0018	0.12	12.9	4.8	1	23	684	707	684	707	0.92
14	14	0.32	22	5.8	3.0	1	23	713	736	713	737	0.95

Sequence Information

Coding Sequence: gtCAGAGATCGTTTGGCTGCAGAACCTGAAGACCATGCAAAGAGACCCAAGTTGGATGTAAACAATGAGGAAGCAATAGATGTACTCTCAGAAGTGGTGAACATaaacaacattgaaaatatCTGCAATGCAGCACCTGTTCATCATAGTGTACCTTCAAAGTTGGATTTGTGTCGCATATGTGCCCAAGCGCaggaaaatttaattggaatttttagtACAGAGGGAGAGACCAGAGGGATTGAATCTATGATAAATTCCATTTTACCAATCAAGGTTCTTGAGAGTGATCACCTGCCTTTGCAAGTGTGTTTACCTTGCATCTCATCCCTAGAGGCTGCTCAACAACTGTGCAAAACGAGTGTTTCCTCCGACATAATTCTGAGAGACCAGTTCACTCAGCCAGTACAGAATTCTTTGGATGCTGAGACAACCTCCTCAATGAAAACGCCAGAATCTGCCTTCAATGAAGACATTGGATCATCAGATGTTCAATCAATGCCCCAGCCATTACAGGTGGCTGAAGGTATTTGCAAAGTGGTGCAAATCAGCAAAGACCAAATCAACACAAATTATTGGATACCAGATACtgcatttcgttgtgatgaATGCAGTACTGCACTGCAGTCTTCATTAGCATACTCCAGGCACCATTTGCTGAAGCACAATAGAACTGTAATCCGCTGCcagaaatgtgatatttttttcgaTGAAAGAAAGCAGTTGAGAGCTCACTATGCAGAAATCCATCACTCTGAATCCCAAAACTCAGAGAAATTCCTTGGCAAAAATTTGATAAGGGTGAGCAGGCATCCAAGAATATTGAAAAATCATCCAACACAAGACAAGAATCTGAAAAGACCTAAGCGAACTCATTATGACTGTGGCAAATGTAAAATTAGTTTTCCTGTCGAGAAACATGTTGAATACCGTAATCACTTGCTTGAACATAAAAGAAAGGAAATGAAAGAAAGATTGCGTAATTCAAATATTCAGTGTGATTATTGTGATCAGAAGTTCGTTTCAGAAAAAAGCAAGTTGTCGCACATGCTACTATTTCACAAAGAATACAAACCATTTGTGTGTAAGCAATGTGACAAGCGGTATCATACCAAGATGAGTTATAAGAATCACATGGCTGCTCACAGTGGCAACGAAGCTCATTTATGTGATGTATGTGGATCTGTATTCTGCACTGCAGATCTACTCTACAAACACACTAAAAGTAAACACAAGACaagattttgtgatttttgtgaGCAACAGATTGGTGCAGACATTTTCAGATGTCATTTGGACAAGAAACATTTTGAAGAGCGCAAACATCGGTGTGAAATTTGTGGGCATAGCTTTTTTTTCACCAAAGAACTTGACAAGCACAGATTGCGCCACAAATCCAAAACTATTTATTGCTACTTTTgtcgtaaaatttttaattttcacgaGTCATTGCATTCACACCTCAAAACTTACCATCAAGACAATGACACATTTTCTTGTCCCATCAAAACATGCAAGAAACAGTTTGCTACTACAGTAGAAATTATAGATCATTGCAAAAATCATTCCCAAGATGACTTTCCTAAACCAAGAATAGGTGAGAGAGACAAAACGAAATTACTTCTTTGTCAATTCTGTAATGCTACTTATAGACACATGAACCAGTATATCATCCACTTGAAAAAACATAGTGTTGCAAATTATATTCTTGTTTGTAATATTTGCAAAACAACGTTTGCTAATGAAAAACTCCTGACAAAACATTTAGAATCACATATAGAGGCATATGATTTTGACTGTAGACACTGCATAGACACCTTTGTAACAGACACAGCACGAAATGTGCATGAAAAAATGGTGCACAGAAAACGAGGAAAAGTACAGCAGTGTCCAGAGTGTCCTAGAGCATTTTCTTCGGCTTGTGCATTGTTGGATCATTCCTATATTCATTCCAATGAAAGACGGTTTTCATGTCAATATTGTGGTATGAAATTTAAGAACCGAAAAGATATCCGAAAACATGTGGTGTCCCAGCATGAATTTGTAACACACAGTTGCACAGTTTGttccaaagaatttaaaaatgtacatgATCTaaagaaacattattataatgtgcatttaaaagaaaatatttacaaatgtgAGCATTGTGATTTTGATAGCAACATCAAGAAGGAAATTACTGAGCATATGCAATTAATGCATCACCTTGATGATGGAGATAGCAGTGATTAA
Protein Sequence: VRDRLAAEPEDHAKRPKLDVNNEEAIDVLSEVVNINNIENICNAAPVHHSVPSKLDLCRICAQAQENLIGIFSTEGETRGIESMINSILPIKVLESDHLPLQVCLPCISSLEAAQQLCKTSVSSDIILRDQFTQPVQNSLDAETTSSMKTPESAFNEDIGSSDVQSMPQPLQVAEGICKVVQISKDQINTNYWIPDTAFRCDECSTALQSSLAYSRHHLLKHNRTVIRCQKCDIFFDERKQLRAHYAEIHHSESQNSEKFLGKNLIRVSRHPRILKNHPTQDKNLKRPKRTHYDCGKCKISFPVEKHVEYRNHLLEHKRKEMKERLRNSNIQCDYCDQKFVSEKSKLSHMLLFHKEYKPFVCKQCDKRYHTKMSYKNHMAAHSGNEAHLCDVCGSVFCTADLLYKHTKSKHKTRFCDFCEQQIGADIFRCHLDKKHFEERKHRCEICGHSFFFTKELDKHRLRHKSKTIYCYFCRKIFNFHESLHSHLKTYHQDNDTFSCPIKTCKKQFATTVEIIDHCKNHSQDDFPKPRIGERDKTKLLLCQFCNATYRHMNQYIIHLKKHSVANYILVCNICKTTFANEKLLTKHLESHIEAYDFDCRHCIDTFVTDTARNVHEKMVHRKRGKVQQCPECPRAFSSACALLDHSYIHSNERRFSCQYCGMKFKNRKDIRKHVVSQHEFVTHSCTVCSKEFKNVHDLKKHYYNVHLKENIYKCEHCDFDSNIKKEITEHMQLMHHLDDGDSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -