Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ497618.1:1016817-1032651[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.9 1.9e+02 2.8 0.5 2 14 86 98 85 99 0.88

2 20 1.9 1.3e+02 3.3 1.1 3 21 112 130 111 133 0.81

3 20 0.069 4.6 7.9 0.4 1 23 141 164 141 164 0.95

4 20 3 2e+02 2.7 0.2 2 13 242 253 242 259 0.85

5 20 0.088 5.9 7.6 0.0 3 23 295 316 293 316 0.92

6 20 1.7 1.1e+02 3.5 0.4 1 23 534 557 534 557 0.90

7 20 0.03 2 9.0 1.3 1 23 596 619 596 619 0.98

8 20 0.3 20 5.9 0.4 2 23 634 656 633 656 0.94

9 20 0.013 0.87 10.2 7.0 1 23 662 685 662 685 0.97

10 20 0.63 42 4.9 0.1 3 23 693 714 692 714 0.96

11 20 0.028 1.9 9.1 2.4 1 23 722 745 722 745 0.93

12 20 0.00083 0.056 13.9 0.7 1 23 751 773 751 773 0.96

13 20 2.3e-06 0.00015 22.0 0.7 2 23 780 801 779 801 0.97

14 20 5.6e-08 3.8e-06 27.1 2.5 1 23 806 828 806 828 0.98

15 20 0.00036 0.024 15.1 2.8 1 23 834 856 834 856 0.99

16 20 1.3e-05 0.00089 19.6 4.8 2 23 863 884 862 884 0.96

17 20 3.5e-05 0.0023 18.3 0.2 2 23 891 912 890 912 0.95

18 20 2.4e-05 0.0016 18.7 0.0 2 23 919 941 918 941 0.94

19 20 9.2e-07 6.2e-05 23.2 1.0 1 23 947 969 947 969 0.98

20 20 0.0019 0.13 12.8 0.8 2 23 976 998 975 998 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.9	1.9e+02	2.8	0.5	2	14	86	98	85	99	0.88
2	20	1.9	1.3e+02	3.3	1.1	3	21	112	130	111	133	0.81
3	20	0.069	4.6	7.9	0.4	1	23	141	164	141	164	0.95
4	20	3	2e+02	2.7	0.2	2	13	242	253	242	259	0.85
5	20	0.088	5.9	7.6	0.0	3	23	295	316	293	316	0.92
6	20	1.7	1.1e+02	3.5	0.4	1	23	534	557	534	557	0.90
7	20	0.03	2	9.0	1.3	1	23	596	619	596	619	0.98
8	20	0.3	20	5.9	0.4	2	23	634	656	633	656	0.94
9	20	0.013	0.87	10.2	7.0	1	23	662	685	662	685	0.97
10	20	0.63	42	4.9	0.1	3	23	693	714	692	714	0.96
11	20	0.028	1.9	9.1	2.4	1	23	722	745	722	745	0.93
12	20	0.00083	0.056	13.9	0.7	1	23	751	773	751	773	0.96
13	20	2.3e-06	0.00015	22.0	0.7	2	23	780	801	779	801	0.97
14	20	5.6e-08	3.8e-06	27.1	2.5	1	23	806	828	806	828	0.98
15	20	0.00036	0.024	15.1	2.8	1	23	834	856	834	856	0.99
16	20	1.3e-05	0.00089	19.6	4.8	2	23	863	884	862	884	0.96
17	20	3.5e-05	0.0023	18.3	0.2	2	23	891	912	890	912	0.95
18	20	2.4e-05	0.0016	18.7	0.0	2	23	919	941	918	941	0.94
19	20	9.2e-07	6.2e-05	23.2	1.0	1	23	947	969	947	969	0.98
20	20	0.0019	0.13	12.8	0.8	2	23	976	998	975	998	0.94

Sequence Information

Coding Sequence: ATGTACCAGCAAGGCACCAGCAGTGTGGCAGACTACTCGTGGCCGGAGCAGGACGACAGCGAGGAGAGCGAGGAGGAAGAAGAGGATGACGAGGAATGTGGCGTGTGTGGACAGAGCAGCTGCGAGTGTGGGGACCTGGCCGCACTGCTACTCGCTCAGCCCCAAGCCCCGCCCTTCCCCTGCACAGCGTGTCACCAATGGTTCGTGGTGCACGACAAACTGGTGCTGCACCTCGTGCTCAACCACTCCATGGTCTACTGCAAGTTCTGTAAAAAGCTATTCACCTCGCAGGCTGAACACACGGTATGCACCTCACACCCAGGCTCTGCACCATGCAGCACCTGTGGCTTGCAGTTCCGCACCGACTCGTCAACATGCGGACACGAACTGGCCCAACACGAAGCCAGAGTTCACGACGCTCACGCCTGCCCTCTATGTGGGGTGACCCTTCAACCTCATGACGCACTGGTCCAACATGTCAGACGCCGACATTTGTGTGAAAACTTGCCAGAACTCTCCACCTTGGGTCTGATCTCCGAGTCTCCAGACAACACCTGGGCGTTCCAGTGTCGACTGTGCGACCAGCAGACCCCTCGCTCAGATCTGTTCACCCACTTCCACTCCCACCATCGTCTGTCCTTACCGTGCCTCATAGAGCTTCTCCACTGTGGCAGAACCTTCATTCCAGTCTCGGGATACCAGTCAGACCCACCTCAGGAAGGTACCTGCACCGTCTGCTCAAGATCGTATACATCTCTGGTGCCCAAGACAGTCCACGATGTCCTGTGTTCCGGAATGGGTTACTGTCAGTATTGCAGTGTGTCATTTCCATCTGGACTGGCCAGGGAGTTGCATGTGGTGAGGGCCCACAGTTCTCTGCCCTGTGTAGCGTGTGGAGAGAGCTTCCCGGCGGAGACAAGTCTGACAGCACATCATGCCAGAGCTCACGGGTCAGTGCTGTGTTGTTGCTGTGATGCTCTGGTGGCACCCACAGATCTGCAGGACCATCTAGCCACTCGCCATGCTTGTCGCGCCCTTCCCCCCACCCCTCAGCAGGCACAACAAGAGGGCATGATGTGCTGCTCGTTGTGTGAGGAACGTTTCTGCTCCAACCAGACTGCCACCTCGCTGTTCTCCCACCTGTGCCAGCAACATGCCGTCGTCCCAGCAAAGGCTCTCAACTTGCTACTcacccagcagcagcaggtgaAGAATGAGGAGCCAGCAGCAGCTGAGCCGAGTGAAACGCTGACCTTCCCCACTGACCCTGAGTGGCCGGGGTGTGAGGAGGAGGAAGTGGTGGTGCCCCAAGTGGACCTGCCCAGCTCTGAGGAGAGTGAGGACGTCGCAGGCTGCAGCTCAGACGAGGGAGACGACATCTCACAGCACGGAGAGCCCGAGGTGGACCCCGAGGACGTGGACTGTGTCTCGGACTCAAGTGACGACGAGGATGTGGCCGTGGCCAGACTGGCCTGTGAACTCTGCACCGAGTCTGCGCTGGGCTCTCCCAGAGCGCTGTGTGCCCACTTGCATGCAGCACACAGAATGCATTGGGACAGGAAGGCAGCAGTCAATGATACAGCAGTAGCGGACACACATTATGCTTGCCACAGGTGCAACCATGGAGCAGGCGACAAACTGTCGCTGGCCAGACACTGGGCTCAGGCACACCCTGGTGAAGGGAAAGGCGGGTCTCGCTGTCTTTATTGTCCTCAGAGGTTCCTGCAGTCCCCCATCAAAGACCAACACCAACTGAGCTCCCACGCAGAGCATCAACGCAGCTTCTACCGGTGCCCTTTCTGCCAGATGCTCTCCTCCAGCACGGCCGTACTGCGTCACCATCTGAGGACAGTCCATCCTCTGCAAGAAACGGAGCGTCCCCATACTGGTGTGAATCTCAAGTGCCGGGTGTGTCTGCTGCTGTTCCGTGACATGACGGAGCTACGTGCCCACTTCCGTGCCACCCACCCTGCAGCCATGGTGTTTCGTTGTCGTCACTGTGGTGCTCACCTGAAAACTCGCAAGACCCTGAGACATCACCTGAAAGTGGTGCATGCAGAGGCGAGGCGTAGAGACTGCGCTACGTGTGGCAAAGTGCTCTGGAGCAAGCGAGCCTATGCCATTCACTATCGTATGAAGCATAGCAAGACGTCCAAGGTTGGGTTTAGATGTCGTATCTGTCAGCAGCGTTTCGACACCAAGGAACAGAGAAAACTTCACTACACTCTGGACCACGAAGGAGAAAGTCCGTATCACTGTGCGGACTGTGGCAAGGGATTCGCCAGCAAGTCCGGAATGTATGGTCACAGACAGCTCCACACGGGCTCTGGAGTTAGCAAGTGTGAATACTGTGGCAAGGAATTCACGAGGAAAGACAGCTACAATGAGCACCTGTTGATCCACAATGGCCCCAGACACAAGTGTCCACACTGTCCAAAAGAGTTTGTCCAGAGGTCCAACCTGGTGCGCCATATCAGAATCCATACAGGTGAGAAGCCGTATCAGTGTACGTTCTGTGAGAAGCGTTTCTCGGACAAAGGTGCTTGCAACTCTCACATTCGTGTTCACACCCGGGAGGAGACATGCAGCTGCCCATATTGTGGACAGACTTTCTCTAAGAAACAGAAACTCAAGTACCACATCCGCAAGCATACTGGGGAAGGACTCATCGAGTGTGAAATTTGCAATAAGATGTTCACCAACAGCTTTGCGCTGAAGGAACACCGTGTGATCCACAACCGTCAGACCCAGGTGGTTTGTCCGCAGTGTGGCAAGGGTTTCAACTCTGAGAAGTACCTGCAGCGTCACGTGGCTATCGTGCATGAGCCTTCCAATGCTTTCTCCTGTCCTCTgtGCAAGAAGACATTTTCTCAGCAAGCGAGGCTCAAAGCTCATCTCATGACCCACTCGGGAGTGAAACACATGAAGTGCTTGCTCTGTGAGAAAGCCTACTCTGTCCGCAAGTCACTGCGCAGACATTTGCTGGAGAAGCATGAGGTGAGCCCCGAGCATCCACAGTACAAGCACTGTTTCCACGCCATGTCTCCTGAGGAGGCTGGGATCGAGGGTCTGACTGCCGCCACCTCGCTGTCCACCACCTCTCCTCGACGCTCCCCCAAGCGGGAACCTCCCGGCTCCACACGCAAACGCCGCAGAGTGGAGCAGATCGTGCAGTCGTTGCAGCACTCGTTGCAGGCGGAGCCCAGTTCCAGCTCGACCCCCACCCTTGCTCGCATCAACCCTCTGGTGGTCAACATGCCTCGGGGGAGAAAACGAGGACGTCCAGCGCCCCCGCCAATGTCCAGCGAGGACAGTTCTAGCGACAACGAAGGGGAGGGACTCAACCTGACTGTTGGCAAGACTGACAGCGATAGCTGA
Protein Sequence: MYQQGTSSVADYSWPEQDDSEESEEEEEDDEECGVCGQSSCECGDLAALLLAQPQAPPFPCTACHQWFVVHDKLVLHLVLNHSMVYCKFCKKLFTSQAEHTVCTSHPGSAPCSTCGLQFRTDSSTCGHELAQHEARVHDAHACPLCGVTLQPHDALVQHVRRRHLCENLPELSTLGLISESPDNTWAFQCRLCDQQTPRSDLFTHFHSHHRLSLPCLIELLHCGRTFIPVSGYQSDPPQEGTCTVCSRSYTSLVPKTVHDVLCSGMGYCQYCSVSFPSGLARELHVVRAHSSLPCVACGESFPAETSLTAHHARAHGSVLCCCCDALVAPTDLQDHLATRHACRALPPTPQQAQQEGMMCCSLCEERFCSNQTATSLFSHLCQQHAVVPAKALNLLLTQQQQVKNEEPAAAEPSETLTFPTDPEWPGCEEEEVVVPQVDLPSSEESEDVAGCSSDEGDDISQHGEPEVDPEDVDCVSDSSDDEDVAVARLACELCTESALGSPRALCAHLHAAHRMHWDRKAAVNDTAVADTHYACHRCNHGAGDKLSLARHWAQAHPGEGKGGSRCLYCPQRFLQSPIKDQHQLSSHAEHQRSFYRCPFCQMLSSSTAVLRHHLRTVHPLQETERPHTGVNLKCRVCLLLFRDMTELRAHFRATHPAAMVFRCRHCGAHLKTRKTLRHHLKVVHAEARRRDCATCGKVLWSKRAYAIHYRMKHSKTSKVGFRCRICQQRFDTKEQRKLHYTLDHEGESPYHCADCGKGFASKSGMYGHRQLHTGSGVSKCEYCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYQCTFCEKRFSDKGACNSHIRVHTREETCSCPYCGQTFSKKQKLKYHIRKHTGEGLIECEICNKMFTNSFALKEHRVIHNRQTQVVCPQCGKGFNSEKYLQRHVAIVHEPSNAFSCPLCKKTFSQQARLKAHLMTHSGVKHMKCLLCEKAYSVRKSLRRHLLEKHEVSPEHPQYKHCFHAMSPEEAGIEGLTAATSLSTTSPRRSPKREPPGSTRKRRRVEQIVQSLQHSLQAEPSSSSTPTLARINPLVVNMPRGRKRGRPAPPPMSSEDSSSDNEGEGLNLTVGKTDSDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -